Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNU6-498P-201ENST00000459468 107 ntBASIC2.73□□□□□ -1.97
CHMP4CQ96CF2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.73□□□□□ -1.97
CHMP4CQ96CF2 Y_RNA.715-201ENST00000517082 110 ntBASIC2.73□□□□□ -1.97
CHMP4CQ96CF2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.73□□□□□ -1.97
CHMP4CQ96CF2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.73□□□□□ -1.97
CHMP4CQ96CF2 snoZ196.1-201ENST00000625269 89 ntBASIC2.73□□□□□ -1.97
CHMP4CQ96CF2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CHMP4CQ96CF2 AC009487.4-201ENST00000624969 3585 ntBASIC2.73□□□□□ -1.97
CHMP4CQ96CF2 Y_RNA.380-201ENST00000365663 111 ntBASIC2.72□□□□□ -1.97
CHMP4CQ96CF2 RNU6-57P-201ENST00000411348 103 ntBASIC2.72□□□□□ -1.97
CHMP4CQ96CF2 RAB28P5-201ENST00000427490 651 ntBASIC2.72□□□□□ -1.97
CHMP4CQ96CF2 MTCO1P44-201ENST00000441935 243 ntBASIC2.72□□□□□ -1.97
CHMP4CQ96CF2 AC067942.3-201ENST00000512025 362 ntBASIC2.72□□□□□ -1.97
CHMP4CQ96CF2 RNU1-41P-201ENST00000516161 162 ntBASIC2.72□□□□□ -1.97
CHMP4CQ96CF2 RNU1-48P-201ENST00000516400 162 ntBASIC2.72□□□□□ -1.97
CHMP4CQ96CF2 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.72□□□□□ -1.97
CHMP4CQ96CF2 AK6P2-201ENST00000549020 471 ntBASIC2.72□□□□□ -1.97
CHMP4CQ96CF2 AC022432.1-201ENST00000595739 310 ntBASIC2.72□□□□□ -1.97
CHMP4CQ96CF2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.72□□□□□ -1.97
CHMP4CQ96CF2 AC010205.1-201ENST00000616668 449 ntBASIC2.72□□□□□ -1.97
CHMP4CQ96CF2 MIR6766-201ENST00000622641 72 ntBASIC2.72□□□□□ -1.97
CHMP4CQ96CF2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CHMP4CQ96CF2 AC005336.3-201ENST00000623833 2679 ntBASIC2.72□□□□□ -1.97
CHMP4CQ96CF2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 SNORA3A-201ENST00000364113 130 ntBASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 SNORA72.2-201ENST00000365028 127 ntBASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 Y_RNA.439-201ENST00000384119 94 ntBASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 RNU6-1310P-201ENST00000384153 107 ntBASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 Y_RNA.458-201ENST00000384240 102 ntBASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 RNU6-1160P-201ENST00000384546 104 ntBASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 MIR606-201ENST00000384851 96 ntBASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 MIR1252-201ENST00000408861 65 ntBASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 RNA5SP475-201ENST00000410568 110 ntBASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 RPEP5-201ENST00000441137 268 ntBASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 AC079804.2-201ENST00000490376 200 ntBASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 RNU6-764P-201ENST00000516396 105 ntBASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 AC087441.2-201ENST00000529141 262 ntBASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 AL109918.3-201ENST00000603072 338 ntBASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 MIR3674-201ENST00000636576 68 ntBASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 ZNF658B-202ENST00000615961 3375 ntBASIC2.71□□□□□ -1.98
CHMP4CQ96CF2 RNU6-23P-201ENST00000363283 107 ntBASIC2.7□□□□□ -1.98
CHMP4CQ96CF2 SNORA67.3-201ENST00000384366 140 ntBASIC2.7□□□□□ -1.98
CHMP4CQ96CF2 SNORA48.3-201ENST00000391081 134 ntBASIC2.7□□□□□ -1.98
CHMP4CQ96CF2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.7□□□□□ -1.98
CHMP4CQ96CF2 RPL26P26-201ENST00000480251 434 ntBASIC2.7□□□□□ -1.98
CHMP4CQ96CF2 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.7□□□□□ -1.98
CHMP4CQ96CF2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.7□□□□□ -1.98
CHMP4CQ96CF2 AC113195.1-201ENST00000579952 141 ntBASIC2.7□□□□□ -1.98
CHMP4CQ96CF2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.7□□□□□ -1.98
CHMP4CQ96CF2 AC099654.10-201ENST00000640395 161 ntBASIC2.7□□□□□ -1.98
CHMP4CQ96CF2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CHMP4CQ96CF2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHMP4CQ96CF2 AC245060.5-201ENST00000610778 3293 ntBASIC2.69□□□□□ -1.98
CHMP4CQ96CF2 Y_RNA.152-201ENST00000363578 100 ntBASIC2.69□□□□□ -1.98
CHMP4CQ96CF2 RNU6-961P-201ENST00000363893 105 ntBASIC2.69□□□□□ -1.98
CHMP4CQ96CF2 SNORA70B-201ENST00000384210 135 ntBASIC2.69□□□□□ -1.98
CHMP4CQ96CF2 AL079342.1-201ENST00000401460 267 ntBASIC2.69□□□□□ -1.98
CHMP4CQ96CF2 MIR1185-2-201ENST00000408687 86 ntBASIC2.69□□□□□ -1.98
CHMP4CQ96CF2 RNU6-985P-201ENST00000410182 104 ntBASIC2.69□□□□□ -1.98
CHMP4CQ96CF2 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.69□□□□□ -1.98
CHMP4CQ96CF2 RNU1-131P-201ENST00000458943 161 ntBASIC2.69□□□□□ -1.98
CHMP4CQ96CF2 RPS29P21-201ENST00000496272 170 ntBASIC2.69□□□□□ -1.98
CHMP4CQ96CF2 RNU6-1137P-201ENST00000517073 99 ntBASIC2.69□□□□□ -1.98
CHMP4CQ96CF2 AC005176.2-201ENST00000596933 147 ntBASIC2.69□□□□□ -1.98
CHMP4CQ96CF2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.69□□□□□ -1.98
CHMP4CQ96CF2 AL590240.4-201ENST00000616908 390 ntBASIC2.69□□□□□ -1.98
CHMP4CQ96CF2 MIR6873-201ENST00000622788 63 ntBASIC2.69□□□□□ -1.98
CHMP4CQ96CF2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.69□□□□□ -1.98
CHMP4CQ96CF2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CHMP4CQ96CF2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CHMP4CQ96CF2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHMP4CQ96CF2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
CHMP4CQ96CF2 RNU6-1266P-201ENST00000362794 105 ntBASIC2.68□□□□□ -1.98
CHMP4CQ96CF2 RNU6-1164P-201ENST00000364428 107 ntBASIC2.68□□□□□ -1.98
CHMP4CQ96CF2 MIR221-201ENST00000385135 110 ntBASIC2.68□□□□□ -1.98
CHMP4CQ96CF2 HMGN2P39-201ENST00000398005 273 ntBASIC2.68□□□□□ -1.98
CHMP4CQ96CF2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.68□□□□□ -1.98
CHMP4CQ96CF2 AC008134.1-201ENST00000420943 193 ntBASIC2.68□□□□□ -1.98
CHMP4CQ96CF2 AC018634.1-201ENST00000437554 401 ntBASIC2.68□□□□□ -1.98
CHMP4CQ96CF2 RNU6-221P-201ENST00000459541 99 ntBASIC2.68□□□□□ -1.98
CHMP4CQ96CF2 RNU6-397P-201ENST00000516226 104 ntBASIC2.68□□□□□ -1.98
CHMP4CQ96CF2 RNU6-856P-201ENST00000516959 98 ntBASIC2.68□□□□□ -1.98
CHMP4CQ96CF2 MIR3124-201ENST00000582636 67 ntBASIC2.68□□□□□ -1.98
CHMP4CQ96CF2 AL355297.3-201ENST00000604082 446 ntBASIC2.68□□□□□ -1.98
CHMP4CQ96CF2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.68□□□□□ -1.98
CHMP4CQ96CF2 AC245884.12-201ENST00000615364 59 ntBASIC2.68□□□□□ -1.98
CHMP4CQ96CF2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CHMP4CQ96CF2 AC131280.1-202ENST00000624067 4211 ntBASIC2.68□□□□□ -1.98
CHMP4CQ96CF2 AL159152.1-201ENST00000635019 2587 ntBASIC2.67□□□□□ -1.98
CHMP4CQ96CF2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CHMP4CQ96CF2 MIR340-201ENST00000362125 95 ntBASIC2.67□□□□□ -1.98
CHMP4CQ96CF2 RNU1-58P-201ENST00000362413 163 ntBASIC2.67□□□□□ -1.98
CHMP4CQ96CF2 RNU6-626P-201ENST00000363354 107 ntBASIC2.67□□□□□ -1.98
CHMP4CQ96CF2 SNORD114-6-201ENST00000364393 72 ntBASIC2.67□□□□□ -1.98
CHMP4CQ96CF2 MIR518A2-201ENST00000384966 87 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms