Protein–RNA interactions for Protein: Q9H2H0

CXXC4, CXXC-type zinc finger protein 4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4Q9H2H0 USP9YP16-201ENST00000430287 407 ntBASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 MTCO3P29-201ENST00000432119 779 ntBASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 AC099677.2-201ENST00000436385 175 ntBASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 UBE2V1P7-201ENST00000446395 340 ntBASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 AC016717.1-201ENST00000448918 286 ntBASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 MTND3P10-201ENST00000450967 341 ntBASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 USP9YP23-201ENST00000455085 407 ntBASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 RNU6-1041P-201ENST00000516254 102 ntBASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 RNA5SP384-201ENST00000516615 116 ntBASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 MIR5094-201ENST00000578766 85 ntBASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 AC103810.8-201ENST00000607347 118 ntBASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 AC010999.1-201ENST00000611856 324 ntBASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 MIR338-201ENST00000636369 67 ntBASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
CXXC4Q9H2H0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CXXC4Q9H2H0 RNU6-862P-201ENST00000362804 105 ntBASIC1.55□□□□□ -2.16
CXXC4Q9H2H0 snoU2-30.2-201ENST00000362805 70 ntBASIC1.55□□□□□ -2.16
CXXC4Q9H2H0 RNU1-96P-201ENST00000364163 162 ntBASIC1.55□□□□□ -2.16
CXXC4Q9H2H0 Y_RNA.364-201ENST00000365532 101 ntBASIC1.55□□□□□ -2.16
CXXC4Q9H2H0 MIR520A-201ENST00000384862 85 ntBASIC1.55□□□□□ -2.16
CXXC4Q9H2H0 SNORA75.4-201ENST00000391278 119 ntBASIC1.55□□□□□ -2.16
CXXC4Q9H2H0 MIR1185-2-201ENST00000408687 86 ntBASIC1.55□□□□□ -2.16
CXXC4Q9H2H0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.55□□□□□ -2.16
CXXC4Q9H2H0 AC091179.3-201ENST00000474761 144 ntBASIC1.55□□□□□ -2.16
CXXC4Q9H2H0 AC010409.1-201ENST00000487382 476 ntBASIC1.55□□□□□ -2.16
CXXC4Q9H2H0 RN7SL274P-201ENST00000492268 272 ntBASIC1.55□□□□□ -2.16
CXXC4Q9H2H0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.55□□□□□ -2.16
CXXC4Q9H2H0 RNU1-117P-201ENST00000517041 158 ntBASIC1.55□□□□□ -2.16
CXXC4Q9H2H0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.55□□□□□ -2.16
CXXC4Q9H2H0 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.55□□□□□ -2.16
CXXC4Q9H2H0 UBL5P4-201ENST00000562584 236 ntBASIC1.55□□□□□ -2.16
CXXC4Q9H2H0 MIR3198-2-201ENST00000577868 80 ntBASIC1.55□□□□□ -2.16
CXXC4Q9H2H0 AC010615.1-201ENST00000594254 1764 ntBASIC1.54□□□□□ -2.16
CXXC4Q9H2H0 Y_RNA.48-201ENST00000362710 103 ntBASIC1.54□□□□□ -2.16
CXXC4Q9H2H0 Y_RNA.106-201ENST00000363189 100 ntBASIC1.54□□□□□ -2.16
CXXC4Q9H2H0 Y_RNA.112-201ENST00000363250 102 ntBASIC1.54□□□□□ -2.16
CXXC4Q9H2H0 Y_RNA.327-201ENST00000365201 102 ntBASIC1.54□□□□□ -2.16
CXXC4Q9H2H0 RNU6-1283P-201ENST00000365314 105 ntBASIC1.54□□□□□ -2.16
CXXC4Q9H2H0 RNU6-281P-201ENST00000384212 103 ntBASIC1.54□□□□□ -2.16
CXXC4Q9H2H0 RNU6-296P-201ENST00000384608 107 ntBASIC1.54□□□□□ -2.16
CXXC4Q9H2H0 RNU6-57P-201ENST00000411348 103 ntBASIC1.54□□□□□ -2.16
CXXC4Q9H2H0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.54□□□□□ -2.16
CXXC4Q9H2H0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.54□□□□□ -2.16
CXXC4Q9H2H0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.54□□□□□ -2.16
CXXC4Q9H2H0 HMGN1P12-201ENST00000499125 195 ntBASIC1.54□□□□□ -2.16
CXXC4Q9H2H0 Y_RNA.683-201ENST00000516508 93 ntBASIC1.54□□□□□ -2.16
CXXC4Q9H2H0 AC025647.1-201ENST00000517879 253 ntBASIC1.54□□□□□ -2.16
CXXC4Q9H2H0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.54□□□□□ -2.16
CXXC4Q9H2H0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.54□□□□□ -2.16
CXXC4Q9H2H0 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.54□□□□□ -2.16
CXXC4Q9H2H0 SNORA63D-201ENST00000364359 132 ntBASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 RNU6-1240P-201ENST00000365155 104 ntBASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 AC004965.1-201ENST00000413033 213 ntBASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 MTND1P23-201ENST00000416931 372 ntBASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 EIF1P2-201ENST00000428233 350 ntBASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 FTH1P12-201ENST00000432137 551 ntBASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 AC245047.4-201ENST00000433189 144 ntBASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 MTND5P16-201ENST00000460269 1703 ntBASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 RPL17P19-201ENST00000489069 552 ntBASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 RNA5SP481-201ENST00000516814 122 ntBASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 SNORA31.17-201ENST00000516953 127 ntBASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 AC024995.1-201ENST00000523014 93 ntBASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 MIR4419B-201ENST00000577260 68 ntBASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 MIR5695-201ENST00000579717 85 ntBASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 MIR3618-201ENST00000580330 88 ntBASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 MIR5690-201ENST00000583739 73 ntBASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 RBM11P1-201ENST00000604951 799 ntBASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 MIR502-201ENST00000606349 86 ntBASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 AL355073.2-201ENST00000612106 557 ntBASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 AC092794.2-201ENST00000620933 563 ntBASIC1.53□□□□□ -2.16
CXXC4Q9H2H0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CXXC4Q9H2H0 AL391987.6-201ENST00000305671 199 ntBASIC1.52□□□□□ -2.17
CXXC4Q9H2H0 Y_RNA.404-201ENST00000383978 102 ntBASIC1.52□□□□□ -2.17
CXXC4Q9H2H0 Y_RNA.473-201ENST00000384333 102 ntBASIC1.52□□□□□ -2.17
CXXC4Q9H2H0 MIR548B-201ENST00000385247 97 ntBASIC1.52□□□□□ -2.17
CXXC4Q9H2H0 RNU6-360P-201ENST00000390944 104 ntBASIC1.52□□□□□ -2.17
CXXC4Q9H2H0 MIR1253-201ENST00000408273 105 ntBASIC1.52□□□□□ -2.17
CXXC4Q9H2H0 HMGN2P38-201ENST00000423806 265 ntBASIC1.52□□□□□ -2.17
CXXC4Q9H2H0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.52□□□□□ -2.17
CXXC4Q9H2H0 HMGN2P34-201ENST00000437647 269 ntBASIC1.52□□□□□ -2.17
CXXC4Q9H2H0 RPL7P42-201ENST00000481005 679 ntBASIC1.52□□□□□ -2.17
CXXC4Q9H2H0 RPS29P11-201ENST00000496507 171 ntBASIC1.52□□□□□ -2.17
CXXC4Q9H2H0 AC008834.1-201ENST00000511612 175 ntBASIC1.52□□□□□ -2.17
CXXC4Q9H2H0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.52□□□□□ -2.17
CXXC4Q9H2H0 MIR2355-201ENST00000517199 87 ntBASIC1.52□□□□□ -2.17
CXXC4Q9H2H0 AC093023.1-201ENST00000547375 507 ntBASIC1.52□□□□□ -2.17
CXXC4Q9H2H0 MIR8081-201ENST00000611533 95 ntBASIC1.52□□□□□ -2.17
CXXC4Q9H2H0 AC126177.8-201ENST00000618339 1015 ntBASIC1.52□□□□□ -2.17
CXXC4Q9H2H0 AL669831.3-213ENST00000636676 183 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms