Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC245047.7-201ENST00000440265 293 ntBASIC0.77□□□□□ -2.29
CLN6Q9NWW5 DAP3P1-201ENST00000441522 278 ntBASIC0.77□□□□□ -2.29
CLN6Q9NWW5 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.77□□□□□ -2.29
CLN6Q9NWW5 AC091179.3-201ENST00000474761 144 ntBASIC0.77□□□□□ -2.29
CLN6Q9NWW5 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.77□□□□□ -2.29
CLN6Q9NWW5 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
CLN6Q9NWW5 RNU6-947P-201ENST00000516264 106 ntBASIC0.77□□□□□ -2.29
CLN6Q9NWW5 AK6P2-201ENST00000549020 471 ntBASIC0.77□□□□□ -2.29
CLN6Q9NWW5 AL158209.2-201ENST00000619266 216 ntBASIC0.77□□□□□ -2.29
CLN6Q9NWW5 MIR3974-201ENST00000637126 96 ntBASIC0.77□□□□□ -2.29
CLN6Q9NWW5 RNU6-137P-201ENST00000363680 108 ntBASIC0.76□□□□□ -2.29
CLN6Q9NWW5 SNORD114-24-201ENST00000365029 72 ntBASIC0.76□□□□□ -2.29
CLN6Q9NWW5 MIR532-201ENST00000385025 91 ntBASIC0.76□□□□□ -2.29
CLN6Q9NWW5 DEFB108C-201ENST00000400154 252 ntBASIC0.76□□□□□ -2.29
CLN6Q9NWW5 AL451046.2-201ENST00000403074 277 ntBASIC0.76□□□□□ -2.29
CLN6Q9NWW5 RNU6-1068P-201ENST00000410958 103 ntBASIC0.76□□□□□ -2.29
CLN6Q9NWW5 RPL30P16-201ENST00000419341 429 ntBASIC0.76□□□□□ -2.29
CLN6Q9NWW5 NDUFA5P4-201ENST00000436704 385 ntBASIC0.76□□□□□ -2.29
CLN6Q9NWW5 MRPS10P1-201ENST00000448483 130 ntBASIC0.76□□□□□ -2.29
CLN6Q9NWW5 RPS27P22-201ENST00000478056 241 ntBASIC0.76□□□□□ -2.29
CLN6Q9NWW5 ACA59.1-201ENST00000515966 143 ntBASIC0.76□□□□□ -2.29
CLN6Q9NWW5 RNU6-322P-201ENST00000516010 103 ntBASIC0.76□□□□□ -2.29
CLN6Q9NWW5 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
CLN6Q9NWW5 RNA5SP168-201ENST00000516642 112 ntBASIC0.76□□□□□ -2.29
CLN6Q9NWW5 RN7SKP49-201ENST00000516675 260 ntBASIC0.76□□□□□ -2.29
CLN6Q9NWW5 AC027419.1-201ENST00000522976 328 ntBASIC0.76□□□□□ -2.29
CLN6Q9NWW5 AC090049.2-201ENST00000550377 109 ntBASIC0.76□□□□□ -2.29
CLN6Q9NWW5 AC211469.2-201ENST00000605461 205 ntBASIC0.76□□□□□ -2.29
CLN6Q9NWW5 AC068137.3-201ENST00000639191 341 ntBASIC0.76□□□□□ -2.29
CLN6Q9NWW5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CLN6Q9NWW5 Y_RNA.373-201ENST00000365600 103 ntBASIC0.75□□□□□ -2.29
CLN6Q9NWW5 SNORD41-201ENST00000386967 70 ntBASIC0.75□□□□□ -2.29
CLN6Q9NWW5 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.75□□□□□ -2.29
CLN6Q9NWW5 AC002429.1-201ENST00000437672 148 ntBASIC0.75□□□□□ -2.29
CLN6Q9NWW5 RPL39P39-201ENST00000455840 151 ntBASIC0.75□□□□□ -2.29
CLN6Q9NWW5 SNORD124-201ENST00000459577 104 ntBASIC0.75□□□□□ -2.29
CLN6Q9NWW5 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.75□□□□□ -2.29
CLN6Q9NWW5 PDCD5P2-201ENST00000507570 312 ntBASIC0.75□□□□□ -2.29
CLN6Q9NWW5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.75□□□□□ -2.29
CLN6Q9NWW5 AC023157.2-201ENST00000540596 141 ntBASIC0.75□□□□□ -2.29
CLN6Q9NWW5 ZNF519P2-201ENST00000557032 169 ntBASIC0.75□□□□□ -2.29
CLN6Q9NWW5 UBL5P4-201ENST00000562584 236 ntBASIC0.75□□□□□ -2.29
CLN6Q9NWW5 AC068790.6-201ENST00000602558 258 ntBASIC0.75□□□□□ -2.29
CLN6Q9NWW5 7SK.7-201ENST00000603504 247 ntBASIC0.75□□□□□ -2.29
CLN6Q9NWW5 FAM71BP1-201ENST00000604431 523 ntBASIC0.75□□□□□ -2.29
CLN6Q9NWW5 AC080078.3-201ENST00000605407 463 ntBASIC0.75□□□□□ -2.29
CLN6Q9NWW5 RNU6-1252P-201ENST00000363054 104 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 Y_RNA.124-201ENST00000363339 93 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 Y_RNA.179-201ENST00000363844 90 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 Y_RNA.184-201ENST00000363884 108 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 Y_RNA.265-201ENST00000364677 108 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 Y_RNA.372-201ENST00000365599 102 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 RNU6-1119P-201ENST00000384349 108 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 RNU6-95P-201ENST00000384697 107 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 MIR517A-201ENST00000385001 87 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 MIR653-201ENST00000385279 96 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 RNU6-159P-201ENST00000391080 106 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 MTCO3P40-201ENST00000392516 676 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 AL355796.1-201ENST00000406706 323 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 SEPT14P3-201ENST00000439401 183 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 AL732372.2-207ENST00000445840 183 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 MTND4P18-201ENST00000447010 465 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 SEPT14P2-201ENST00000453405 183 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.74□□□□□ -2.29
CLN6Q9NWW5 SEPT14P4-201ENST00000513445 186 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 SNORD79.1-201ENST00000516069 84 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 FO082796.1-201ENST00000523795 183 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 AL512360.1-201ENST00000555346 234 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 PIGPP4-201ENST00000584447 307 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 MIR3611-201ENST00000584484 83 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 AC010620.1-201ENST00000601088 1102 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 AC080078.2-201ENST00000603766 501 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 AL357312.1-201ENST00000603879 298 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 RN7SKP299-201ENST00000606679 301 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 AC009248.2-201ENST00000619826 254 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.74□□□□□ -2.29
CLN6Q9NWW5 AC006435.5-201ENST00000624486 112 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 AC068137.4-201ENST00000638485 296 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 MTND5P26-201ENST00000426018 1752 ntBASIC0.74□□□□□ -2.29
CLN6Q9NWW5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.74□□□□□ -2.29
CLN6Q9NWW5 Y_RNA.100-201ENST00000363141 102 ntBASIC0.73□□□□□ -2.29
CLN6Q9NWW5 RNU6-53P-201ENST00000365367 106 ntBASIC0.73□□□□□ -2.29
CLN6Q9NWW5 RNU11-5P-201ENST00000391216 129 ntBASIC0.73□□□□□ -2.29
CLN6Q9NWW5 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.73□□□□□ -2.29
CLN6Q9NWW5 AL590632.1-201ENST00000424289 371 ntBASIC0.73□□□□□ -2.29
CLN6Q9NWW5 CALM2P4-201ENST00000430810 426 ntBASIC0.73□□□□□ -2.29
CLN6Q9NWW5 SNORD65B-201ENST00000459126 73 ntBASIC0.73□□□□□ -2.29
CLN6Q9NWW5 COX6CP14-201ENST00000469580 174 ntBASIC0.73□□□□□ -2.29
CLN6Q9NWW5 RPL30P10-201ENST00000488148 337 ntBASIC0.73□□□□□ -2.29
CLN6Q9NWW5 AC010469.2-201ENST00000496412 480 ntBASIC0.73□□□□□ -2.29
CLN6Q9NWW5 TRBVA-201ENST00000498804 316 ntBASIC0.73□□□□□ -2.29
CLN6Q9NWW5 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.73□□□□□ -2.29
CLN6Q9NWW5 Y_RNA.665-201ENST00000516177 98 ntBASIC0.73□□□□□ -2.29
CLN6Q9NWW5 Y_RNA.693-201ENST00000516641 110 ntBASIC0.73□□□□□ -2.29
CLN6Q9NWW5 RNU6-107P-201ENST00000516643 102 ntBASIC0.73□□□□□ -2.29
CLN6Q9NWW5 CBX3P8-201ENST00000532412 525 ntBASIC0.73□□□□□ -2.29
CLN6Q9NWW5 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.73□□□□□ -2.29
CLN6Q9NWW5 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.73□□□□□ -2.29
CLN6Q9NWW5 MTND1P15-201ENST00000579262 949 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 244.7 ms