Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 SNORA22C-201ENST00000384614 134 ntBASIC1.07□□□□□ -2.24
HPF1Q9NWY4 RNU6-910P-201ENST00000390844 107 ntBASIC1.07□□□□□ -2.24
HPF1Q9NWY4 DEFB108C-201ENST00000400154 252 ntBASIC1.07□□□□□ -2.24
HPF1Q9NWY4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.07□□□□□ -2.24
HPF1Q9NWY4 SEPT14P3-201ENST00000439401 183 ntBASIC1.07□□□□□ -2.24
HPF1Q9NWY4 AL732372.2-207ENST00000445840 183 ntBASIC1.07□□□□□ -2.24
HPF1Q9NWY4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.07□□□□□ -2.24
HPF1Q9NWY4 SEPT14P2-201ENST00000453405 183 ntBASIC1.07□□□□□ -2.24
HPF1Q9NWY4 AC010486.3-201ENST00000511602 785 ntBASIC1.07□□□□□ -2.24
HPF1Q9NWY4 SEPT14P4-201ENST00000513445 186 ntBASIC1.07□□□□□ -2.24
HPF1Q9NWY4 ACA59.1-201ENST00000515966 143 ntBASIC1.07□□□□□ -2.24
HPF1Q9NWY4 FO082796.1-201ENST00000523795 183 ntBASIC1.07□□□□□ -2.24
HPF1Q9NWY4 AC027288.2-201ENST00000553028 243 ntBASIC1.07□□□□□ -2.24
HPF1Q9NWY4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.07□□□□□ -2.24
HPF1Q9NWY4 MIR3611-201ENST00000584484 83 ntBASIC1.07□□□□□ -2.24
HPF1Q9NWY4 Y_RNA.238-201ENST00000364441 102 ntBASIC1.06□□□□□ -2.24
HPF1Q9NWY4 SNORA25.9-201ENST00000365087 128 ntBASIC1.06□□□□□ -2.24
HPF1Q9NWY4 Y_RNA.415-201ENST00000384012 112 ntBASIC1.06□□□□□ -2.24
HPF1Q9NWY4 RNU6-793P-201ENST00000384233 104 ntBASIC1.06□□□□□ -2.24
HPF1Q9NWY4 MTCO3P40-201ENST00000392516 676 ntBASIC1.06□□□□□ -2.24
HPF1Q9NWY4 AL445305.1-201ENST00000432577 575 ntBASIC1.06□□□□□ -2.24
HPF1Q9NWY4 STAG3L5P-204ENST00000443759 179 ntBASIC1.06□□□□□ -2.24
HPF1Q9NWY4 RPS29P29-201ENST00000456396 171 ntBASIC1.06□□□□□ -2.24
HPF1Q9NWY4 TRBVA-201ENST00000498804 316 ntBASIC1.06□□□□□ -2.24
HPF1Q9NWY4 AC090821.2-201ENST00000523552 176 ntBASIC1.06□□□□□ -2.24
HPF1Q9NWY4 MIR4438-201ENST00000585271 93 ntBASIC1.06□□□□□ -2.24
HPF1Q9NWY4 MIR4295-201ENST00000585286 85 ntBASIC1.06□□□□□ -2.24
HPF1Q9NWY4 7SK.7-201ENST00000603504 247 ntBASIC1.06□□□□□ -2.24
HPF1Q9NWY4 RN7SKP299-201ENST00000606679 301 ntBASIC1.06□□□□□ -2.24
HPF1Q9NWY4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.06□□□□□ -2.24
HPF1Q9NWY4 AC099654.12-201ENST00000639868 649 ntBASIC1.06□□□□□ -2.24
HPF1Q9NWY4 AC018630.2-201ENST00000534866 2403 ntBASIC1.06□□□□□ -2.24
HPF1Q9NWY4 MTND5P26-201ENST00000426018 1752 ntBASIC1.06□□□□□ -2.24
HPF1Q9NWY4 AP000568.1-201ENST00000282964 442 ntBASIC1.05□□□□□ -2.24
HPF1Q9NWY4 RNU6-199P-201ENST00000362954 107 ntBASIC1.05□□□□□ -2.24
HPF1Q9NWY4 MIR19B1-201ENST00000384829 87 ntBASIC1.05□□□□□ -2.24
HPF1Q9NWY4 SNORA12.1-201ENST00000390873 148 ntBASIC1.05□□□□□ -2.24
HPF1Q9NWY4 RNU6-1068P-201ENST00000410958 103 ntBASIC1.05□□□□□ -2.24
HPF1Q9NWY4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.05□□□□□ -2.24
HPF1Q9NWY4 POLR2J4-204ENST00000418424 324 ntBASIC1.05□□□□□ -2.24
HPF1Q9NWY4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.05□□□□□ -2.24
HPF1Q9NWY4 COX6CP14-201ENST00000469580 174 ntBASIC1.05□□□□□ -2.24
HPF1Q9NWY4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.05□□□□□ -2.24
HPF1Q9NWY4 Y_RNA.693-201ENST00000516641 110 ntBASIC1.05□□□□□ -2.24
HPF1Q9NWY4 ZNF519P2-201ENST00000557032 169 ntBASIC1.05□□□□□ -2.24
HPF1Q9NWY4 FRG2DP-202ENST00000566967 323 ntBASIC1.05□□□□□ -2.24
HPF1Q9NWY4 MIR4778-201ENST00000577635 80 ntBASIC1.05□□□□□ -2.24
HPF1Q9NWY4 AL359880.1-201ENST00000621879 266 ntBASIC1.05□□□□□ -2.24
HPF1Q9NWY4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
HPF1Q9NWY4 SNORD12-201ENST00000391002 90 ntBASIC1.04□□□□□ -2.24
HPF1Q9NWY4 RNU11-5P-201ENST00000391216 129 ntBASIC1.04□□□□□ -2.24
HPF1Q9NWY4 AC063976.4-201ENST00000421971 163 ntBASIC1.04□□□□□ -2.24
HPF1Q9NWY4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.04□□□□□ -2.24
HPF1Q9NWY4 AC091179.3-201ENST00000474761 144 ntBASIC1.04□□□□□ -2.24
HPF1Q9NWY4 AC087343.1-201ENST00000477341 475 ntBASIC1.04□□□□□ -2.24
HPF1Q9NWY4 AC048334.1-201ENST00000477975 159 ntBASIC1.04□□□□□ -2.24
HPF1Q9NWY4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.04□□□□□ -2.24
HPF1Q9NWY4 RNU6-322P-201ENST00000516010 103 ntBASIC1.04□□□□□ -2.24
HPF1Q9NWY4 AK6P2-201ENST00000549020 471 ntBASIC1.04□□□□□ -2.24
HPF1Q9NWY4 AL512360.1-201ENST00000555346 234 ntBASIC1.04□□□□□ -2.24
HPF1Q9NWY4 PIGPP4-201ENST00000584447 307 ntBASIC1.04□□□□□ -2.24
HPF1Q9NWY4 AC080078.3-201ENST00000605407 463 ntBASIC1.04□□□□□ -2.24
HPF1Q9NWY4 AC068137.4-201ENST00000638485 296 ntBASIC1.04□□□□□ -2.24
HPF1Q9NWY4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.04□□□□□ -2.24
HPF1Q9NWY4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.03□□□□□ -2.24
HPF1Q9NWY4 Y_RNA.184-201ENST00000363884 108 ntBASIC1.03□□□□□ -2.24
HPF1Q9NWY4 Y_RNA.373-201ENST00000365600 103 ntBASIC1.03□□□□□ -2.24
HPF1Q9NWY4 RNU6-95P-201ENST00000384697 107 ntBASIC1.03□□□□□ -2.24
HPF1Q9NWY4 MIR517A-201ENST00000385001 87 ntBASIC1.03□□□□□ -2.24
HPF1Q9NWY4 AL451046.2-201ENST00000403074 277 ntBASIC1.03□□□□□ -2.24
HPF1Q9NWY4 RPL30P16-201ENST00000419341 429 ntBASIC1.03□□□□□ -2.24
HPF1Q9NWY4 MRPS10P1-201ENST00000448483 130 ntBASIC1.03□□□□□ -2.24
HPF1Q9NWY4 RPS27P22-201ENST00000478056 241 ntBASIC1.03□□□□□ -2.24
HPF1Q9NWY4 RNU6-405P-201ENST00000516637 110 ntBASIC1.03□□□□□ -2.24
HPF1Q9NWY4 RNA5SP102-201ENST00000516865 106 ntBASIC1.03□□□□□ -2.24
HPF1Q9NWY4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.03□□□□□ -2.24
HPF1Q9NWY4 MTND3P12-201ENST00000559068 328 ntBASIC1.03□□□□□ -2.24
HPF1Q9NWY4 MTND1P15-201ENST00000579262 949 ntBASIC1.03□□□□□ -2.24
HPF1Q9NWY4 AC010620.1-201ENST00000601088 1102 ntBASIC1.03□□□□□ -2.24
HPF1Q9NWY4 AC006435.5-201ENST00000624486 112 ntBASIC1.03□□□□□ -2.24
HPF1Q9NWY4 Y_RNA.179-201ENST00000363844 90 ntBASIC1.02□□□□□ -2.25
HPF1Q9NWY4 RNU6-259P-201ENST00000383999 107 ntBASIC1.02□□□□□ -2.25
HPF1Q9NWY4 RNA5SP247-201ENST00000411181 105 ntBASIC1.02□□□□□ -2.25
HPF1Q9NWY4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.02□□□□□ -2.25
HPF1Q9NWY4 AL591704.2-201ENST00000421658 181 ntBASIC1.02□□□□□ -2.25
HPF1Q9NWY4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.02□□□□□ -2.25
HPF1Q9NWY4 AC245047.7-201ENST00000440265 293 ntBASIC1.02□□□□□ -2.25
HPF1Q9NWY4 MTND4P18-201ENST00000447010 465 ntBASIC1.02□□□□□ -2.25
HPF1Q9NWY4 Y_RNA.665-201ENST00000516177 98 ntBASIC1.02□□□□□ -2.25
HPF1Q9NWY4 SCARNA16.2-201ENST00000516520 172 ntBASIC1.02□□□□□ -2.25
HPF1Q9NWY4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.02□□□□□ -2.25
HPF1Q9NWY4 AC010525.2-201ENST00000590920 195 ntBASIC1.02□□□□□ -2.25
HPF1Q9NWY4 AL357312.1-201ENST00000603879 298 ntBASIC1.02□□□□□ -2.25
HPF1Q9NWY4 AC124864.2-201ENST00000624736 186 ntBASIC1.02□□□□□ -2.25
HPF1Q9NWY4 RNU6-1252P-201ENST00000363054 104 ntBASIC1.01□□□□□ -2.25
HPF1Q9NWY4 Y_RNA.372-201ENST00000365599 102 ntBASIC1.01□□□□□ -2.25
HPF1Q9NWY4 MIR499A-201ENST00000384903 122 ntBASIC1.01□□□□□ -2.25
HPF1Q9NWY4 RNU6-159P-201ENST00000391080 106 ntBASIC1.01□□□□□ -2.25
HPF1Q9NWY4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.01□□□□□ -2.25
HPF1Q9NWY4 RPS29P28-201ENST00000446439 141 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms