Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 Y_RNA.691-201ENST00000516611 103 ntBASIC1.86□□□□□ -2.11
BLOC1S4Q9NUP1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.86□□□□□ -2.11
BLOC1S4Q9NUP1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.86□□□□□ -2.11
BLOC1S4Q9NUP1 MZT1P2-201ENST00000604387 248 ntBASIC1.86□□□□□ -2.11
BLOC1S4Q9NUP1 AC006435.5-201ENST00000624486 112 ntBASIC1.86□□□□□ -2.11
BLOC1S4Q9NUP1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
BLOC1S4Q9NUP1 SNORD33-201ENST00000362761 85 ntBASIC1.85□□□□□ -2.11
BLOC1S4Q9NUP1 RNU11-5P-201ENST00000391216 129 ntBASIC1.85□□□□□ -2.11
BLOC1S4Q9NUP1 RPL23AP50-201ENST00000434149 455 ntBASIC1.85□□□□□ -2.11
BLOC1S4Q9NUP1 MTND4P18-201ENST00000447010 465 ntBASIC1.85□□□□□ -2.11
BLOC1S4Q9NUP1 MTND3P10-201ENST00000450967 341 ntBASIC1.85□□□□□ -2.11
BLOC1S4Q9NUP1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.85□□□□□ -2.11
BLOC1S4Q9NUP1 Y_RNA.67-201ENST00000362870 100 ntBASIC1.84□□□□□ -2.11
BLOC1S4Q9NUP1 MIR504-201ENST00000385065 83 ntBASIC1.84□□□□□ -2.11
BLOC1S4Q9NUP1 AC073910.1-201ENST00000445047 438 ntBASIC1.84□□□□□ -2.11
BLOC1S4Q9NUP1 AC103851.1-201ENST00000506833 274 ntBASIC1.84□□□□□ -2.11
BLOC1S4Q9NUP1 RNU6-107P-201ENST00000516643 102 ntBASIC1.84□□□□□ -2.11
BLOC1S4Q9NUP1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.84□□□□□ -2.11
BLOC1S4Q9NUP1 MIR4709-201ENST00000577272 72 ntBASIC1.84□□□□□ -2.11
BLOC1S4Q9NUP1 MIR3683-201ENST00000580847 82 ntBASIC1.84□□□□□ -2.11
BLOC1S4Q9NUP1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.84□□□□□ -2.11
BLOC1S4Q9NUP1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 AC100821.1-201ENST00000523153 2479 ntBASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 RNU6-222P-201ENST00000362438 107 ntBASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 RNU1-78P-201ENST00000391248 165 ntBASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 SNORA75.4-201ENST00000391278 119 ntBASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 EIF1P2-201ENST00000428233 350 ntBASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 HSPE1P24-201ENST00000450782 238 ntBASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 RNU7-87P-201ENST00000459343 62 ntBASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 RPL7P42-201ENST00000481005 679 ntBASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 RPL17P19-201ENST00000489069 552 ntBASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 HMGN1P12-201ENST00000499125 195 ntBASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 PRDX4P1-201ENST00000507189 574 ntBASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 AC074133.1-201ENST00000515696 183 ntBASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 MIR2355-201ENST00000517199 87 ntBASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 AC091144.1-201ENST00000519573 138 ntBASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 AC012493.3-201ENST00000604494 112 ntBASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 AC022306.2-201ENST00000617563 647 ntBASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 AC092794.2-201ENST00000620933 563 ntBASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
BLOC1S4Q9NUP1 ICE2P2-201ENST00000483823 2787 ntBASIC1.82□□□□□ -2.12
BLOC1S4Q9NUP1 MIR126-201ENST00000362291 85 ntBASIC1.82□□□□□ -2.12
BLOC1S4Q9NUP1 RNU6-1264P-201ENST00000383891 107 ntBASIC1.82□□□□□ -2.12
BLOC1S4Q9NUP1 Y_RNA.473-201ENST00000384333 102 ntBASIC1.82□□□□□ -2.12
BLOC1S4Q9NUP1 RNA5SP213-201ENST00000391031 106 ntBASIC1.82□□□□□ -2.12
BLOC1S4Q9NUP1 RNA5SP467-201ENST00000391274 118 ntBASIC1.82□□□□□ -2.12
BLOC1S4Q9NUP1 AL353997.1-201ENST00000432936 108 ntBASIC1.82□□□□□ -2.12
BLOC1S4Q9NUP1 RNU7-94P-201ENST00000459576 63 ntBASIC1.82□□□□□ -2.12
BLOC1S4Q9NUP1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.82□□□□□ -2.12
BLOC1S4Q9NUP1 AK6P2-201ENST00000549020 471 ntBASIC1.82□□□□□ -2.12
BLOC1S4Q9NUP1 AC004584.2-201ENST00000570407 410 ntBASIC1.82□□□□□ -2.12
BLOC1S4Q9NUP1 SNORA77B-201ENST00000578179 125 ntBASIC1.82□□□□□ -2.12
BLOC1S4Q9NUP1 MIR4298-201ENST00000584380 73 ntBASIC1.82□□□□□ -2.12
BLOC1S4Q9NUP1 TPTEP1-208ENST00000636884 213 ntBASIC1.82□□□□□ -2.12
BLOC1S4Q9NUP1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
BLOC1S4Q9NUP1 RNU4-42P-201ENST00000364738 142 ntBASIC1.81□□□□□ -2.12
BLOC1S4Q9NUP1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.81□□□□□ -2.12
BLOC1S4Q9NUP1 UQCRBP2-201ENST00000447827 297 ntBASIC1.81□□□□□ -2.12
BLOC1S4Q9NUP1 AC245517.4-201ENST00000448601 281 ntBASIC1.81□□□□□ -2.12
BLOC1S4Q9NUP1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.81□□□□□ -2.12
BLOC1S4Q9NUP1 AC005908.1-201ENST00000468701 347 ntBASIC1.81□□□□□ -2.12
BLOC1S4Q9NUP1 RPS26P45-201ENST00000471748 340 ntBASIC1.81□□□□□ -2.12
BLOC1S4Q9NUP1 AL163195.1-201ENST00000496941 348 ntBASIC1.81□□□□□ -2.12
BLOC1S4Q9NUP1 AP003033.1-201ENST00000527244 415 ntBASIC1.81□□□□□ -2.12
BLOC1S4Q9NUP1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.81□□□□□ -2.12
BLOC1S4Q9NUP1 AC025253.1-201ENST00000613623 543 ntBASIC1.81□□□□□ -2.12
BLOC1S4Q9NUP1 AC104260.1-201ENST00000616660 539 ntBASIC1.81□□□□□ -2.12
BLOC1S4Q9NUP1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.81□□□□□ -2.12
BLOC1S4Q9NUP1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
BLOC1S4Q9NUP1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.8□□□□□ -2.12
BLOC1S4Q9NUP1 MIR764-201ENST00000390811 85 ntBASIC1.8□□□□□ -2.12
BLOC1S4Q9NUP1 RNU6-1001P-201ENST00000411265 100 ntBASIC1.8□□□□□ -2.12
BLOC1S4Q9NUP1 RN7SKP101-201ENST00000411376 320 ntBASIC1.8□□□□□ -2.12
BLOC1S4Q9NUP1 AC010598.1-201ENST00000510378 103 ntBASIC1.8□□□□□ -2.12
BLOC1S4Q9NUP1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.8□□□□□ -2.12
BLOC1S4Q9NUP1 RNU7-99P-201ENST00000516271 62 ntBASIC1.8□□□□□ -2.12
BLOC1S4Q9NUP1 MIR5690-201ENST00000583739 73 ntBASIC1.8□□□□□ -2.12
BLOC1S4Q9NUP1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.8□□□□□ -2.12
BLOC1S4Q9NUP1 U6.73-201ENST00000619194 103 ntBASIC1.8□□□□□ -2.12
BLOC1S4Q9NUP1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.8□□□□□ -2.12
BLOC1S4Q9NUP1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.8□□□□□ -2.12
BLOC1S4Q9NUP1 SNORA33-201ENST00000363664 130 ntBASIC1.79□□□□□ -2.12
BLOC1S4Q9NUP1 RNU6-879P-201ENST00000364328 108 ntBASIC1.79□□□□□ -2.12
BLOC1S4Q9NUP1 MIR329-1-201ENST00000385028 80 ntBASIC1.79□□□□□ -2.12
BLOC1S4Q9NUP1 MTCYBP4-201ENST00000401524 249 ntBASIC1.79□□□□□ -2.12
BLOC1S4Q9NUP1 AC092423.1-201ENST00000430165 186 ntBASIC1.79□□□□□ -2.12
BLOC1S4Q9NUP1 AC098614.3-201ENST00000438957 440 ntBASIC1.79□□□□□ -2.12
BLOC1S4Q9NUP1 RNU7-34P-201ENST00000459394 64 ntBASIC1.79□□□□□ -2.12
BLOC1S4Q9NUP1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.79□□□□□ -2.12
BLOC1S4Q9NUP1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.79□□□□□ -2.12
BLOC1S4Q9NUP1 SNORA25.15-201ENST00000516487 89 ntBASIC1.79□□□□□ -2.12
BLOC1S4Q9NUP1 SCARNA16.2-201ENST00000516520 172 ntBASIC1.79□□□□□ -2.12
BLOC1S4Q9NUP1 RNU6-264P-201ENST00000517134 104 ntBASIC1.79□□□□□ -2.12
BLOC1S4Q9NUP1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.79□□□□□ -2.12
BLOC1S4Q9NUP1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.79□□□□□ -2.12
BLOC1S4Q9NUP1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms