Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC080128.1-201ENST00000474389 1917 ntBASIC2.78□□□□□ -1.97
NDC1Q9BTX1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
NDC1Q9BTX1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.77□□□□□ -1.97
NDC1Q9BTX1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.77□□□□□ -1.97
NDC1Q9BTX1 AL157777.2-201ENST00000258070 137 ntBASIC2.77□□□□□ -1.97
NDC1Q9BTX1 U3.8-201ENST00000363675 217 ntBASIC2.77□□□□□ -1.97
NDC1Q9BTX1 DYNLT3P1-201ENST00000378574 347 ntBASIC2.77□□□□□ -1.97
NDC1Q9BTX1 Y_RNA.435-201ENST00000384095 112 ntBASIC2.77□□□□□ -1.97
NDC1Q9BTX1 MIR548B-201ENST00000385247 97 ntBASIC2.77□□□□□ -1.97
NDC1Q9BTX1 AL031003.1-201ENST00000404229 172 ntBASIC2.77□□□□□ -1.97
NDC1Q9BTX1 AL357139.1-201ENST00000407792 426 ntBASIC2.77□□□□□ -1.97
NDC1Q9BTX1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
NDC1Q9BTX1 U8.19-201ENST00000459095 133 ntBASIC2.77□□□□□ -1.97
NDC1Q9BTX1 AC080013.2-201ENST00000460866 323 ntBASIC2.77□□□□□ -1.97
NDC1Q9BTX1 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.77□□□□□ -1.97
NDC1Q9BTX1 RNA5SP367-201ENST00000516557 118 ntBASIC2.77□□□□□ -1.97
NDC1Q9BTX1 RNU6-1098P-201ENST00000516772 96 ntBASIC2.77□□□□□ -1.97
NDC1Q9BTX1 AC009127.3-201ENST00000570531 403 ntBASIC2.77□□□□□ -1.97
NDC1Q9BTX1 MIR5739-201ENST00000619803 80 ntBASIC2.77□□□□□ -1.97
NDC1Q9BTX1 AC008873.1-201ENST00000625051 138 ntBASIC2.77□□□□□ -1.97
NDC1Q9BTX1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.77□□□□□ -1.97
NDC1Q9BTX1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.77□□□□□ -1.97
NDC1Q9BTX1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.77□□□□□ -1.97
NDC1Q9BTX1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NDC1Q9BTX1 AL035425.3-201ENST00000564206 4996 ntBASIC2.77□□□□□ -1.97
NDC1Q9BTX1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.76□□□□□ -1.97
NDC1Q9BTX1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NDC1Q9BTX1 MAPK10-362ENST00000641864 4484 ntBASIC2.76□□□□□ -1.97
NDC1Q9BTX1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NDC1Q9BTX1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
NDC1Q9BTX1 Y_RNA.170-201ENST00000363746 110 ntBASIC2.76□□□□□ -1.97
NDC1Q9BTX1 RNU6-944P-201ENST00000364023 107 ntBASIC2.76□□□□□ -1.97
NDC1Q9BTX1 RNU6-801P-201ENST00000364087 105 ntBASIC2.76□□□□□ -1.97
NDC1Q9BTX1 RNU6-1305P-201ENST00000364353 104 ntBASIC2.76□□□□□ -1.97
NDC1Q9BTX1 Y_RNA.243-201ENST00000364481 109 ntBASIC2.76□□□□□ -1.97
NDC1Q9BTX1 RNU6-763P-201ENST00000390865 106 ntBASIC2.76□□□□□ -1.97
NDC1Q9BTX1 SNORA48.8-201ENST00000391324 134 ntBASIC2.76□□□□□ -1.97
NDC1Q9BTX1 AL135790.2-201ENST00000437701 267 ntBASIC2.76□□□□□ -1.97
NDC1Q9BTX1 AP004217.1-201ENST00000480579 346 ntBASIC2.76□□□□□ -1.97
NDC1Q9BTX1 AC023141.11-201ENST00000508864 202 ntBASIC2.76□□□□□ -1.97
NDC1Q9BTX1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.76□□□□□ -1.97
NDC1Q9BTX1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.76□□□□□ -1.97
NDC1Q9BTX1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.76□□□□□ -1.97
NDC1Q9BTX1 RPL12P50-201ENST00000603116 116 ntBASIC2.76□□□□□ -1.97
NDC1Q9BTX1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.76□□□□□ -1.97
NDC1Q9BTX1 U6.115-201ENST00000636045 103 ntBASIC2.76□□□□□ -1.97
NDC1Q9BTX1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.76□□□□□ -1.97
NDC1Q9BTX1 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.76□□□□□ -1.97
NDC1Q9BTX1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
NDC1Q9BTX1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NDC1Q9BTX1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.75□□□□□ -1.97
NDC1Q9BTX1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.75□□□□□ -1.97
NDC1Q9BTX1 AC090515.1-201ENST00000465295 476 ntBASIC2.75□□□□□ -1.97
NDC1Q9BTX1 AC091021.1-201ENST00000468051 388 ntBASIC2.75□□□□□ -1.97
NDC1Q9BTX1 CKS1BP2-201ENST00000497342 240 ntBASIC2.75□□□□□ -1.97
NDC1Q9BTX1 AC091826.1-201ENST00000514065 313 ntBASIC2.75□□□□□ -1.97
NDC1Q9BTX1 RNA5SP385-201ENST00000515947 110 ntBASIC2.75□□□□□ -1.97
NDC1Q9BTX1 MIR449C-201ENST00000516047 92 ntBASIC2.75□□□□□ -1.97
NDC1Q9BTX1 AC018630.3-201ENST00000542637 96 ntBASIC2.75□□□□□ -1.97
NDC1Q9BTX1 GTF3AP2-201ENST00000557014 266 ntBASIC2.75□□□□□ -1.97
NDC1Q9BTX1 MIR3910-1-201ENST00000580936 111 ntBASIC2.75□□□□□ -1.97
NDC1Q9BTX1 ELOCP29-201ENST00000588193 334 ntBASIC2.75□□□□□ -1.97
NDC1Q9BTX1 AC023043.3-201ENST00000593113 385 ntBASIC2.75□□□□□ -1.97
NDC1Q9BTX1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
NDC1Q9BTX1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NDC1Q9BTX1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
NDC1Q9BTX1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.74□□□□□ -1.97
NDC1Q9BTX1 RNU6-804P-201ENST00000384286 107 ntBASIC2.74□□□□□ -1.97
NDC1Q9BTX1 SNORA19-201ENST00000384737 128 ntBASIC2.74□□□□□ -1.97
NDC1Q9BTX1 MIR586-201ENST00000385035 97 ntBASIC2.74□□□□□ -1.97
NDC1Q9BTX1 FO393413.1-201ENST00000402892 195 ntBASIC2.74□□□□□ -1.97
NDC1Q9BTX1 AL451074.5-201ENST00000415894 435 ntBASIC2.74□□□□□ -1.97
NDC1Q9BTX1 TRIAP1P1-201ENST00000427062 225 ntBASIC2.74□□□□□ -1.97
NDC1Q9BTX1 RPL23AP58-201ENST00000440453 469 ntBASIC2.74□□□□□ -1.97
NDC1Q9BTX1 AL135938.1-201ENST00000443141 297 ntBASIC2.74□□□□□ -1.97
NDC1Q9BTX1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.74□□□□□ -1.97
NDC1Q9BTX1 CYP2C59P-201ENST00000457790 269 ntBASIC2.74□□□□□ -1.97
NDC1Q9BTX1 RNU7-14P-201ENST00000459331 62 ntBASIC2.74□□□□□ -1.97
NDC1Q9BTX1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.74□□□□□ -1.97
NDC1Q9BTX1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.74□□□□□ -1.97
NDC1Q9BTX1 RNA5SP356-201ENST00000515972 94 ntBASIC2.74□□□□□ -1.97
NDC1Q9BTX1 SUMO2P18-201ENST00000518873 252 ntBASIC2.74□□□□□ -1.97
NDC1Q9BTX1 AC136628.3-201ENST00000521868 290 ntBASIC2.74□□□□□ -1.97
NDC1Q9BTX1 AC104465.1-201ENST00000611365 139 ntBASIC2.74□□□□□ -1.97
NDC1Q9BTX1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.74□□□□□ -1.97
NDC1Q9BTX1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NDC1Q9BTX1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
NDC1Q9BTX1 Z82209.1-201ENST00000422141 2135 ntBASIC2.74□□□□□ -1.97
NDC1Q9BTX1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.73□□□□□ -1.97
NDC1Q9BTX1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NDC1Q9BTX1 Y_RNA.8-201ENST00000362353 102 ntBASIC2.73□□□□□ -1.97
NDC1Q9BTX1 RNU6-234P-201ENST00000365229 104 ntBASIC2.73□□□□□ -1.97
NDC1Q9BTX1 Y_RNA.571-201ENST00000384753 98 ntBASIC2.73□□□□□ -1.97
NDC1Q9BTX1 SNORA26.5-201ENST00000391215 123 ntBASIC2.73□□□□□ -1.97
NDC1Q9BTX1 MIR300-201ENST00000401138 83 ntBASIC2.73□□□□□ -1.97
NDC1Q9BTX1 AL031121.1-201ENST00000406553 254 ntBASIC2.73□□□□□ -1.97
NDC1Q9BTX1 RNU6-394P-201ENST00000410735 107 ntBASIC2.73□□□□□ -1.97
NDC1Q9BTX1 AC087499.2-201ENST00000432861 149 ntBASIC2.73□□□□□ -1.97
NDC1Q9BTX1 AL161788.1-201ENST00000441805 169 ntBASIC2.73□□□□□ -1.97
NDC1Q9BTX1 SRIP1-201ENST00000489235 288 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms