Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 Y_RNA.515-201ENST00000384535 112 ntBASIC2.54□□□□□ -2
RLIMQ9NVW2 Y_RNA.539-201ENST00000384635 107 ntBASIC2.54□□□□□ -2
RLIMQ9NVW2 MIR491-201ENST00000384877 84 ntBASIC2.54□□□□□ -2
RLIMQ9NVW2 RNU6-847P-201ENST00000411115 108 ntBASIC2.54□□□□□ -2
RLIMQ9NVW2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.54□□□□□ -2
RLIMQ9NVW2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.54□□□□□ -2
RLIMQ9NVW2 AC123900.1-201ENST00000420390 96 ntBASIC2.54□□□□□ -2
RLIMQ9NVW2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.54□□□□□ -2
RLIMQ9NVW2 AC024067.1-201ENST00000426199 223 ntBASIC2.54□□□□□ -2
RLIMQ9NVW2 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.54□□□□□ -2
RLIMQ9NVW2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.54□□□□□ -2
RLIMQ9NVW2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.54□□□□□ -2
RLIMQ9NVW2 MIR4325-201ENST00000583049 90 ntBASIC2.54□□□□□ -2
RLIMQ9NVW2 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.54□□□□□ -2
RLIMQ9NVW2 BX284668.6-201ENST00000606899 438 ntBASIC2.54□□□□□ -2
RLIMQ9NVW2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.54□□□□□ -2
RLIMQ9NVW2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.54□□□□□ -2
RLIMQ9NVW2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
RLIMQ9NVW2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
RLIMQ9NVW2 AC009487.2-201ENST00000420969 6821 ntBASIC2.53□□□□□ -2
RLIMQ9NVW2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
RLIMQ9NVW2 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RLIMQ9NVW2 SNORD115-3-201ENST00000363100 82 ntBASIC2.53□□□□□ -2
RLIMQ9NVW2 SNORA38-201ENST00000363946 132 ntBASIC2.53□□□□□ -2
RLIMQ9NVW2 RNU6-740P-201ENST00000364734 105 ntBASIC2.53□□□□□ -2
RLIMQ9NVW2 RNU6-407P-201ENST00000365280 104 ntBASIC2.53□□□□□ -2
RLIMQ9NVW2 RNU6-1235P-201ENST00000384559 107 ntBASIC2.53□□□□□ -2
RLIMQ9NVW2 SNORA44-201ENST00000384584 132 ntBASIC2.53□□□□□ -2
RLIMQ9NVW2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.53□□□□□ -2
RLIMQ9NVW2 RNU6-498P-201ENST00000459468 107 ntBASIC2.53□□□□□ -2
RLIMQ9NVW2 RNU6-221P-201ENST00000459541 99 ntBASIC2.53□□□□□ -2
RLIMQ9NVW2 S100A11P2-201ENST00000467589 312 ntBASIC2.53□□□□□ -2
RLIMQ9NVW2 RNU6-191P-201ENST00000516295 94 ntBASIC2.53□□□□□ -2
RLIMQ9NVW2 Y_RNA.679-201ENST00000516416 91 ntBASIC2.53□□□□□ -2
RLIMQ9NVW2 SNORA70.24-201ENST00000517233 118 ntBASIC2.53□□□□□ -2
RLIMQ9NVW2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.53□□□□□ -2
RLIMQ9NVW2 U4atac.1-201ENST00000618345 95 ntBASIC2.53□□□□□ -2
RLIMQ9NVW2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
RLIMQ9NVW2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RLIMQ9NVW2 Y_RNA.124-201ENST00000363339 93 ntBASIC2.52□□□□□ -2.01
RLIMQ9NVW2 Y_RNA.243-201ENST00000364481 109 ntBASIC2.52□□□□□ -2.01
RLIMQ9NVW2 Y_RNA.269-201ENST00000364685 89 ntBASIC2.52□□□□□ -2.01
RLIMQ9NVW2 Y_RNA.332-201ENST00000365271 113 ntBASIC2.52□□□□□ -2.01
RLIMQ9NVW2 MIR483-201ENST00000385070 76 ntBASIC2.52□□□□□ -2.01
RLIMQ9NVW2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.52□□□□□ -2.01
RLIMQ9NVW2 Y_RNA.590-201ENST00000410140 107 ntBASIC2.52□□□□□ -2.01
RLIMQ9NVW2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.52□□□□□ -2.01
RLIMQ9NVW2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.52□□□□□ -2.01
RLIMQ9NVW2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.52□□□□□ -2.01
RLIMQ9NVW2 MIR4643-201ENST00000577473 78 ntBASIC2.52□□□□□ -2.01
RLIMQ9NVW2 AL162424.1-201ENST00000602325 221 ntBASIC2.52□□□□□ -2.01
RLIMQ9NVW2 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.52□□□□□ -2.01
RLIMQ9NVW2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RLIMQ9NVW2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RLIMQ9NVW2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RLIMQ9NVW2 RNU1-112P-201ENST00000364401 164 ntBASIC2.51□□□□□ -2.01
RLIMQ9NVW2 Y_RNA.275-201ENST00000364726 110 ntBASIC2.51□□□□□ -2.01
RLIMQ9NVW2 U8.9-201ENST00000365667 134 ntBASIC2.51□□□□□ -2.01
RLIMQ9NVW2 SNORA20B-201ENST00000384220 132 ntBASIC2.51□□□□□ -2.01
RLIMQ9NVW2 RNU6-1289P-201ENST00000384431 106 ntBASIC2.51□□□□□ -2.01
RLIMQ9NVW2 RNU6-1072P-201ENST00000384703 107 ntBASIC2.51□□□□□ -2.01
RLIMQ9NVW2 RNU6-443P-201ENST00000384780 107 ntBASIC2.51□□□□□ -2.01
RLIMQ9NVW2 RNU6-855P-201ENST00000410395 104 ntBASIC2.51□□□□□ -2.01
RLIMQ9NVW2 RNU6-651P-201ENST00000411040 105 ntBASIC2.51□□□□□ -2.01
RLIMQ9NVW2 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.51□□□□□ -2.01
RLIMQ9NVW2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.51□□□□□ -2.01
RLIMQ9NVW2 AC008134.1-201ENST00000420943 193 ntBASIC2.51□□□□□ -2.01
RLIMQ9NVW2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.51□□□□□ -2.01
RLIMQ9NVW2 SNORA27.4-201ENST00000516650 95 ntBASIC2.51□□□□□ -2.01
RLIMQ9NVW2 RNU6-794P-201ENST00000517261 64 ntBASIC2.51□□□□□ -2.01
RLIMQ9NVW2 MIR4658-201ENST00000584344 65 ntBASIC2.51□□□□□ -2.01
RLIMQ9NVW2 AC005828.6-201ENST00000606610 232 ntBASIC2.51□□□□□ -2.01
RLIMQ9NVW2 AC141273.2-201ENST00000618989 130 ntBASIC2.51□□□□□ -2.01
RLIMQ9NVW2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
RLIMQ9NVW2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.51□□□□□ -2.01
RLIMQ9NVW2 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
RLIMQ9NVW2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RLIMQ9NVW2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.5□□□□□ -2.01
RLIMQ9NVW2 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RLIMQ9NVW2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RLIMQ9NVW2 AL355796.1-201ENST00000406706 323 ntBASIC2.5□□□□□ -2.01
RLIMQ9NVW2 MIR1253-201ENST00000408273 105 ntBASIC2.5□□□□□ -2.01
RLIMQ9NVW2 RNU2-61P-201ENST00000411069 191 ntBASIC2.5□□□□□ -2.01
RLIMQ9NVW2 AL121890.1-201ENST00000435457 205 ntBASIC2.5□□□□□ -2.01
RLIMQ9NVW2 MTCO1P44-201ENST00000441935 243 ntBASIC2.5□□□□□ -2.01
RLIMQ9NVW2 AL135938.1-201ENST00000443141 297 ntBASIC2.5□□□□□ -2.01
RLIMQ9NVW2 AL357134.1-201ENST00000445848 426 ntBASIC2.5□□□□□ -2.01
RLIMQ9NVW2 SNORD65B-201ENST00000459126 73 ntBASIC2.5□□□□□ -2.01
RLIMQ9NVW2 AC010409.1-201ENST00000487382 476 ntBASIC2.5□□□□□ -2.01
RLIMQ9NVW2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.5□□□□□ -2.01
RLIMQ9NVW2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.5□□□□□ -2.01
RLIMQ9NVW2 RNU2-34P-201ENST00000516534 121 ntBASIC2.5□□□□□ -2.01
RLIMQ9NVW2 AC025647.1-201ENST00000517879 253 ntBASIC2.5□□□□□ -2.01
RLIMQ9NVW2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.5□□□□□ -2.01
RLIMQ9NVW2 AC079600.2-201ENST00000550076 130 ntBASIC2.5□□□□□ -2.01
RLIMQ9NVW2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.5□□□□□ -2.01
RLIMQ9NVW2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
RLIMQ9NVW2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.5□□□□□ -2.01
RLIMQ9NVW2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
RLIMQ9NVW2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms