Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC112492.4-201ENST00000456549 352 ntBASIC2.56□□□□□ -2
SNX27Q96L92 SNORA4.4-201ENST00000515921 135 ntBASIC2.56□□□□□ -2
SNX27Q96L92 Y_RNA.683-201ENST00000516508 93 ntBASIC2.56□□□□□ -2
SNX27Q96L92 RNU6-344P-201ENST00000516635 111 ntBASIC2.56□□□□□ -2
SNX27Q96L92 RN7SKP49-201ENST00000516675 260 ntBASIC2.56□□□□□ -2
SNX27Q96L92 AC034114.1-201ENST00000520293 285 ntBASIC2.56□□□□□ -2
SNX27Q96L92 RRN3P3-201ENST00000549207 578 ntBASIC2.56□□□□□ -2
SNX27Q96L92 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.56□□□□□ -2
SNX27Q96L92 MIR4452-201ENST00000583004 71 ntBASIC2.56□□□□□ -2
SNX27Q96L92 RPS29P30-201ENST00000600975 111 ntBASIC2.56□□□□□ -2
SNX27Q96L92 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.56□□□□□ -2
SNX27Q96L92 SNORD11B-201ENST00000607707 90 ntBASIC2.56□□□□□ -2
SNX27Q96L92 AL137847.3-201ENST00000611521 109 ntBASIC2.56□□□□□ -2
SNX27Q96L92 MIR6895-201ENST00000613497 78 ntBASIC2.56□□□□□ -2
SNX27Q96L92 AC099654.10-201ENST00000640395 161 ntBASIC2.56□□□□□ -2
SNX27Q96L92 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SNX27Q96L92 Y_RNA.27-201ENST00000362540 103 ntBASIC2.55□□□□□ -2
SNX27Q96L92 Y_RNA.158-201ENST00000363651 101 ntBASIC2.55□□□□□ -2
SNX27Q96L92 RNU1-91P-201ENST00000364746 163 ntBASIC2.55□□□□□ -2
SNX27Q96L92 RNU6-438P-201ENST00000365561 103 ntBASIC2.55□□□□□ -2
SNX27Q96L92 RNU6-639P-201ENST00000384074 107 ntBASIC2.55□□□□□ -2
SNX27Q96L92 RNY3P4-201ENST00000384428 101 ntBASIC2.55□□□□□ -2
SNX27Q96L92 Y_RNA.645-201ENST00000391229 102 ntBASIC2.55□□□□□ -2
SNX27Q96L92 SNORD12B-201ENST00000410433 91 ntBASIC2.55□□□□□ -2
SNX27Q96L92 CYCSP49-201ENST00000420810 319 ntBASIC2.55□□□□□ -2
SNX27Q96L92 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.55□□□□□ -2
SNX27Q96L92 RNA5SP281-201ENST00000516504 135 ntBASIC2.55□□□□□ -2
SNX27Q96L92 CYCSP26-201ENST00000534107 320 ntBASIC2.55□□□□□ -2
SNX27Q96L92 AC104695.3-201ENST00000604052 296 ntBASIC2.55□□□□□ -2
SNX27Q96L92 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.55□□□□□ -2
SNX27Q96L92 Z82195.2-201ENST00000612348 18351 ntBASIC2.55□□□□□ -2
SNX27Q96L92 Y_RNA.422-201ENST00000384054 114 ntBASIC2.54□□□□□ -2
SNX27Q96L92 RNU6-926P-201ENST00000384075 107 ntBASIC2.54□□□□□ -2
SNX27Q96L92 SNORA51.11-201ENST00000384442 131 ntBASIC2.54□□□□□ -2
SNX27Q96L92 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.54□□□□□ -2
SNX27Q96L92 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.54□□□□□ -2
SNX27Q96L92 AC093259.1-201ENST00000509755 300 ntBASIC2.54□□□□□ -2
SNX27Q96L92 AC040926.1-201ENST00000530195 238 ntBASIC2.54□□□□□ -2
SNX27Q96L92 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.54□□□□□ -2
SNX27Q96L92 PRELID2P1-201ENST00000552837 301 ntBASIC2.54□□□□□ -2
SNX27Q96L92 MIR5694-201ENST00000581190 76 ntBASIC2.54□□□□□ -2
SNX27Q96L92 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.54□□□□□ -2
SNX27Q96L92 MIR203B-201ENST00000636080 86 ntBASIC2.54□□□□□ -2
SNX27Q96L92 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
SNX27Q96L92 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.53□□□□□ -2
SNX27Q96L92 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.53□□□□□ -2
SNX27Q96L92 RNU6-1305P-201ENST00000364353 104 ntBASIC2.53□□□□□ -2
SNX27Q96L92 SNORD31B-201ENST00000364977 69 ntBASIC2.53□□□□□ -2
SNX27Q96L92 Y_RNA.389-201ENST00000383924 113 ntBASIC2.53□□□□□ -2
SNX27Q96L92 Y_RNA.415-201ENST00000384012 112 ntBASIC2.53□□□□□ -2
SNX27Q96L92 Y_RNA.526-201ENST00000384572 110 ntBASIC2.53□□□□□ -2
SNX27Q96L92 MIR300-201ENST00000401138 83 ntBASIC2.53□□□□□ -2
SNX27Q96L92 PRELID3BP1-201ENST00000457142 540 ntBASIC2.53□□□□□ -2
SNX27Q96L92 AC010469.2-201ENST00000496412 480 ntBASIC2.53□□□□□ -2
SNX27Q96L92 AC093852.1-201ENST00000503587 266 ntBASIC2.53□□□□□ -2
SNX27Q96L92 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.53□□□□□ -2
SNX27Q96L92 RNA5SP395-201ENST00000516567 118 ntBASIC2.53□□□□□ -2
SNX27Q96L92 CYCSP23-201ENST00000519781 313 ntBASIC2.53□□□□□ -2
SNX27Q96L92 AC011604.1-201ENST00000545978 196 ntBASIC2.53□□□□□ -2
SNX27Q96L92 MIR5007-201ENST00000583098 95 ntBASIC2.53□□□□□ -2
SNX27Q96L92 AC006504.6-201ENST00000590142 199 ntBASIC2.53□□□□□ -2
SNX27Q96L92 AC022432.1-201ENST00000595739 310 ntBASIC2.53□□□□□ -2
SNX27Q96L92 AC124312.5-201ENST00000604451 268 ntBASIC2.53□□□□□ -2
SNX27Q96L92 BX248123.2-201ENST00000606318 124 ntBASIC2.53□□□□□ -2
SNX27Q96L92 AL162373.1-201ENST00000620433 407 ntBASIC2.53□□□□□ -2
SNX27Q96L92 AC068205.3-201ENST00000636385 468 ntBASIC2.53□□□□□ -2
SNX27Q96L92 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.53□□□□□ -2
SNX27Q96L92 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
SNX27Q96L92 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.52□□□□□ -2.01
SNX27Q96L92 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SNX27Q96L92 MIR21-201ENST00000362134 72 ntBASIC2.52□□□□□ -2.01
SNX27Q96L92 RNU6-450P-201ENST00000364654 107 ntBASIC2.52□□□□□ -2.01
SNX27Q96L92 SNORD87-201ENST00000364849 89 ntBASIC2.52□□□□□ -2.01
SNX27Q96L92 RNU1-148P-201ENST00000384472 162 ntBASIC2.52□□□□□ -2.01
SNX27Q96L92 Y_RNA.527-201ENST00000384573 102 ntBASIC2.52□□□□□ -2.01
SNX27Q96L92 RNU6-101P-201ENST00000410323 104 ntBASIC2.52□□□□□ -2.01
SNX27Q96L92 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.52□□□□□ -2.01
SNX27Q96L92 PCNPP5-201ENST00000452246 481 ntBASIC2.52□□□□□ -2.01
SNX27Q96L92 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX27Q96L92 Y_RNA.721-201ENST00000517207 102 ntBASIC2.52□□□□□ -2.01
SNX27Q96L92 MIR3126-201ENST00000577443 74 ntBASIC2.52□□□□□ -2.01
SNX27Q96L92 MIR4680-201ENST00000580906 66 ntBASIC2.52□□□□□ -2.01
SNX27Q96L92 MIR4753-201ENST00000585119 83 ntBASIC2.52□□□□□ -2.01
SNX27Q96L92 AL357075.2-201ENST00000614906 189 ntBASIC2.52□□□□□ -2.01
SNX27Q96L92 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.52□□□□□ -2.01
SNX27Q96L92 U6.92-201ENST00000636464 89 ntBASIC2.52□□□□□ -2.01
SNX27Q96L92 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SNX27Q96L92 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SNX27Q96L92 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SNX27Q96L92 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
SNX27Q96L92 Y_RNA.251-201ENST00000364551 99 ntBASIC2.51□□□□□ -2.01
SNX27Q96L92 SNORA67.2-201ENST00000384300 149 ntBASIC2.51□□□□□ -2.01
SNX27Q96L92 RNU6-823P-201ENST00000391042 103 ntBASIC2.51□□□□□ -2.01
SNX27Q96L92 SNORD78.2-201ENST00000391076 69 ntBASIC2.51□□□□□ -2.01
SNX27Q96L92 MIR1283-1-201ENST00000408494 87 ntBASIC2.51□□□□□ -2.01
SNX27Q96L92 RNA5SP504-201ENST00000410676 117 ntBASIC2.51□□□□□ -2.01
SNX27Q96L92 RNA5SP270-201ENST00000411361 118 ntBASIC2.51□□□□□ -2.01
SNX27Q96L92 UQCRBP2-201ENST00000447827 297 ntBASIC2.51□□□□□ -2.01
SNX27Q96L92 AL137159.1-201ENST00000452808 512 ntBASIC2.51□□□□□ -2.01
SNX27Q96L92 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 207.4 ms