Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 RNU1-133P-201ENST00000364867 167 ntBASIC0.58□□□□□ -2.32
ALX4Q9H161 Y_RNA.393-201ENST00000383936 102 ntBASIC0.58□□□□□ -2.32
ALX4Q9H161 RNY3P9-201ENST00000384727 106 ntBASIC0.58□□□□□ -2.32
ALX4Q9H161 MIR521-1-201ENST00000384902 87 ntBASIC0.58□□□□□ -2.32
ALX4Q9H161 RNU6-325P-201ENST00000411132 105 ntBASIC0.58□□□□□ -2.32
ALX4Q9H161 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.58□□□□□ -2.32
ALX4Q9H161 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.58□□□□□ -2.32
ALX4Q9H161 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.58□□□□□ -2.32
ALX4Q9H161 AC004941.2-201ENST00000427009 228 ntBASIC0.58□□□□□ -2.32
ALX4Q9H161 AC073464.1-201ENST00000429823 534 ntBASIC0.58□□□□□ -2.32
ALX4Q9H161 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.58□□□□□ -2.32
ALX4Q9H161 AL590705.4-201ENST00000532209 134 ntBASIC0.58□□□□□ -2.32
ALX4Q9H161 AC090049.2-201ENST00000550377 109 ntBASIC0.58□□□□□ -2.32
ALX4Q9H161 AL121579.1-201ENST00000555129 305 ntBASIC0.58□□□□□ -2.32
ALX4Q9H161 MIR5692C1-201ENST00000585309 91 ntBASIC0.58□□□□□ -2.32
ALX4Q9H161 AC011712.1-201ENST00000588959 234 ntBASIC0.58□□□□□ -2.32
ALX4Q9H161 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.58□□□□□ -2.32
ALX4Q9H161 RNU6-199P-201ENST00000362954 107 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 U3.8-201ENST00000363675 217 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 Y_RNA.169-201ENST00000363745 96 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 RNU6-214P-201ENST00000384130 107 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 RNU6-933P-201ENST00000384424 107 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 SNORA80D-201ENST00000384488 135 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 MIR608-201ENST00000384820 100 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 MIR508-201ENST00000384857 115 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 MIR487A-201ENST00000385009 80 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 SNORD41-201ENST00000386967 70 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 AF228730.1-201ENST00000397972 663 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 MIR1185-2-201ENST00000408687 86 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.57□□□□□ -2.32
ALX4Q9H161 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.57□□□□□ -2.32
ALX4Q9H161 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.57□□□□□ -2.32
ALX4Q9H161 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.57□□□□□ -2.32
ALX4Q9H161 NDUFB4P10-201ENST00000452541 359 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.57□□□□□ -2.32
ALX4Q9H161 RNU6-1132P-201ENST00000459214 107 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 AC117454.1-201ENST00000491120 168 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 MTCO1P29-201ENST00000496868 288 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.57□□□□□ -2.32
ALX4Q9H161 RNU6-197P-201ENST00000516680 100 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 RNA5SP454-201ENST00000517231 127 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 AC090142.3-201ENST00000519012 385 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 AC068790.6-201ENST00000602558 258 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 SNORA28-201ENST00000606769 126 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 AL121757.2-201ENST00000611223 313 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 MIR6835-201ENST00000621552 64 ntBASIC0.57□□□□□ -2.32
ALX4Q9H161 AP000568.1-201ENST00000282964 442 ntBASIC0.56□□□□□ -2.32
ALX4Q9H161 RNU6-1266P-201ENST00000362794 105 ntBASIC0.56□□□□□ -2.32
ALX4Q9H161 SNORD115-8-201ENST00000363856 82 ntBASIC0.56□□□□□ -2.32
ALX4Q9H161 SNORD115-38-201ENST00000365037 82 ntBASIC0.56□□□□□ -2.32
ALX4Q9H161 Y_RNA.363-201ENST00000365529 113 ntBASIC0.56□□□□□ -2.32
ALX4Q9H161 SNORD37.1-201ENST00000390968 65 ntBASIC0.56□□□□□ -2.32
ALX4Q9H161 AL451046.2-201ENST00000403074 277 ntBASIC0.56□□□□□ -2.32
ALX4Q9H161 AL663109.1-201ENST00000411498 844 ntBASIC0.56□□□□□ -2.32
ALX4Q9H161 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.56□□□□□ -2.32
ALX4Q9H161 MTCO2P19-201ENST00000427513 598 ntBASIC0.56□□□□□ -2.32
ALX4Q9H161 MRPS10P2-201ENST00000431226 381 ntBASIC0.56□□□□□ -2.32
ALX4Q9H161 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.56□□□□□ -2.32
ALX4Q9H161 SNORA19.2-201ENST00000516013 114 ntBASIC0.56□□□□□ -2.32
ALX4Q9H161 RNU6-947P-201ENST00000516264 106 ntBASIC0.56□□□□□ -2.32
ALX4Q9H161 RNU6-1038P-201ENST00000516516 104 ntBASIC0.56□□□□□ -2.32
ALX4Q9H161 RNU6-1198P-201ENST00000516904 67 ntBASIC0.56□□□□□ -2.32
ALX4Q9H161 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.56□□□□□ -2.32
ALX4Q9H161 MIR4778-201ENST00000577635 80 ntBASIC0.56□□□□□ -2.32
ALX4Q9H161 MIR4528-201ENST00000577763 90 ntBASIC0.56□□□□□ -2.32
ALX4Q9H161 MIR4714-201ENST00000580728 77 ntBASIC0.56□□□□□ -2.32
ALX4Q9H161 AC100830.2-201ENST00000581636 240 ntBASIC0.56□□□□□ -2.32
ALX4Q9H161 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.56□□□□□ -2.32
ALX4Q9H161 AL357312.1-201ENST00000603879 298 ntBASIC0.56□□□□□ -2.32
ALX4Q9H161 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
ALX4Q9H161 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
ALX4Q9H161 Y_RNA.378-201ENST00000365652 113 ntBASIC0.55□□□□□ -2.32
ALX4Q9H161 RNU6-38P-201ENST00000384085 107 ntBASIC0.55□□□□□ -2.32
ALX4Q9H161 RNU6-348P-201ENST00000384386 107 ntBASIC0.55□□□□□ -2.32
ALX4Q9H161 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.55□□□□□ -2.32
ALX4Q9H161 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.55□□□□□ -2.32
ALX4Q9H161 AL606489.2-201ENST00000433886 234 ntBASIC0.55□□□□□ -2.32
ALX4Q9H161 MTCO2P16-201ENST00000436962 677 ntBASIC0.55□□□□□ -2.32
ALX4Q9H161 RPL39P39-201ENST00000455840 151 ntBASIC0.55□□□□□ -2.32
ALX4Q9H161 RPS27P22-201ENST00000478056 241 ntBASIC0.55□□□□□ -2.32
ALX4Q9H161 AC007834.2-201ENST00000536310 343 ntBASIC0.55□□□□□ -2.32
ALX4Q9H161 AL118558.2-201ENST00000556294 238 ntBASIC0.55□□□□□ -2.32
ALX4Q9H161 AC133485.1-201ENST00000567176 124 ntBASIC0.55□□□□□ -2.32
ALX4Q9H161 AC138907.6-201ENST00000568401 126 ntBASIC0.55□□□□□ -2.32
ALX4Q9H161 RN7SL793P-201ENST00000583259 296 ntBASIC0.55□□□□□ -2.32
ALX4Q9H161 AC080078.2-201ENST00000603766 501 ntBASIC0.55□□□□□ -2.32
ALX4Q9H161 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.55□□□□□ -2.32
ALX4Q9H161 SNORA2.2-201ENST00000365473 135 ntBASIC0.54□□□□□ -2.32
ALX4Q9H161 MIR216A-201ENST00000385063 110 ntBASIC0.54□□□□□ -2.32
ALX4Q9H161 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
ALX4Q9H161 RN7SKP142-201ENST00000411236 328 ntBASIC0.54□□□□□ -2.32
ALX4Q9H161 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.54□□□□□ -2.32
ALX4Q9H161 RPS3AP1-201ENST00000413190 320 ntBASIC0.54□□□□□ -2.32
ALX4Q9H161 AL353193.1-201ENST00000421444 268 ntBASIC0.54□□□□□ -2.32
ALX4Q9H161 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.54□□□□□ -2.32
ALX4Q9H161 STAG3L5P-204ENST00000443759 179 ntBASIC0.54□□□□□ -2.32
ALX4Q9H161 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.54□□□□□ -2.32
ALX4Q9H161 Y_RNA.654-201ENST00000497848 106 ntBASIC0.54□□□□□ -2.32
ALX4Q9H161 AC091885.1-201ENST00000506658 268 ntBASIC0.54□□□□□ -2.32
ALX4Q9H161 AC091133.4-201ENST00000511142 308 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms