Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RNU2-1-201ENST00000618664 191 ntBASIC2□□□□□ -2.09
NR1H4Q96RI1 U2.6-201ENST00000619225 191 ntBASIC2□□□□□ -2.09
NR1H4Q96RI1 U2.5-201ENST00000619465 191 ntBASIC2□□□□□ -2.09
NR1H4Q96RI1 U2.10-201ENST00000620268 191 ntBASIC2□□□□□ -2.09
NR1H4Q96RI1 AL160413.1-201ENST00000622780 310 ntBASIC2□□□□□ -2.09
NR1H4Q96RI1 Y_RNA.419-201ENST00000384041 102 ntBASIC1.99□□□□□ -2.09
NR1H4Q96RI1 RNU6-1310P-201ENST00000384153 107 ntBASIC1.99□□□□□ -2.09
NR1H4Q96RI1 SNORA67.4-201ENST00000384688 142 ntBASIC1.99□□□□□ -2.09
NR1H4Q96RI1 MIR518C-201ENST00000384822 101 ntBASIC1.99□□□□□ -2.09
NR1H4Q96RI1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.99□□□□□ -2.09
NR1H4Q96RI1 AC069257.2-201ENST00000441819 155 ntBASIC1.99□□□□□ -2.09
NR1H4Q96RI1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.99□□□□□ -2.09
NR1H4Q96RI1 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.99□□□□□ -2.09
NR1H4Q96RI1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.99□□□□□ -2.09
NR1H4Q96RI1 AL627230.6-201ENST00000611129 280 ntBASIC1.99□□□□□ -2.09
NR1H4Q96RI1 AC022513.1-201ENST00000624512 117 ntBASIC1.99□□□□□ -2.09
NR1H4Q96RI1 SCARNA15.3-201ENST00000626315 122 ntBASIC1.99□□□□□ -2.09
NR1H4Q96RI1 SCARNA4.1-201ENST00000628597 123 ntBASIC1.99□□□□□ -2.09
NR1H4Q96RI1 MIR4272-201ENST00000635924 64 ntBASIC1.99□□□□□ -2.09
NR1H4Q96RI1 MIR338-201ENST00000636369 67 ntBASIC1.99□□□□□ -2.09
NR1H4Q96RI1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.99□□□□□ -2.09
NR1H4Q96RI1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
NR1H4Q96RI1 RNU6-1019P-201ENST00000364424 107 ntBASIC1.98□□□□□ -2.09
NR1H4Q96RI1 RNU6-926P-201ENST00000384075 107 ntBASIC1.98□□□□□ -2.09
NR1H4Q96RI1 RNU6-417P-201ENST00000384712 107 ntBASIC1.98□□□□□ -2.09
NR1H4Q96RI1 RNA5SP323-201ENST00000391094 133 ntBASIC1.98□□□□□ -2.09
NR1H4Q96RI1 ELOCP21-201ENST00000412558 336 ntBASIC1.98□□□□□ -2.09
NR1H4Q96RI1 EBAG9P1-201ENST00000418955 543 ntBASIC1.98□□□□□ -2.09
NR1H4Q96RI1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.98□□□□□ -2.09
NR1H4Q96RI1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
NR1H4Q96RI1 AC022432.1-201ENST00000595739 310 ntBASIC1.98□□□□□ -2.09
NR1H4Q96RI1 AL109918.3-201ENST00000603072 338 ntBASIC1.98□□□□□ -2.09
NR1H4Q96RI1 AC046143.2-201ENST00000609789 160 ntBASIC1.98□□□□□ -2.09
NR1H4Q96RI1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.98□□□□□ -2.09
NR1H4Q96RI1 AC138305.3-201ENST00000624988 240 ntBASIC1.98□□□□□ -2.09
NR1H4Q96RI1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
NR1H4Q96RI1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
NR1H4Q96RI1 Y_RNA.5-201ENST00000362334 102 ntBASIC1.97□□□□□ -2.09
NR1H4Q96RI1 Y_RNA.27-201ENST00000362540 103 ntBASIC1.97□□□□□ -2.09
NR1H4Q96RI1 Y_RNA.535-201ENST00000384612 99 ntBASIC1.97□□□□□ -2.09
NR1H4Q96RI1 RNU2-7P-201ENST00000410794 178 ntBASIC1.97□□□□□ -2.09
NR1H4Q96RI1 RPS20P15-201ENST00000412792 311 ntBASIC1.97□□□□□ -2.09
NR1H4Q96RI1 AC016909.1-201ENST00000415916 166 ntBASIC1.97□□□□□ -2.09
NR1H4Q96RI1 HMGN2P19-201ENST00000425149 265 ntBASIC1.97□□□□□ -2.09
NR1H4Q96RI1 RAB28P5-201ENST00000427490 651 ntBASIC1.97□□□□□ -2.09
NR1H4Q96RI1 HMGB3P17-201ENST00000504195 649 ntBASIC1.97□□□□□ -2.09
NR1H4Q96RI1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.97□□□□□ -2.09
NR1H4Q96RI1 RNU6-408P-201ENST00000515910 100 ntBASIC1.97□□□□□ -2.09
NR1H4Q96RI1 SNRPGP18-201ENST00000553000 214 ntBASIC1.97□□□□□ -2.09
NR1H4Q96RI1 AL137100.2-201ENST00000555786 315 ntBASIC1.97□□□□□ -2.09
NR1H4Q96RI1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.97□□□□□ -2.09
NR1H4Q96RI1 RPS29P30-201ENST00000600975 111 ntBASIC1.97□□□□□ -2.09
NR1H4Q96RI1 AC006157.1-201ENST00000611750 366 ntBASIC1.97□□□□□ -2.09
NR1H4Q96RI1 AC091925.1-201ENST00000623204 462 ntBASIC1.97□□□□□ -2.09
NR1H4Q96RI1 AL606534.2-204ENST00000635008 178 ntBASIC1.97□□□□□ -2.09
NR1H4Q96RI1 MIR3674-201ENST00000636576 68 ntBASIC1.97□□□□□ -2.09
NR1H4Q96RI1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
NR1H4Q96RI1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
NR1H4Q96RI1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
NR1H4Q96RI1 MIR369-201ENST00000362155 70 ntBASIC1.96□□□□□ -2.1
NR1H4Q96RI1 Y_RNA.112-201ENST00000363250 102 ntBASIC1.96□□□□□ -2.1
NR1H4Q96RI1 Y_RNA.445-201ENST00000384168 102 ntBASIC1.96□□□□□ -2.1
NR1H4Q96RI1 Y_RNA.496-201ENST00000384444 101 ntBASIC1.96□□□□□ -2.1
NR1H4Q96RI1 Y_RNA.526-201ENST00000384572 110 ntBASIC1.96□□□□□ -2.1
NR1H4Q96RI1 AL117342.1-201ENST00000404861 406 ntBASIC1.96□□□□□ -2.1
NR1H4Q96RI1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.96□□□□□ -2.1
NR1H4Q96RI1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.96□□□□□ -2.1
NR1H4Q96RI1 AL160004.2-201ENST00000432935 350 ntBASIC1.96□□□□□ -2.1
NR1H4Q96RI1 AC099677.2-201ENST00000436385 175 ntBASIC1.96□□□□□ -2.1
NR1H4Q96RI1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.96□□□□□ -2.1
NR1H4Q96RI1 AC234781.5-201ENST00000508429 271 ntBASIC1.96□□□□□ -2.1
NR1H4Q96RI1 MRPS17P9-201ENST00000511924 393 ntBASIC1.96□□□□□ -2.1
NR1H4Q96RI1 RNA5SP200-201ENST00000516360 103 ntBASIC1.96□□□□□ -2.1
NR1H4Q96RI1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.96□□□□□ -2.1
NR1H4Q96RI1 HSBP1P1-201ENST00000555205 166 ntBASIC1.96□□□□□ -2.1
NR1H4Q96RI1 SUB1P4-201ENST00000566062 339 ntBASIC1.96□□□□□ -2.1
NR1H4Q96RI1 MIR3122-201ENST00000577243 73 ntBASIC1.96□□□□□ -2.1
NR1H4Q96RI1 AC006435.5-201ENST00000624486 112 ntBASIC1.96□□□□□ -2.1
NR1H4Q96RI1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NR1H4Q96RI1 MIR410-201ENST00000362222 80 ntBASIC1.95□□□□□ -2.1
NR1H4Q96RI1 MIR520A-201ENST00000384862 85 ntBASIC1.95□□□□□ -2.1
NR1H4Q96RI1 AC009310.1-201ENST00000414414 451 ntBASIC1.95□□□□□ -2.1
NR1H4Q96RI1 RPL31P63-201ENST00000422565 375 ntBASIC1.95□□□□□ -2.1
NR1H4Q96RI1 AC018865.2-201ENST00000423631 129 ntBASIC1.95□□□□□ -2.1
NR1H4Q96RI1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.95□□□□□ -2.1
NR1H4Q96RI1 SNORA40.14-201ENST00000516543 86 ntBASIC1.95□□□□□ -2.1
NR1H4Q96RI1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.95□□□□□ -2.1
NR1H4Q96RI1 AL359075.3-201ENST00000613288 217 ntBASIC1.95□□□□□ -2.1
NR1H4Q96RI1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.95□□□□□ -2.1
NR1H4Q96RI1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.95□□□□□ -2.1
NR1H4Q96RI1 AC010615.1-201ENST00000594254 1764 ntBASIC1.95□□□□□ -2.1
NR1H4Q96RI1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
NR1H4Q96RI1 Y_RNA.287-201ENST00000364853 94 ntBASIC1.94□□□□□ -2.1
NR1H4Q96RI1 SNORD42.2-201ENST00000365570 69 ntBASIC1.94□□□□□ -2.1
NR1H4Q96RI1 Y_RNA.395-201ENST00000383945 109 ntBASIC1.94□□□□□ -2.1
NR1H4Q96RI1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
NR1H4Q96RI1 MRPL35P1-201ENST00000404272 572 ntBASIC1.94□□□□□ -2.1
NR1H4Q96RI1 RNA5SP100-201ENST00000410903 110 ntBASIC1.94□□□□□ -2.1
NR1H4Q96RI1 RNA5SP59-201ENST00000410922 110 ntBASIC1.94□□□□□ -2.1
NR1H4Q96RI1 SDAD1P3-201ENST00000427380 333 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 237.2 ms