Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AC019176.1-201ENST00000518519 225 ntBASIC1.6□□□□□ -2.15
RAB3IPQ96QF0 MIR5701-3-201ENST00000578890 82 ntBASIC1.6□□□□□ -2.15
RAB3IPQ96QF0 MIR5701-1-201ENST00000585138 82 ntBASIC1.6□□□□□ -2.15
RAB3IPQ96QF0 MIR5701-2-201ENST00000615634 82 ntBASIC1.6□□□□□ -2.15
RAB3IPQ96QF0 U6atac.1-201ENST00000616025 117 ntBASIC1.6□□□□□ -2.15
RAB3IPQ96QF0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.6□□□□□ -2.15
RAB3IPQ96QF0 U6.108-201ENST00000637764 58 ntBASIC1.6□□□□□ -2.15
RAB3IPQ96QF0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
RAB3IPQ96QF0 CASC19-280ENST00000642102 1351 ntBASIC1.59□□□□□ -2.15
RAB3IPQ96QF0 RNY1P16-201ENST00000363063 111 ntBASIC1.59□□□□□ -2.15
RAB3IPQ96QF0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
RAB3IPQ96QF0 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
RAB3IPQ96QF0 RNU6-1001P-201ENST00000411265 100 ntBASIC1.59□□□□□ -2.15
RAB3IPQ96QF0 AC023790.1-201ENST00000482174 347 ntBASIC1.59□□□□□ -2.15
RAB3IPQ96QF0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.59□□□□□ -2.15
RAB3IPQ96QF0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.59□□□□□ -2.15
RAB3IPQ96QF0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.59□□□□□ -2.15
RAB3IPQ96QF0 AL121579.1-201ENST00000555129 305 ntBASIC1.59□□□□□ -2.15
RAB3IPQ96QF0 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.59□□□□□ -2.15
RAB3IPQ96QF0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.59□□□□□ -2.15
RAB3IPQ96QF0 Y_RNA.88-201ENST00000363029 99 ntBASIC1.58□□□□□ -2.16
RAB3IPQ96QF0 Y_RNA.339-201ENST00000365325 102 ntBASIC1.58□□□□□ -2.16
RAB3IPQ96QF0 RNU6-767P-201ENST00000384132 107 ntBASIC1.58□□□□□ -2.16
RAB3IPQ96QF0 AC010154.1-201ENST00000425857 269 ntBASIC1.58□□□□□ -2.16
RAB3IPQ96QF0 FGF7P6-202ENST00000451282 293 ntBASIC1.58□□□□□ -2.16
RAB3IPQ96QF0 RPS26P45-201ENST00000471748 340 ntBASIC1.58□□□□□ -2.16
RAB3IPQ96QF0 AC079140.2-201ENST00000506193 142 ntBASIC1.58□□□□□ -2.16
RAB3IPQ96QF0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.58□□□□□ -2.16
RAB3IPQ96QF0 AL137100.2-201ENST00000555786 315 ntBASIC1.58□□□□□ -2.16
RAB3IPQ96QF0 AC090617.3-201ENST00000573670 475 ntBASIC1.58□□□□□ -2.16
RAB3IPQ96QF0 AL929325.1-201ENST00000603096 117 ntBASIC1.58□□□□□ -2.16
RAB3IPQ96QF0 PISRT1.1-201ENST00000616930 107 ntBASIC1.58□□□□□ -2.16
RAB3IPQ96QF0 MIR302D-201ENST00000362275 68 ntBASIC1.57□□□□□ -2.16
RAB3IPQ96QF0 Y_RNA.160-201ENST00000363677 92 ntBASIC1.57□□□□□ -2.16
RAB3IPQ96QF0 Y_RNA.404-201ENST00000383978 102 ntBASIC1.57□□□□□ -2.16
RAB3IPQ96QF0 Y_RNA.482-201ENST00000384377 111 ntBASIC1.57□□□□□ -2.16
RAB3IPQ96QF0 MRPL35P1-201ENST00000404272 572 ntBASIC1.57□□□□□ -2.16
RAB3IPQ96QF0 AL161935.2-201ENST00000414627 60 ntBASIC1.57□□□□□ -2.16
RAB3IPQ96QF0 RPL23AP50-201ENST00000434149 455 ntBASIC1.57□□□□□ -2.16
RAB3IPQ96QF0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.57□□□□□ -2.16
RAB3IPQ96QF0 snoU13.26-201ENST00000459452 105 ntBASIC1.57□□□□□ -2.16
RAB3IPQ96QF0 RNA5SP445-201ENST00000515889 115 ntBASIC1.57□□□□□ -2.16
RAB3IPQ96QF0 RNA5SP182-201ENST00000516064 82 ntBASIC1.57□□□□□ -2.16
RAB3IPQ96QF0 APOOP3-201ENST00000536787 586 ntBASIC1.57□□□□□ -2.16
RAB3IPQ96QF0 AC125232.2-201ENST00000592457 143 ntBASIC1.57□□□□□ -2.16
RAB3IPQ96QF0 AC022432.1-201ENST00000595739 310 ntBASIC1.57□□□□□ -2.16
RAB3IPQ96QF0 AC092794.1-201ENST00000612734 582 ntBASIC1.57□□□□□ -2.16
RAB3IPQ96QF0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 RNU6-874P-201ENST00000362390 105 ntBASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 Y_RNA.364-201ENST00000365532 101 ntBASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 MIR504-201ENST00000385065 83 ntBASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 MIR320A-201ENST00000385302 82 ntBASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 RNA5SP213-201ENST00000391031 106 ntBASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 RNU6-876P-201ENST00000391295 104 ntBASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 RN7SKP101-201ENST00000411376 320 ntBASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 MTCYBP10-201ENST00000424905 650 ntBASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 EIF1P2-201ENST00000428233 350 ntBASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 AC092423.1-201ENST00000430165 186 ntBASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 AL135790.2-201ENST00000437701 267 ntBASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 RPS27P1-201ENST00000450552 247 ntBASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 RPS29P11-201ENST00000496507 171 ntBASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 AC046134.1-201ENST00000514454 666 ntBASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 AC015688.6-201ENST00000577737 104 ntBASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 MIR3937-201ENST00000580135 106 ntBASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 AC022217.4-201ENST00000604389 163 ntBASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 U6.73-201ENST00000619194 103 ntBASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.56□□□□□ -2.16
RAB3IPQ96QF0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 RNU6-879P-201ENST00000364328 108 ntBASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 Y_RNA.248-201ENST00000364501 109 ntBASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 Y_RNA.557-201ENST00000384680 107 ntBASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 MIR194-1-201ENST00000384892 85 ntBASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 Y_RNA.595-201ENST00000410403 105 ntBASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 RNU6-955P-201ENST00000410497 104 ntBASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 AC004965.1-201ENST00000413033 213 ntBASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 UQCRBP2-201ENST00000447827 297 ntBASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 SNORD65B-201ENST00000459126 73 ntBASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 SCARNA16.2-201ENST00000516520 172 ntBASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 RNU6-902P-201ENST00000517212 91 ntBASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 AC105029.1-201ENST00000520250 669 ntBASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 AC023157.2-201ENST00000540596 141 ntBASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 AL442163.3-201ENST00000554110 156 ntBASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 AC110588.1-201ENST00000559699 137 ntBASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RAB3IPQ96QF0 RNA5SP361-201ENST00000362686 118 ntBASIC1.54□□□□□ -2.16
RAB3IPQ96QF0 RNU1-42P-201ENST00000364033 160 ntBASIC1.54□□□□□ -2.16
RAB3IPQ96QF0 MIR329-1-201ENST00000385028 80 ntBASIC1.54□□□□□ -2.16
RAB3IPQ96QF0 Y_RNA.599-201ENST00000410489 109 ntBASIC1.54□□□□□ -2.16
RAB3IPQ96QF0 RPS27P16-201ENST00000425758 201 ntBASIC1.54□□□□□ -2.16
RAB3IPQ96QF0 TOMM22P2-201ENST00000430735 237 ntBASIC1.54□□□□□ -2.16
RAB3IPQ96QF0 AC245517.4-201ENST00000448601 281 ntBASIC1.54□□□□□ -2.16
RAB3IPQ96QF0 U8.22-201ENST00000459141 133 ntBASIC1.54□□□□□ -2.16
RAB3IPQ96QF0 MTND4P17-201ENST00000470444 350 ntBASIC1.54□□□□□ -2.16
RAB3IPQ96QF0 RPS27P22-201ENST00000478056 241 ntBASIC1.54□□□□□ -2.16
RAB3IPQ96QF0 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms