Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 RNU1-117P-201ENST00000517041 158 ntBASIC3.07□□□□□ -1.92
ZSWIM3Q96MP5 AC079600.2-201ENST00000550076 130 ntBASIC3.07□□□□□ -1.92
ZSWIM3Q96MP5 U6.115-201ENST00000636045 103 ntBASIC3.07□□□□□ -1.92
ZSWIM3Q96MP5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.07□□□□□ -1.92
ZSWIM3Q96MP5 AL035425.3-201ENST00000564206 4996 ntBASIC3.07□□□□□ -1.92
ZSWIM3Q96MP5 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ZSWIM3Q96MP5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ZSWIM3Q96MP5 Y_RNA.182-201ENST00000363880 111 ntBASIC3.06□□□□□ -1.92
ZSWIM3Q96MP5 RNU6-449P-201ENST00000383914 107 ntBASIC3.06□□□□□ -1.92
ZSWIM3Q96MP5 RNU6-301P-201ENST00000384277 107 ntBASIC3.06□□□□□ -1.92
ZSWIM3Q96MP5 Y_RNA.568-201ENST00000384742 113 ntBASIC3.06□□□□□ -1.92
ZSWIM3Q96MP5 MIR586-201ENST00000385035 97 ntBASIC3.06□□□□□ -1.92
ZSWIM3Q96MP5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
ZSWIM3Q96MP5 SEPT7P4-201ENST00000437076 306 ntBASIC3.06□□□□□ -1.92
ZSWIM3Q96MP5 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ZSWIM3Q96MP5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
ZSWIM3Q96MP5 AC004832.5-201ENST00000608677 401 ntBASIC3.06□□□□□ -1.92
ZSWIM3Q96MP5 AC134026.1-201ENST00000623249 2239 ntBASIC3.06□□□□□ -1.92
ZSWIM3Q96MP5 SNORA14A-201ENST00000364773 135 ntBASIC3.05□□□□□ -1.92
ZSWIM3Q96MP5 Y_RNA.287-201ENST00000364853 94 ntBASIC3.05□□□□□ -1.92
ZSWIM3Q96MP5 Y_RNA.310-201ENST00000365063 113 ntBASIC3.05□□□□□ -1.92
ZSWIM3Q96MP5 RNU6-131P-201ENST00000391144 107 ntBASIC3.05□□□□□ -1.92
ZSWIM3Q96MP5 EIF4EP4-201ENST00000424916 578 ntBASIC3.05□□□□□ -1.92
ZSWIM3Q96MP5 AL162725.1-201ENST00000435405 301 ntBASIC3.05□□□□□ -1.92
ZSWIM3Q96MP5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
ZSWIM3Q96MP5 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.05□□□□□ -1.92
ZSWIM3Q96MP5 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.05□□□□□ -1.92
ZSWIM3Q96MP5 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 AC062016.1-201ENST00000355719 319 ntBASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 SNORD114-7-201ENST00000362520 77 ntBASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 RNU6-103P-201ENST00000363686 107 ntBASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 snoU2_19.4-201ENST00000364329 80 ntBASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 SNORA51.4-201ENST00000364993 124 ntBASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 CD24P4-201ENST00000382840 243 ntBASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 Y_RNA.456-201ENST00000384232 111 ntBASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 RNU6-1117P-201ENST00000384525 104 ntBASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 MIR548B-201ENST00000385247 97 ntBASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 SNORA12-201ENST00000391162 147 ntBASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 EBAG9P1-201ENST00000418955 543 ntBASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 AC244505.4-201ENST00000434905 287 ntBASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 SSXP5-201ENST00000443473 287 ntBASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 RPL36AP48-201ENST00000485521 314 ntBASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 RNU7-121P-201ENST00000516604 62 ntBASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ZSWIM3Q96MP5 MAPK10-322ENST00000641485 4530 ntBASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 AL136360.1-201ENST00000503377 1900 ntBASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 snoU2_19.1-201ENST00000362361 80 ntBASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 Y_RNA.215-201ENST00000364204 112 ntBASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 Y_RNA.343-201ENST00000365354 112 ntBASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 Y_RNA.488-201ENST00000384403 102 ntBASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 RNU6-851P-201ENST00000384565 107 ntBASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 MIR626-201ENST00000385032 94 ntBASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 RNU6-239P-201ENST00000390990 99 ntBASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 RPL21P3-201ENST00000395517 478 ntBASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 AL109933.2-201ENST00000452651 260 ntBASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 RN7SKP282-201ENST00000516824 299 ntBASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 MIR4431-201ENST00000579990 94 ntBASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 MIR5688-201ENST00000580619 83 ntBASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 FAM35CP-201ENST00000554755 2470 ntBASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.03□□□□□ -1.92
ZSWIM3Q96MP5 RNU6-899P-201ENST00000363947 107 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 RNU6-1048P-201ENST00000364054 107 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 RNU6-1027P-201ENST00000383998 107 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 Y_RNA.497-201ENST00000384447 98 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 RNU6-959P-201ENST00000384671 107 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 MIR29B2-201ENST00000385055 81 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 MIR526A2-201ENST00000390198 65 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 RNU6-578P-201ENST00000390980 103 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 RNU2-51P-201ENST00000410708 197 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 RNA5SP184-201ENST00000411071 108 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 AL139281.1-201ENST00000422120 335 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 AC087499.2-201ENST00000432861 149 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 HMGN2P9-201ENST00000476875 229 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 SRIP1-201ENST00000489235 288 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 RNU6-479P-201ENST00000516348 105 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 SNORD116-25-201ENST00000516517 92 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 AC021269.2-201ENST00000532318 330 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 MIR3684-201ENST00000579779 74 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 AC069294.1-201ENST00000608397 350 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 Y_RNA.778-201ENST00000620203 90 ntBASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
ZSWIM3Q96MP5 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms