Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 RNA5SP119-201ENST00000362715 117 ntBASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 RNU6-655P-201ENST00000362858 107 ntBASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 RNU6-1292P-201ENST00000383856 107 ntBASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 RNA5SP306-201ENST00000411087 107 ntBASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 AC007064.1-201ENST00000412238 351 ntBASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 SNORD11-201ENST00000459124 84 ntBASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 SNORD65B-201ENST00000459126 73 ntBASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 OR9P1P-201ENST00000496431 281 ntBASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 MIR5685-201ENST00000579080 79 ntBASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 Pinc.1-201ENST00000616452 154 ntBASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 AL035470.1-201ENST00000622571 220 ntBASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 Y_RNA.66-201ENST00000362862 102 ntBASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 SNORA63.5-201ENST00000363548 123 ntBASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 RNY1P7-201ENST00000384743 110 ntBASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 MIR300-201ENST00000401138 83 ntBASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 RNU6-592P-201ENST00000411333 103 ntBASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 AC002075.2-201ENST00000425207 252 ntBASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 AC063976.3-201ENST00000426849 329 ntBASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 MTATP8P2-201ENST00000435212 202 ntBASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 RN7SL601P-201ENST00000471221 293 ntBASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 RNA5SP112-201ENST00000515937 99 ntBASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 SCARNA11.3-201ENST00000517276 130 ntBASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 AC107934.2-201ENST00000518653 310 ntBASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 AC015720.1-201ENST00000565251 277 ntBASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 AC007179.3-201ENST00000604976 235 ntBASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 AL137067.1-201ENST00000615933 120 ntBASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 AC006435.5-201ENST00000624486 112 ntBASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 AC012442.3-202ENST00000636742 206 ntBASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 MIR7515-201ENST00000637837 67 ntBASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CUEDC1Q9NWM3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 RNA5SP322-201ENST00000363617 119 ntBASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 RNY4P6-201ENST00000363667 96 ntBASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 MIR562-201ENST00000384894 95 ntBASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 MIR634-201ENST00000385208 97 ntBASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 AL590004.2-201ENST00000404787 371 ntBASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 AL138878.1-201ENST00000405131 347 ntBASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 RNU7-57P-201ENST00000459540 60 ntBASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 SNORA74D-201ENST00000516404 141 ntBASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 RNU7-149P-201ENST00000516739 59 ntBASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 MIR4298-201ENST00000584380 73 ntBASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 AL606490.9-201ENST00000603331 271 ntBASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 SNORD115-40-201ENST00000606510 82 ntBASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.87□□□□□ -1.79
CUEDC1Q9NWM3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 MIR491-201ENST00000384877 84 ntBASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 MIR590-201ENST00000385008 97 ntBASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 RNA5SP511-201ENST00000410487 115 ntBASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 AC097463.2-201ENST00000421074 142 ntBASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 AC018634.1-201ENST00000437554 401 ntBASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 AC245102.2-201ENST00000448956 180 ntBASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 RNU6-221P-201ENST00000459541 99 ntBASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 ATP5EP1-201ENST00000510257 156 ntBASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 RNU6-504P-201ENST00000516568 104 ntBASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 AL929325.1-201ENST00000603096 117 ntBASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 196.8 ms