Protein–RNA interactions for Protein: Q9BR84

ZNF559, Zinc finger protein 559, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559Q9BR84 MIR10B-201ENST00000385011 110 ntBASIC1.59□□□□□ -2.15
ZNF559Q9BR84 MT-TL1-201ENST00000386347 75 ntBASIC1.59□□□□□ -2.15
ZNF559Q9BR84 RNU4-62P-201ENST00000410125 130 ntBASIC1.59□□□□□ -2.15
ZNF559Q9BR84 AL445305.1-201ENST00000432577 575 ntBASIC1.59□□□□□ -2.15
ZNF559Q9BR84 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.59□□□□□ -2.15
ZNF559Q9BR84 RPL26P26-201ENST00000480251 434 ntBASIC1.59□□□□□ -2.15
ZNF559Q9BR84 HMGN1P13-201ENST00000505795 138 ntBASIC1.59□□□□□ -2.15
ZNF559Q9BR84 RNU6-1114P-201ENST00000516022 107 ntBASIC1.59□□□□□ -2.15
ZNF559Q9BR84 Y_RNA.670-201ENST00000516255 105 ntBASIC1.59□□□□□ -2.15
ZNF559Q9BR84 RNU6-250P-201ENST00000516958 103 ntBASIC1.59□□□□□ -2.15
ZNF559Q9BR84 AC025647.1-201ENST00000517879 253 ntBASIC1.59□□□□□ -2.15
ZNF559Q9BR84 AC024995.1-201ENST00000523014 93 ntBASIC1.59□□□□□ -2.15
ZNF559Q9BR84 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.59□□□□□ -2.15
ZNF559Q9BR84 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.59□□□□□ -2.15
ZNF559Q9BR84 AL121579.1-201ENST00000555129 305 ntBASIC1.59□□□□□ -2.15
ZNF559Q9BR84 AL355802.3-201ENST00000607571 545 ntBASIC1.59□□□□□ -2.15
ZNF559Q9BR84 MIR8070-201ENST00000616510 88 ntBASIC1.59□□□□□ -2.15
ZNF559Q9BR84 PISRT1.1-201ENST00000616930 107 ntBASIC1.59□□□□□ -2.15
ZNF559Q9BR84 AC006001.4-201ENST00000622243 395 ntBASIC1.59□□□□□ -2.15
ZNF559Q9BR84 AC099654.5-201ENST00000636479 350 ntBASIC1.59□□□□□ -2.15
ZNF559Q9BR84 MIR424-201ENST00000362227 98 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 Y_RNA.88-201ENST00000363029 99 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 RNU6-414P-201ENST00000363705 104 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 Y_RNA.179-201ENST00000363844 90 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 RNU6-1240P-201ENST00000365155 104 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 RNU6-439P-201ENST00000384188 106 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 RNU6-700P-201ENST00000391043 107 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 MIR1253-201ENST00000408273 105 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 MIR1185-2-201ENST00000408687 86 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 AP1B1P2-201ENST00000416196 106 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.58□□□□□ -2.16
ZNF559Q9BR84 USP9YP16-201ENST00000430287 407 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 MTND3P23-201ENST00000431980 347 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 HSPE1P9-201ENST00000440046 311 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 USP9YP23-201ENST00000455085 407 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 AC091179.3-201ENST00000474761 144 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 RPL36AP21-201ENST00000490372 323 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 RNU6-307P-201ENST00000516743 106 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 RNA5SP437-201ENST00000517249 129 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 AC005899.2-201ENST00000584353 90 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 AC009229.3-201ENST00000608056 282 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 AC010999.1-201ENST00000611856 324 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.58□□□□□ -2.16
ZNF559Q9BR84 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
ZNF559Q9BR84 Y_RNA.184-201ENST00000363884 108 ntBASIC1.57□□□□□ -2.16
ZNF559Q9BR84 RNU6-338P-201ENST00000383888 105 ntBASIC1.57□□□□□ -2.16
ZNF559Q9BR84 Y_RNA.473-201ENST00000384333 102 ntBASIC1.57□□□□□ -2.16
ZNF559Q9BR84 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
ZNF559Q9BR84 MIR548B-201ENST00000385247 97 ntBASIC1.57□□□□□ -2.16
ZNF559Q9BR84 RNU2-7P-201ENST00000410794 178 ntBASIC1.57□□□□□ -2.16
ZNF559Q9BR84 AC016909.1-201ENST00000415916 166 ntBASIC1.57□□□□□ -2.16
ZNF559Q9BR84 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.57□□□□□ -2.16
ZNF559Q9BR84 AC116353.2-201ENST00000505332 712 ntBASIC1.57□□□□□ -2.16
ZNF559Q9BR84 MIR5695-201ENST00000579717 85 ntBASIC1.57□□□□□ -2.16
ZNF559Q9BR84 AC005014.2-201ENST00000607795 599 ntBASIC1.57□□□□□ -2.16
ZNF559Q9BR84 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.57□□□□□ -2.16
ZNF559Q9BR84 AL512598.1-201ENST00000610158 273 ntBASIC1.57□□□□□ -2.16
ZNF559Q9BR84 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.57□□□□□ -2.16
ZNF559Q9BR84 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
ZNF559Q9BR84 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.56□□□□□ -2.16
ZNF559Q9BR84 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.56□□□□□ -2.16
ZNF559Q9BR84 RNU6-727P-201ENST00000363592 107 ntBASIC1.56□□□□□ -2.16
ZNF559Q9BR84 SNORD87-201ENST00000364849 89 ntBASIC1.56□□□□□ -2.16
ZNF559Q9BR84 Y_RNA.287-201ENST00000364853 94 ntBASIC1.56□□□□□ -2.16
ZNF559Q9BR84 RNA5SP363-201ENST00000365072 115 ntBASIC1.56□□□□□ -2.16
ZNF559Q9BR84 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
ZNF559Q9BR84 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.56□□□□□ -2.16
ZNF559Q9BR84 MTCYBP10-201ENST00000424905 650 ntBASIC1.56□□□□□ -2.16
ZNF559Q9BR84 JTBP1-201ENST00000441314 247 ntBASIC1.56□□□□□ -2.16
ZNF559Q9BR84 MTND3P10-201ENST00000450967 341 ntBASIC1.56□□□□□ -2.16
ZNF559Q9BR84 AC103851.1-201ENST00000506833 274 ntBASIC1.56□□□□□ -2.16
ZNF559Q9BR84 AC105029.1-201ENST00000520250 669 ntBASIC1.56□□□□□ -2.16
ZNF559Q9BR84 AK6P2-201ENST00000549020 471 ntBASIC1.56□□□□□ -2.16
ZNF559Q9BR84 DNAJC19P9-201ENST00000555084 351 ntBASIC1.56□□□□□ -2.16
ZNF559Q9BR84 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.56□□□□□ -2.16
ZNF559Q9BR84 RNY1P16-201ENST00000363063 111 ntBASIC1.55□□□□□ -2.16
ZNF559Q9BR84 Y_RNA.106-201ENST00000363189 100 ntBASIC1.55□□□□□ -2.16
ZNF559Q9BR84 Y_RNA.122-201ENST00000363331 96 ntBASIC1.55□□□□□ -2.16
ZNF559Q9BR84 Y_RNA.355-201ENST00000365462 98 ntBASIC1.55□□□□□ -2.16
ZNF559Q9BR84 Y_RNA.415-201ENST00000384012 112 ntBASIC1.55□□□□□ -2.16
ZNF559Q9BR84 MIR190B-201ENST00000401119 79 ntBASIC1.55□□□□□ -2.16
ZNF559Q9BR84 MIR1267-201ENST00000408723 78 ntBASIC1.55□□□□□ -2.16
ZNF559Q9BR84 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.55□□□□□ -2.16
ZNF559Q9BR84 Y_RNA.635-201ENST00000459041 101 ntBASIC1.55□□□□□ -2.16
ZNF559Q9BR84 RPL7P42-201ENST00000481005 679 ntBASIC1.55□□□□□ -2.16
ZNF559Q9BR84 PRDX4P1-201ENST00000507189 574 ntBASIC1.55□□□□□ -2.16
ZNF559Q9BR84 Y_RNA.683-201ENST00000516508 93 ntBASIC1.55□□□□□ -2.16
ZNF559Q9BR84 Y_RNA.691-201ENST00000516611 103 ntBASIC1.55□□□□□ -2.16
ZNF559Q9BR84 CYCSP23-201ENST00000519781 313 ntBASIC1.55□□□□□ -2.16
ZNF559Q9BR84 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.55□□□□□ -2.16
ZNF559Q9BR84 AC090617.3-201ENST00000573670 475 ntBASIC1.55□□□□□ -2.16
ZNF559Q9BR84 MIR4285-201ENST00000581001 85 ntBASIC1.55□□□□□ -2.16
ZNF559Q9BR84 AC016925.2-201ENST00000605108 242 ntBASIC1.55□□□□□ -2.16
ZNF559Q9BR84 AC022306.2-201ENST00000617563 647 ntBASIC1.55□□□□□ -2.16
ZNF559Q9BR84 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.55□□□□□ -2.16
ZNF559Q9BR84 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
ZNF559Q9BR84 RNU6-222P-201ENST00000362438 107 ntBASIC1.54□□□□□ -2.16
ZNF559Q9BR84 RNU6-281P-201ENST00000384212 103 ntBASIC1.54□□□□□ -2.16
ZNF559Q9BR84 RNU6-417P-201ENST00000384712 107 ntBASIC1.54□□□□□ -2.16
ZNF559Q9BR84 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms