Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 EDDM3CP-201ENST00000415977 425 ntBASIC2.85□□□□□ -1.95
VTA1Q9NP79 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.85□□□□□ -1.95
VTA1Q9NP79 AC245102.2-201ENST00000448956 180 ntBASIC2.85□□□□□ -1.95
VTA1Q9NP79 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.85□□□□□ -1.95
VTA1Q9NP79 RNU6-498P-201ENST00000459468 107 ntBASIC2.85□□□□□ -1.95
VTA1Q9NP79 RNU7-57P-201ENST00000459540 60 ntBASIC2.85□□□□□ -1.95
VTA1Q9NP79 AC018868.1-201ENST00000491307 315 ntBASIC2.85□□□□□ -1.95
VTA1Q9NP79 ATP5EP1-201ENST00000510257 156 ntBASIC2.85□□□□□ -1.95
VTA1Q9NP79 RNU6-965P-201ENST00000516721 96 ntBASIC2.85□□□□□ -1.95
VTA1Q9NP79 AC037487.3-201ENST00000606668 112 ntBASIC2.85□□□□□ -1.95
VTA1Q9NP79 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.85□□□□□ -1.95
VTA1Q9NP79 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VTA1Q9NP79 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
VTA1Q9NP79 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.84□□□□□ -1.95
VTA1Q9NP79 SNORD114-7-201ENST00000362520 77 ntBASIC2.84□□□□□ -1.95
VTA1Q9NP79 Y_RNA.105-201ENST00000363182 111 ntBASIC2.84□□□□□ -1.95
VTA1Q9NP79 SNORA38-201ENST00000363946 132 ntBASIC2.84□□□□□ -1.95
VTA1Q9NP79 RNU6-806P-201ENST00000365147 105 ntBASIC2.84□□□□□ -1.95
VTA1Q9NP79 RNU6-290P-201ENST00000365212 101 ntBASIC2.84□□□□□ -1.95
VTA1Q9NP79 MIR592-201ENST00000384959 97 ntBASIC2.84□□□□□ -1.95
VTA1Q9NP79 MIR548B-201ENST00000385247 97 ntBASIC2.84□□□□□ -1.95
VTA1Q9NP79 SNORA53-201ENST00000391141 249 ntBASIC2.84□□□□□ -1.95
VTA1Q9NP79 RNU4-53P-201ENST00000410828 140 ntBASIC2.84□□□□□ -1.95
VTA1Q9NP79 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.84□□□□□ -1.95
VTA1Q9NP79 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.84□□□□□ -1.95
VTA1Q9NP79 AL357134.1-201ENST00000445848 426 ntBASIC2.84□□□□□ -1.95
VTA1Q9NP79 RNU6-667P-201ENST00000517186 102 ntBASIC2.84□□□□□ -1.95
VTA1Q9NP79 AC062037.2-201ENST00000610137 73 ntBASIC2.84□□□□□ -1.95
VTA1Q9NP79 AC127459.3-201ENST00000624328 466 ntBASIC2.84□□□□□ -1.95
VTA1Q9NP79 snoZ196.1-201ENST00000625269 89 ntBASIC2.84□□□□□ -1.95
VTA1Q9NP79 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VTA1Q9NP79 snoU2_19.2-201ENST00000363024 80 ntBASIC2.83□□□□□ -1.96
VTA1Q9NP79 RNU6-472P-201ENST00000384299 107 ntBASIC2.83□□□□□ -1.96
VTA1Q9NP79 AL359511.1-201ENST00000402970 211 ntBASIC2.83□□□□□ -1.96
VTA1Q9NP79 RN7SKP192-201ENST00000411291 327 ntBASIC2.83□□□□□ -1.96
VTA1Q9NP79 RPL21P38-201ENST00000418090 167 ntBASIC2.83□□□□□ -1.96
VTA1Q9NP79 AC008134.1-201ENST00000420943 193 ntBASIC2.83□□□□□ -1.96
VTA1Q9NP79 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.83□□□□□ -1.96
VTA1Q9NP79 RNU6-221P-201ENST00000459541 99 ntBASIC2.83□□□□□ -1.96
VTA1Q9NP79 YWHAEP4-201ENST00000505390 198 ntBASIC2.83□□□□□ -1.96
VTA1Q9NP79 AL109918.3-201ENST00000603072 338 ntBASIC2.83□□□□□ -1.96
VTA1Q9NP79 AC006001.4-201ENST00000622243 395 ntBASIC2.83□□□□□ -1.96
VTA1Q9NP79 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.83□□□□□ -1.96
VTA1Q9NP79 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.83□□□□□ -1.96
VTA1Q9NP79 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.82□□□□□ -1.96
VTA1Q9NP79 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.82□□□□□ -1.96
VTA1Q9NP79 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VTA1Q9NP79 Y_RNA.26-201ENST00000362539 101 ntBASIC2.82□□□□□ -1.96
VTA1Q9NP79 Y_RNA.99-201ENST00000363138 105 ntBASIC2.82□□□□□ -1.96
VTA1Q9NP79 U8.2-201ENST00000363156 134 ntBASIC2.82□□□□□ -1.96
VTA1Q9NP79 Y_RNA.331-201ENST00000365267 102 ntBASIC2.82□□□□□ -1.96
VTA1Q9NP79 RNU6-326P-201ENST00000365480 107 ntBASIC2.82□□□□□ -1.96
VTA1Q9NP79 RNU1-109P-201ENST00000383960 147 ntBASIC2.82□□□□□ -1.96
VTA1Q9NP79 Y_RNA.446-201ENST00000384178 104 ntBASIC2.82□□□□□ -1.96
VTA1Q9NP79 RNU6-1248P-201ENST00000391096 64 ntBASIC2.82□□□□□ -1.96
VTA1Q9NP79 AL590004.2-201ENST00000404787 371 ntBASIC2.82□□□□□ -1.96
VTA1Q9NP79 AC139712.2-201ENST00000424302 339 ntBASIC2.82□□□□□ -1.96
VTA1Q9NP79 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.82□□□□□ -1.96
VTA1Q9NP79 SNORA4.4-201ENST00000515921 135 ntBASIC2.82□□□□□ -1.96
VTA1Q9NP79 AC087441.2-201ENST00000529141 262 ntBASIC2.82□□□□□ -1.96
VTA1Q9NP79 AC026271.5-201ENST00000577873 130 ntBASIC2.82□□□□□ -1.96
VTA1Q9NP79 AC008749.1-201ENST00000597650 306 ntBASIC2.82□□□□□ -1.96
VTA1Q9NP79 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.82□□□□□ -1.96
VTA1Q9NP79 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
VTA1Q9NP79 AL159152.1-201ENST00000635019 2587 ntBASIC2.82□□□□□ -1.96
VTA1Q9NP79 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VTA1Q9NP79 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.81□□□□□ -1.96
VTA1Q9NP79 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
VTA1Q9NP79 AL135786.1-201ENST00000415892 214 ntBASIC2.81□□□□□ -1.96
VTA1Q9NP79 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.81□□□□□ -1.96
VTA1Q9NP79 AC024067.1-201ENST00000426199 223 ntBASIC2.81□□□□□ -1.96
VTA1Q9NP79 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.81□□□□□ -1.96
VTA1Q9NP79 SNORD127-201ENST00000458892 86 ntBASIC2.81□□□□□ -1.96
VTA1Q9NP79 RN7SL636P-201ENST00000497504 294 ntBASIC2.81□□□□□ -1.96
VTA1Q9NP79 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.81□□□□□ -1.96
VTA1Q9NP79 RNU2-12P-201ENST00000517216 168 ntBASIC2.81□□□□□ -1.96
VTA1Q9NP79 AC004486.1-201ENST00000546846 233 ntBASIC2.81□□□□□ -1.96
VTA1Q9NP79 AC091932.3-201ENST00000624223 323 ntBASIC2.81□□□□□ -1.96
VTA1Q9NP79 AC006435.5-201ENST00000624486 112 ntBASIC2.81□□□□□ -1.96
VTA1Q9NP79 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VTA1Q9NP79 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VTA1Q9NP79 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.81□□□□□ -1.96
VTA1Q9NP79 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.8□□□□□ -1.96
VTA1Q9NP79 RNU6-1266P-201ENST00000362794 105 ntBASIC2.8□□□□□ -1.96
VTA1Q9NP79 Y_RNA.243-201ENST00000364481 109 ntBASIC2.8□□□□□ -1.96
VTA1Q9NP79 Y_RNA.396-201ENST00000383949 103 ntBASIC2.8□□□□□ -1.96
VTA1Q9NP79 Y_RNA.478-201ENST00000384358 107 ntBASIC2.8□□□□□ -1.96
VTA1Q9NP79 Y_RNA.512-201ENST00000384518 102 ntBASIC2.8□□□□□ -1.96
VTA1Q9NP79 RNU2-20P-201ENST00000410425 191 ntBASIC2.8□□□□□ -1.96
VTA1Q9NP79 Y_RNA.602-201ENST00000410535 92 ntBASIC2.8□□□□□ -1.96
VTA1Q9NP79 HSPE1P25-201ENST00000455484 251 ntBASIC2.8□□□□□ -1.96
VTA1Q9NP79 AC098869.1-201ENST00000481627 292 ntBASIC2.8□□□□□ -1.96
VTA1Q9NP79 AC234781.5-201ENST00000508429 271 ntBASIC2.8□□□□□ -1.96
VTA1Q9NP79 CYCSP26-201ENST00000534107 320 ntBASIC2.8□□□□□ -1.96
VTA1Q9NP79 AC006006.1-201ENST00000603082 144 ntBASIC2.8□□□□□ -1.96
VTA1Q9NP79 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.8□□□□□ -1.96
VTA1Q9NP79 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
VTA1Q9NP79 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.8□□□□□ -1.96
VTA1Q9NP79 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VTA1Q9NP79 AC010615.1-201ENST00000594254 1764 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms