Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 SNORD115-2-201ENST00000362842 82 ntBASIC6.7□□□□□ -1.34
SCAF1Q9H7N4 SNORA7.2-201ENST00000364446 145 ntBASIC6.7□□□□□ -1.34
SCAF1Q9H7N4 SNORD115-20-201ENST00000365099 82 ntBASIC6.7□□□□□ -1.34
SCAF1Q9H7N4 SNORA27-201ENST00000384323 126 ntBASIC6.7□□□□□ -1.34
SCAF1Q9H7N4 MIR491-201ENST00000384877 84 ntBASIC6.7□□□□□ -1.34
SCAF1Q9H7N4 AL445685.2-201ENST00000422551 342 ntBASIC6.7□□□□□ -1.34
SCAF1Q9H7N4 AC107083.1-201ENST00000439643 279 ntBASIC6.7□□□□□ -1.34
SCAF1Q9H7N4 AL691482.1-201ENST00000453255 87 ntBASIC6.7□□□□□ -1.34
SCAF1Q9H7N4 AL049830.1-201ENST00000468034 425 ntBASIC6.7□□□□□ -1.34
SCAF1Q9H7N4 RPS26P28-201ENST00000470806 348 ntBASIC6.7□□□□□ -1.34
SCAF1Q9H7N4 RNU7-99P-201ENST00000516271 62 ntBASIC6.7□□□□□ -1.34
SCAF1Q9H7N4 RNU6-341P-201ENST00000516973 96 ntBASIC6.7□□□□□ -1.34
SCAF1Q9H7N4 SCARNA3-201ENST00000517097 143 ntBASIC6.7□□□□□ -1.34
SCAF1Q9H7N4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC6.7□□□□□ -1.34
SCAF1Q9H7N4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC6.7□□□□□ -1.34
SCAF1Q9H7N4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCAF1Q9H7N4 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SCAF1Q9H7N4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCAF1Q9H7N4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC6.69□□□□□ -1.34
SCAF1Q9H7N4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCAF1Q9H7N4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC6.69□□□□□ -1.34
SCAF1Q9H7N4 Y_RNA.567-201ENST00000384736 106 ntBASIC6.69□□□□□ -1.34
SCAF1Q9H7N4 MIR634-201ENST00000385208 97 ntBASIC6.69□□□□□ -1.34
SCAF1Q9H7N4 PTMAP3-201ENST00000447474 330 ntBASIC6.69□□□□□ -1.34
SCAF1Q9H7N4 RNU6-448P-201ENST00000517052 107 ntBASIC6.69□□□□□ -1.34
SCAF1Q9H7N4 MIR3200-201ENST00000580767 85 ntBASIC6.69□□□□□ -1.34
SCAF1Q9H7N4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC6.69□□□□□ -1.34
SCAF1Q9H7N4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCAF1Q9H7N4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SCAF1Q9H7N4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
SCAF1Q9H7N4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC6.68□□□□□ -1.34
SCAF1Q9H7N4 AC011998.1-201ENST00000433403 117 ntBASIC6.68□□□□□ -1.34
SCAF1Q9H7N4 RNU6-998P-201ENST00000515894 101 ntBASIC6.68□□□□□ -1.34
SCAF1Q9H7N4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SCAF1Q9H7N4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC6.67□□□□□ -1.34
SCAF1Q9H7N4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SCAF1Q9H7N4 RNU6ATAC-201ENST00000408749 126 ntBASIC6.67□□□□□ -1.34
SCAF1Q9H7N4 HMGN2P21-201ENST00000447764 270 ntBASIC6.67□□□□□ -1.34
SCAF1Q9H7N4 AL358944.1-201ENST00000528537 144 ntBASIC6.67□□□□□ -1.34
SCAF1Q9H7N4 AL513043.2-201ENST00000573941 143 ntBASIC6.67□□□□□ -1.34
SCAF1Q9H7N4 MIR492-201ENST00000638676 116 ntBASIC6.67□□□□□ -1.34
SCAF1Q9H7N4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC6.67□□□□□ -1.34
SCAF1Q9H7N4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCAF1Q9H7N4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
SCAF1Q9H7N4 AC096644.4-201ENST00000563417 2912 ntBASIC6.66□□□□□ -1.34
SCAF1Q9H7N4 RNU6-50P-201ENST00000362356 103 ntBASIC6.66□□□□□ -1.34
SCAF1Q9H7N4 SNORA71.2-201ENST00000364941 134 ntBASIC6.66□□□□□ -1.34
SCAF1Q9H7N4 RNA5SP104-201ENST00000410989 118 ntBASIC6.66□□□□□ -1.34
SCAF1Q9H7N4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC6.66□□□□□ -1.34
SCAF1Q9H7N4 MIR4286-201ENST00000580651 93 ntBASIC6.66□□□□□ -1.34
SCAF1Q9H7N4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SCAF1Q9H7N4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCAF1Q9H7N4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SCAF1Q9H7N4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
SCAF1Q9H7N4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SCAF1Q9H7N4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SCAF1Q9H7N4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SCAF1Q9H7N4 RNU6-624P-201ENST00000363411 107 ntBASIC6.65□□□□□ -1.35
SCAF1Q9H7N4 snoU2-30.1-201ENST00000365012 70 ntBASIC6.65□□□□□ -1.35
SCAF1Q9H7N4 AC093578.1-201ENST00000415219 368 ntBASIC6.65□□□□□ -1.35
SCAF1Q9H7N4 RPL23AP93-201ENST00000440847 484 ntBASIC6.65□□□□□ -1.35
SCAF1Q9H7N4 RNU7-128P-201ENST00000517247 62 ntBASIC6.65□□□□□ -1.35
SCAF1Q9H7N4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC6.65□□□□□ -1.35
SCAF1Q9H7N4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC6.65□□□□□ -1.35
SCAF1Q9H7N4 AL049781.1-201ENST00000623195 3585 ntBASIC6.65□□□□□ -1.35
SCAF1Q9H7N4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.64□□□□□ -1.35
SCAF1Q9H7N4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SCAF1Q9H7N4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC6.64□□□□□ -1.35
SCAF1Q9H7N4 MIRLET7A1-201ENST00000362295 80 ntBASIC6.64□□□□□ -1.35
SCAF1Q9H7N4 SNORA1B-201ENST00000362535 133 ntBASIC6.64□□□□□ -1.35
SCAF1Q9H7N4 Y_RNA.241-201ENST00000364470 117 ntBASIC6.64□□□□□ -1.35
SCAF1Q9H7N4 SNORA32-201ENST00000384072 121 ntBASIC6.64□□□□□ -1.35
SCAF1Q9H7N4 MIR7-3-201ENST00000384898 110 ntBASIC6.64□□□□□ -1.35
SCAF1Q9H7N4 RNU11-5P-201ENST00000391216 129 ntBASIC6.64□□□□□ -1.35
SCAF1Q9H7N4 HMGN2P8-201ENST00000391458 268 ntBASIC6.64□□□□□ -1.35
SCAF1Q9H7N4 Z74021.1-201ENST00000423610 407 ntBASIC6.64□□□□□ -1.35
SCAF1Q9H7N4 AL117339.2-201ENST00000430475 180 ntBASIC6.64□□□□□ -1.35
SCAF1Q9H7N4 RPS29P7-201ENST00000439662 171 ntBASIC6.64□□□□□ -1.35
SCAF1Q9H7N4 MIR3609-201ENST00000582661 80 ntBASIC6.64□□□□□ -1.35
SCAF1Q9H7N4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC6.64□□□□□ -1.35
SCAF1Q9H7N4 AL161912.2-201ENST00000565707 3007 ntBASIC6.64□□□□□ -1.35
SCAF1Q9H7N4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
SCAF1Q9H7N4 AL136164.3-201ENST00000624429 3978 ntBASIC6.63□□□□□ -1.35
SCAF1Q9H7N4 AC107068.1-201ENST00000563286 4218 ntBASIC6.63□□□□□ -1.35
SCAF1Q9H7N4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SCAF1Q9H7N4 RNU6-800P-201ENST00000384473 103 ntBASIC6.63□□□□□ -1.35
SCAF1Q9H7N4 RNU6-1274P-201ENST00000384557 107 ntBASIC6.63□□□□□ -1.35
SCAF1Q9H7N4 RNU1-82P-201ENST00000390851 165 ntBASIC6.63□□□□□ -1.35
SCAF1Q9H7N4 RNA5SP239-201ENST00000410218 129 ntBASIC6.63□□□□□ -1.35
SCAF1Q9H7N4 AL135938.1-201ENST00000443141 297 ntBASIC6.63□□□□□ -1.35
SCAF1Q9H7N4 HMGN2P18-201ENST00000450680 270 ntBASIC6.63□□□□□ -1.35
SCAF1Q9H7N4 RNU6-634P-201ENST00000459134 106 ntBASIC6.63□□□□□ -1.35
SCAF1Q9H7N4 RN7SL810P-201ENST00000493031 276 ntBASIC6.63□□□□□ -1.35
SCAF1Q9H7N4 SNORA70.24-201ENST00000517233 118 ntBASIC6.63□□□□□ -1.35
SCAF1Q9H7N4 AC007179.3-201ENST00000604976 235 ntBASIC6.63□□□□□ -1.35
SCAF1Q9H7N4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC6.63□□□□□ -1.35
SCAF1Q9H7N4 MIR6875-201ENST00000617506 72 ntBASIC6.63□□□□□ -1.35
SCAF1Q9H7N4 CR392039.5-201ENST00000623201 510 ntBASIC6.63□□□□□ -1.35
SCAF1Q9H7N4 MIR3653-201ENST00000625572 110 ntBASIC6.63□□□□□ -1.35
SCAF1Q9H7N4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms