Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 Y_RNA.121-201ENST00000363309 113 ntBASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 SNORD21-201ENST00000383953 95 ntBASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 RNU1-57P-201ENST00000384491 166 ntBASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 SNORA26.5-201ENST00000391215 123 ntBASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 RNU2-52P-201ENST00000410680 190 ntBASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 SEPT7P4-201ENST00000437076 306 ntBASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 RPS20P10-201ENST00000451209 253 ntBASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 MRPS36P2-201ENST00000512569 299 ntBASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 AC136628.3-201ENST00000521868 290 ntBASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 AC100767.1-201ENST00000528178 123 ntBASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 AC002064.3-201ENST00000623448 346 ntBASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 AC069528.2-201ENST00000624849 1991 ntBASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PDLIM7Q9NR12 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PDLIM7Q9NR12 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PDLIM7Q9NR12 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PDLIM7Q9NR12 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PDLIM7Q9NR12 Y_RNA.357-201ENST00000365487 109 ntBASIC3.26□□□□□ -1.89
PDLIM7Q9NR12 SNORA70B-201ENST00000384210 135 ntBASIC3.26□□□□□ -1.89
PDLIM7Q9NR12 RNU6-1081P-201ENST00000384537 107 ntBASIC3.26□□□□□ -1.89
PDLIM7Q9NR12 SNORA12-201ENST00000391162 147 ntBASIC3.26□□□□□ -1.89
PDLIM7Q9NR12 AC146507.2-201ENST00000460608 476 ntBASIC3.26□□□□□ -1.89
PDLIM7Q9NR12 RPL36AP48-201ENST00000485521 314 ntBASIC3.26□□□□□ -1.89
PDLIM7Q9NR12 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.26□□□□□ -1.89
PDLIM7Q9NR12 AC068657.1-201ENST00000520807 306 ntBASIC3.26□□□□□ -1.89
PDLIM7Q9NR12 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.26□□□□□ -1.89
PDLIM7Q9NR12 AL078604.3-201ENST00000615580 211 ntBASIC3.26□□□□□ -1.89
PDLIM7Q9NR12 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PDLIM7Q9NR12 AC010329.5-201ENST00000623497 2174 ntBASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 AC068700.1-201ENST00000565862 3754 ntBASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 MIR148B-201ENST00000362252 99 ntBASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 RNU6-1048P-201ENST00000364054 107 ntBASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 Y_RNA.243-201ENST00000364481 109 ntBASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 Y_RNA.343-201ENST00000365354 112 ntBASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 Y_RNA.400-201ENST00000383963 111 ntBASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 MIR196B-201ENST00000384852 84 ntBASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 RNA5SP274-201ENST00000410484 108 ntBASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 TOMM22P2-201ENST00000430735 237 ntBASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 AC013791.1-201ENST00000616619 62 ntBASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 AC134026.1-201ENST00000623249 2239 ntBASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 AC026241.1-201ENST00000517873 2142 ntBASIC3.25□□□□□ -1.89
PDLIM7Q9NR12 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
PDLIM7Q9NR12 RNU4-84P-201ENST00000364200 139 ntBASIC3.24□□□□□ -1.89
PDLIM7Q9NR12 RNU4-10P-201ENST00000364383 140 ntBASIC3.24□□□□□ -1.89
PDLIM7Q9NR12 SNORA67.2-201ENST00000384300 149 ntBASIC3.24□□□□□ -1.89
PDLIM7Q9NR12 Y_RNA.488-201ENST00000384403 102 ntBASIC3.24□□□□□ -1.89
PDLIM7Q9NR12 Y_RNA.497-201ENST00000384447 98 ntBASIC3.24□□□□□ -1.89
PDLIM7Q9NR12 RNU6-131P-201ENST00000391144 107 ntBASIC3.24□□□□□ -1.89
PDLIM7Q9NR12 RNU6-381P-201ENST00000391259 108 ntBASIC3.24□□□□□ -1.89
PDLIM7Q9NR12 UBL5P3-201ENST00000475112 231 ntBASIC3.24□□□□□ -1.89
PDLIM7Q9NR12 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.24□□□□□ -1.89
PDLIM7Q9NR12 Y_RNA.797-201ENST00000515977 94 ntBASIC3.24□□□□□ -1.89
PDLIM7Q9NR12 RN7SKP43-201ENST00000516173 320 ntBASIC3.24□□□□□ -1.89
PDLIM7Q9NR12 AC021269.2-201ENST00000532318 330 ntBASIC3.24□□□□□ -1.89
PDLIM7Q9NR12 AC079598.5-201ENST00000547460 117 ntBASIC3.24□□□□□ -1.89
PDLIM7Q9NR12 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.24□□□□□ -1.89
PDLIM7Q9NR12 MIR7153-201ENST00000637758 57 ntBASIC3.24□□□□□ -1.89
PDLIM7Q9NR12 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PDLIM7Q9NR12 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.24□□□□□ -1.89
PDLIM7Q9NR12 FAM35CP-201ENST00000554755 2470 ntBASIC3.24□□□□□ -1.89
PDLIM7Q9NR12 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM7Q9NR12 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM7Q9NR12 Y_RNA.287-201ENST00000364853 94 ntBASIC3.23□□□□□ -1.89
PDLIM7Q9NR12 RNU6-1117P-201ENST00000384525 104 ntBASIC3.23□□□□□ -1.89
PDLIM7Q9NR12 RPL21P3-201ENST00000395517 478 ntBASIC3.23□□□□□ -1.89
PDLIM7Q9NR12 MIR887-201ENST00000401258 79 ntBASIC3.23□□□□□ -1.89
PDLIM7Q9NR12 RN7SL633P-201ENST00000488974 297 ntBASIC3.23□□□□□ -1.89
PDLIM7Q9NR12 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.23□□□□□ -1.89
PDLIM7Q9NR12 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.23□□□□□ -1.89
PDLIM7Q9NR12 AC107016.2-201ENST00000547968 190 ntBASIC3.23□□□□□ -1.89
PDLIM7Q9NR12 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.23□□□□□ -1.89
PDLIM7Q9NR12 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.23□□□□□ -1.89
PDLIM7Q9NR12 MIR7843-201ENST00000622274 79 ntBASIC3.23□□□□□ -1.89
PDLIM7Q9NR12 AC091895.1-201ENST00000624494 256 ntBASIC3.23□□□□□ -1.89
PDLIM7Q9NR12 U6.115-201ENST00000636045 103 ntBASIC3.23□□□□□ -1.89
PDLIM7Q9NR12 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
PDLIM7Q9NR12 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM7Q9NR12 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.23□□□□□ -1.89
PDLIM7Q9NR12 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.23□□□□□ -1.89
PDLIM7Q9NR12 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
PDLIM7Q9NR12 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PDLIM7Q9NR12 U3.8-201ENST00000363675 217 ntBASIC3.22□□□□□ -1.89
PDLIM7Q9NR12 RNU6-818P-201ENST00000364837 108 ntBASIC3.22□□□□□ -1.89
PDLIM7Q9NR12 Y_RNA.293-201ENST00000364908 93 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms