Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.84□□□□□ -1.8
COL25A1Q9BXS0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
COL25A1Q9BXS0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.84□□□□□ -1.8
COL25A1Q9BXS0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL25A1Q9BXS0 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
COL25A1Q9BXS0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
COL25A1Q9BXS0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
COL25A1Q9BXS0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL25A1Q9BXS0 RNU6-486P-201ENST00000363116 107 ntBASIC3.83□□□□□ -1.8
COL25A1Q9BXS0 Y_RNA.437-201ENST00000384113 113 ntBASIC3.83□□□□□ -1.8
COL25A1Q9BXS0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
COL25A1Q9BXS0 RNA5SP354-201ENST00000391247 136 ntBASIC3.83□□□□□ -1.8
COL25A1Q9BXS0 RPS26P2-201ENST00000440331 348 ntBASIC3.83□□□□□ -1.8
COL25A1Q9BXS0 AC097462.1-201ENST00000514125 324 ntBASIC3.83□□□□□ -1.8
COL25A1Q9BXS0 AC096725.1-201ENST00000514266 313 ntBASIC3.83□□□□□ -1.8
COL25A1Q9BXS0 RNA5SP249-201ENST00000516127 99 ntBASIC3.83□□□□□ -1.8
COL25A1Q9BXS0 RN7SKP209-201ENST00000516888 304 ntBASIC3.83□□□□□ -1.8
COL25A1Q9BXS0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL25A1Q9BXS0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL25A1Q9BXS0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.83□□□□□ -1.8
COL25A1Q9BXS0 AC068254.2-201ENST00000623938 3577 ntBASIC3.83□□□□□ -1.8
COL25A1Q9BXS0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL25A1Q9BXS0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 AL136964.1-201ENST00000622038 2990 ntBASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 RNU6-1010P-201ENST00000362757 107 ntBASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 MIR195-201ENST00000385194 87 ntBASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 AL133475.1-201ENST00000404414 305 ntBASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 Y_RNA.601-201ENST00000410500 113 ntBASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 RPL39P25-201ENST00000449384 154 ntBASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 snoU13.26-201ENST00000459452 105 ntBASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 RNU1-41P-201ENST00000516161 162 ntBASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 RNU1-48P-201ENST00000516400 162 ntBASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 HSPE1P18-201ENST00000517602 280 ntBASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 AC107934.2-201ENST00000518653 310 ntBASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 RPS15AP11-201ENST00000594193 385 ntBASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 RPL17P51-201ENST00000605218 238 ntBASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 U7.3-201ENST00000616123 62 ntBASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL25A1Q9BXS0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 SNORD61-201ENST00000384252 73 ntBASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 SNORD77.3-201ENST00000391113 65 ntBASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 RNA5SP146-201ENST00000410743 123 ntBASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 RNA5SP508-201ENST00000411327 119 ntBASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 AL161651.1-201ENST00000440882 223 ntBASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 RNA5SP446-201ENST00000515955 82 ntBASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 AC027419.1-201ENST00000522976 328 ntBASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 MIR6715B-201ENST00000637172 77 ntBASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 MAPK10-303ENST00000641324 3959 ntBASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL25A1Q9BXS0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL25A1Q9BXS0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
COL25A1Q9BXS0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL25A1Q9BXS0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
COL25A1Q9BXS0 AL356489.2-201ENST00000566968 3528 ntBASIC3.8□□□□□ -1.8
COL25A1Q9BXS0 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL25A1Q9BXS0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.8□□□□□ -1.8
COL25A1Q9BXS0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
COL25A1Q9BXS0 RNU6-888P-201ENST00000363010 101 ntBASIC3.8□□□□□ -1.8
COL25A1Q9BXS0 RNU7-57P-201ENST00000459540 60 ntBASIC3.8□□□□□ -1.8
COL25A1Q9BXS0 SNORA70.18-201ENST00000516696 98 ntBASIC3.8□□□□□ -1.8
COL25A1Q9BXS0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL25A1Q9BXS0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 RNU6-1099P-201ENST00000363533 107 ntBASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 RNU1-133P-201ENST00000364867 167 ntBASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 SNORD14D-201ENST00000384390 87 ntBASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 RNU6-644P-201ENST00000391155 98 ntBASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 SNORA12-201ENST00000391162 147 ntBASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 MIR1912-201ENST00000410389 80 ntBASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 AC096949.1-201ENST00000412047 152 ntBASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 RPS4XP11-201ENST00000446897 772 ntBASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 AC006445.1-201ENST00000491925 405 ntBASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 RNU6-162P-201ENST00000516228 103 ntBASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 RNU6-1270P-201ENST00000517128 108 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms