Protein–RNA interactions for Protein: Q9BRG2

SH2D3A, SH2 domain-containing protein 3A, humanhuman

Predictions only

Length 576 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3AQ9BRG2 MIR548M-201ENST00000408260 86 ntBASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 Y_RNA.793-201ENST00000411222 111 ntBASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 RPL23AP36-201ENST00000413895 458 ntBASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 RPS15AP28-201ENST00000435088 386 ntBASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 MRPS10P1-201ENST00000448483 130 ntBASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 AC005042.3-201ENST00000453230 174 ntBASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 AC112771.1-201ENST00000463581 102 ntBASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 RPL23AP70-201ENST00000483361 460 ntBASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 SEM1P1-201ENST00000506694 209 ntBASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 SNORD116-28-201ENST00000516123 91 ntBASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 AC022559.1-201ENST00000520905 205 ntBASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 MIR3923-201ENST00000579521 83 ntBASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 PCGEM1.1-201ENST00000613431 131 ntBASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 AC010297.1-201ENST00000623948 149 ntBASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 ZNF204P-201ENST00000416749 2397 ntBASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SH2D3AQ9BRG2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 RNU4-15P-201ENST00000362613 141 ntBASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 Y_RNA.101-201ENST00000363154 102 ntBASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 Y_RNA.270-201ENST00000364693 104 ntBASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 Y_RNA.383-201ENST00000383855 97 ntBASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 RNU6-746P-201ENST00000384112 109 ntBASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 RNU6-662P-201ENST00000384253 104 ntBASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 RNU6-378P-201ENST00000384324 107 ntBASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 MIR186-201ENST00000384988 86 ntBASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 SNORA46.1-201ENST00000391069 153 ntBASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 RAB28P5-201ENST00000427490 651 ntBASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 AC107393.1-201ENST00000512403 346 ntBASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 RNA5SP24-201ENST00000516478 95 ntBASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 AP002001.1-203ENST00000534002 267 ntBASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 RPL21P9-201ENST00000556149 474 ntBASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 MIR3145-201ENST00000580727 82 ntBASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 AC037487.3-201ENST00000606668 112 ntBASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 uc_338.14-201ENST00000613162 166 ntBASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 AC110079.1-202ENST00000635213 138 ntBASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SH2D3AQ9BRG2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 MIR6073-201ENST00000352083 89 ntBASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 SNORA25.1-201ENST00000362326 128 ntBASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 RNU6-545P-201ENST00000362681 104 ntBASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 Y_RNA.331-201ENST00000365267 102 ntBASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 Y_RNA.435-201ENST00000384095 112 ntBASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 RNU1-57P-201ENST00000384491 166 ntBASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 MIR208B-201ENST00000401172 77 ntBASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 RNU2-61P-201ENST00000411069 191 ntBASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 AL513477.1-202ENST00000417061 214 ntBASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 AC018634.1-201ENST00000437554 401 ntBASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 IFNA11P-201ENST00000446352 526 ntBASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 Y_RNA.638-201ENST00000459374 113 ntBASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 RNU6-625P-201ENST00000459412 107 ntBASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 AL121594.1-201ENST00000475906 575 ntBASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 AC079598.5-201ENST00000547460 117 ntBASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 MIR3945-201ENST00000581853 98 ntBASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 AC067747.1-201ENST00000608026 250 ntBASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.59□□□□□ -1.99
SH2D3AQ9BRG2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.59□□□□□ -2
SH2D3AQ9BRG2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
SH2D3AQ9BRG2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SH2D3AQ9BRG2 RNU6-1210P-201ENST00000363775 107 ntBASIC2.58□□□□□ -2
SH2D3AQ9BRG2 RNU4-56P-201ENST00000364700 142 ntBASIC2.58□□□□□ -2
SH2D3AQ9BRG2 RNU6-1180P-201ENST00000364935 107 ntBASIC2.58□□□□□ -2
SH2D3AQ9BRG2 RNA5SP354-201ENST00000391247 136 ntBASIC2.58□□□□□ -2
SH2D3AQ9BRG2 RNU2-54P-201ENST00000410299 190 ntBASIC2.58□□□□□ -2
SH2D3AQ9BRG2 AC004866.1-201ENST00000411748 78 ntBASIC2.58□□□□□ -2
SH2D3AQ9BRG2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.58□□□□□ -2
SH2D3AQ9BRG2 UQCRBP2-201ENST00000447827 297 ntBASIC2.58□□□□□ -2
SH2D3AQ9BRG2 RPL36AP48-201ENST00000485521 314 ntBASIC2.58□□□□□ -2
SH2D3AQ9BRG2 AC074198.2-201ENST00000508153 258 ntBASIC2.58□□□□□ -2
SH2D3AQ9BRG2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.58□□□□□ -2
SH2D3AQ9BRG2 RNU1-41P-201ENST00000516161 162 ntBASIC2.58□□□□□ -2
SH2D3AQ9BRG2 RNU1-48P-201ENST00000516400 162 ntBASIC2.58□□□□□ -2
SH2D3AQ9BRG2 RNU6-344P-201ENST00000516635 111 ntBASIC2.58□□□□□ -2
SH2D3AQ9BRG2 RPPH1-2P-201ENST00000516688 293 ntBASIC2.58□□□□□ -2
SH2D3AQ9BRG2 RNU6-255P-201ENST00000516957 105 ntBASIC2.58□□□□□ -2
SH2D3AQ9BRG2 AP002392.1-201ENST00000537692 208 ntBASIC2.58□□□□□ -2
SH2D3AQ9BRG2 EIF4A1P12-201ENST00000551910 141 ntBASIC2.58□□□□□ -2
SH2D3AQ9BRG2 AL137100.2-201ENST00000555786 315 ntBASIC2.58□□□□□ -2
SH2D3AQ9BRG2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.58□□□□□ -2
SH2D3AQ9BRG2 SNRPGP20-201ENST00000604477 205 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms