Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.41□□□□□ -1.86
SOX17Q9H6I2 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SOX17Q9H6I2 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SOX17Q9H6I2 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SOX17Q9H6I2 RNA5SP42-201ENST00000364278 115 ntBASIC3.41□□□□□ -1.86
SOX17Q9H6I2 SNORA70.4-201ENST00000365509 134 ntBASIC3.41□□□□□ -1.86
SOX17Q9H6I2 AC023449.1-201ENST00000454464 154 ntBASIC3.41□□□□□ -1.86
SOX17Q9H6I2 RN7SL293P-201ENST00000481765 281 ntBASIC3.41□□□□□ -1.86
SOX17Q9H6I2 CYCTP-201ENST00000504253 315 ntBASIC3.41□□□□□ -1.86
SOX17Q9H6I2 SCARNA17.1-201ENST00000516211 143 ntBASIC3.41□□□□□ -1.86
SOX17Q9H6I2 SCARNA17.2-201ENST00000516334 143 ntBASIC3.41□□□□□ -1.86
SOX17Q9H6I2 RNU6-1061P-201ENST00000516530 99 ntBASIC3.41□□□□□ -1.86
SOX17Q9H6I2 RNU6-965P-201ENST00000516721 96 ntBASIC3.41□□□□□ -1.86
SOX17Q9H6I2 RNU6-586P-201ENST00000517265 104 ntBASIC3.41□□□□□ -1.86
SOX17Q9H6I2 AC025647.1-201ENST00000517879 253 ntBASIC3.41□□□□□ -1.86
SOX17Q9H6I2 AC133485.4-201ENST00000561835 220 ntBASIC3.41□□□□□ -1.86
SOX17Q9H6I2 RPL23AP91-201ENST00000569211 455 ntBASIC3.41□□□□□ -1.86
SOX17Q9H6I2 AC138907.4-201ENST00000570107 226 ntBASIC3.41□□□□□ -1.86
SOX17Q9H6I2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.41□□□□□ -1.86
SOX17Q9H6I2 AL929325.1-201ENST00000603096 117 ntBASIC3.41□□□□□ -1.86
SOX17Q9H6I2 SCARNA17.4-201ENST00000614296 143 ntBASIC3.41□□□□□ -1.86
SOX17Q9H6I2 UCA1.1-201ENST00000620952 75 ntBASIC3.41□□□□□ -1.86
SOX17Q9H6I2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SOX17Q9H6I2 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.4□□□□□ -1.86
SOX17Q9H6I2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
SOX17Q9H6I2 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SOX17Q9H6I2 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.4□□□□□ -1.86
SOX17Q9H6I2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SOX17Q9H6I2 RNA5SP387-201ENST00000364226 106 ntBASIC3.4□□□□□ -1.87
SOX17Q9H6I2 RNU6-978P-201ENST00000364371 103 ntBASIC3.4□□□□□ -1.87
SOX17Q9H6I2 DYNLT3P1-201ENST00000378574 347 ntBASIC3.4□□□□□ -1.87
SOX17Q9H6I2 RNU6-484P-201ENST00000384016 107 ntBASIC3.4□□□□□ -1.87
SOX17Q9H6I2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.4□□□□□ -1.87
SOX17Q9H6I2 AC008134.1-201ENST00000420943 193 ntBASIC3.4□□□□□ -1.87
SOX17Q9H6I2 CYCSP35-201ENST00000451978 304 ntBASIC3.4□□□□□ -1.87
SOX17Q9H6I2 SNORD105B-201ENST00000458770 79 ntBASIC3.4□□□□□ -1.87
SOX17Q9H6I2 snoU13.22-201ENST00000459428 104 ntBASIC3.4□□□□□ -1.87
SOX17Q9H6I2 AC010531.2-201ENST00000465012 153 ntBASIC3.4□□□□□ -1.87
SOX17Q9H6I2 Y_RNA.709-201ENST00000516952 92 ntBASIC3.4□□□□□ -1.87
SOX17Q9H6I2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.4□□□□□ -1.87
SOX17Q9H6I2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SOX17Q9H6I2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.4□□□□□ -1.87
SOX17Q9H6I2 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SOX17Q9H6I2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SOX17Q9H6I2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
SOX17Q9H6I2 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.39□□□□□ -1.87
SOX17Q9H6I2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.39□□□□□ -1.87
SOX17Q9H6I2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SOX17Q9H6I2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SOX17Q9H6I2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SOX17Q9H6I2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SOX17Q9H6I2 SNORD18B-201ENST00000365659 72 ntBASIC3.39□□□□□ -1.87
SOX17Q9H6I2 SNORA22-201ENST00000383907 134 ntBASIC3.39□□□□□ -1.87
SOX17Q9H6I2 SNORA72-201ENST00000384339 132 ntBASIC3.39□□□□□ -1.87
SOX17Q9H6I2 RNU2-55P-201ENST00000411146 174 ntBASIC3.39□□□□□ -1.87
SOX17Q9H6I2 MLLT10P1-201ENST00000418346 262 ntBASIC3.39□□□□□ -1.87
SOX17Q9H6I2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.39□□□□□ -1.87
SOX17Q9H6I2 AC010401.1-201ENST00000463867 348 ntBASIC3.39□□□□□ -1.87
SOX17Q9H6I2 RNU6-711P-201ENST00000517255 106 ntBASIC3.39□□□□□ -1.87
SOX17Q9H6I2 AL021707.8-201ENST00000609428 183 ntBASIC3.39□□□□□ -1.87
SOX17Q9H6I2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.39□□□□□ -1.87
SOX17Q9H6I2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SOX17Q9H6I2 U6.98-201ENST00000637157 84 ntBASIC3.39□□□□□ -1.87
SOX17Q9H6I2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SOX17Q9H6I2 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SOX17Q9H6I2 AC138915.1-201ENST00000565427 1685 ntBASIC3.39□□□□□ -1.87
SOX17Q9H6I2 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.39□□□□□ -1.87
SOX17Q9H6I2 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SOX17Q9H6I2 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.38□□□□□ -1.87
SOX17Q9H6I2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SOX17Q9H6I2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SOX17Q9H6I2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SOX17Q9H6I2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SOX17Q9H6I2 RNU6-1240P-201ENST00000365155 104 ntBASIC3.38□□□□□ -1.87
SOX17Q9H6I2 RNU6-1235P-201ENST00000384559 107 ntBASIC3.38□□□□□ -1.87
SOX17Q9H6I2 MIR183-201ENST00000384958 110 ntBASIC3.38□□□□□ -1.87
SOX17Q9H6I2 AC006989.1-201ENST00000427212 131 ntBASIC3.38□□□□□ -1.87
SOX17Q9H6I2 RNU6-498P-201ENST00000459468 107 ntBASIC3.38□□□□□ -1.87
SOX17Q9H6I2 AC108081.1-201ENST00000604358 221 ntBASIC3.38□□□□□ -1.87
SOX17Q9H6I2 AC093732.2-201ENST00000607950 274 ntBASIC3.38□□□□□ -1.87
SOX17Q9H6I2 XIST_intron.1-201ENST00000619444 68 ntBASIC3.38□□□□□ -1.87
SOX17Q9H6I2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.38□□□□□ -1.87
SOX17Q9H6I2 U4.6-201ENST00000621618 127 ntBASIC3.38□□□□□ -1.87
SOX17Q9H6I2 MIR3914-2-201ENST00000637339 95 ntBASIC3.38□□□□□ -1.87
SOX17Q9H6I2 U6.105-201ENST00000637379 88 ntBASIC3.38□□□□□ -1.87
SOX17Q9H6I2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
SOX17Q9H6I2 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.38□□□□□ -1.87
SOX17Q9H6I2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SOX17Q9H6I2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SOX17Q9H6I2 RNA5SP50-201ENST00000363731 107 ntBASIC3.37□□□□□ -1.87
SOX17Q9H6I2 Y_RNA.203-201ENST00000364106 102 ntBASIC3.37□□□□□ -1.87
SOX17Q9H6I2 Y_RNA.333-201ENST00000365274 102 ntBASIC3.37□□□□□ -1.87
SOX17Q9H6I2 MIR490-201ENST00000384865 128 ntBASIC3.37□□□□□ -1.87
SOX17Q9H6I2 SNORA40.5-201ENST00000391061 128 ntBASIC3.37□□□□□ -1.87
SOX17Q9H6I2 AC016925.1-201ENST00000458303 298 ntBASIC3.37□□□□□ -1.87
SOX17Q9H6I2 RN7SL442P-201ENST00000473804 320 ntBASIC3.37□□□□□ -1.87
SOX17Q9H6I2 AC093663.1-201ENST00000497190 394 ntBASIC3.37□□□□□ -1.87
SOX17Q9H6I2 MIR3186-201ENST00000577404 85 ntBASIC3.37□□□□□ -1.87
SOX17Q9H6I2 MIR2681-201ENST00000581814 105 ntBASIC3.37□□□□□ -1.87
SOX17Q9H6I2 uc_338.4-201ENST00000616635 176 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms