Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RNU6-1001P-201ENST00000411265 100 ntBASIC1.62□□□□□ -2.15
VPS33AQ96AX1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.62□□□□□ -2.15
VPS33AQ96AX1 AC091144.1-201ENST00000519573 138 ntBASIC1.62□□□□□ -2.15
VPS33AQ96AX1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.62□□□□□ -2.15
VPS33AQ96AX1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.62□□□□□ -2.15
VPS33AQ96AX1 MIR3684-201ENST00000579779 74 ntBASIC1.62□□□□□ -2.15
VPS33AQ96AX1 MIR4648-201ENST00000580107 72 ntBASIC1.62□□□□□ -2.15
VPS33AQ96AX1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.62□□□□□ -2.15
VPS33AQ96AX1 AC125232.2-201ENST00000592457 143 ntBASIC1.62□□□□□ -2.15
VPS33AQ96AX1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.62□□□□□ -2.15
VPS33AQ96AX1 U6.73-201ENST00000619194 103 ntBASIC1.62□□□□□ -2.15
VPS33AQ96AX1 AC005858.4-201ENST00000623191 700 ntBASIC1.62□□□□□ -2.15
VPS33AQ96AX1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.62□□□□□ -2.15
VPS33AQ96AX1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.61□□□□□ -2.15
VPS33AQ96AX1 Y_RNA.111-201ENST00000363248 100 ntBASIC1.61□□□□□ -2.15
VPS33AQ96AX1 RNU6-271P-201ENST00000363858 105 ntBASIC1.61□□□□□ -2.15
VPS33AQ96AX1 SNORA4.2-201ENST00000365313 147 ntBASIC1.61□□□□□ -2.15
VPS33AQ96AX1 MT-TL1-201ENST00000386347 75 ntBASIC1.61□□□□□ -2.15
VPS33AQ96AX1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.61□□□□□ -2.15
VPS33AQ96AX1 RPS26P55-201ENST00000471178 356 ntBASIC1.61□□□□□ -2.15
VPS33AQ96AX1 RPL7P42-201ENST00000481005 679 ntBASIC1.61□□□□□ -2.15
VPS33AQ96AX1 AC015688.6-201ENST00000577737 104 ntBASIC1.61□□□□□ -2.15
VPS33AQ96AX1 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.61□□□□□ -2.15
VPS33AQ96AX1 AC095038.3-201ENST00000634439 195 ntBASIC1.61□□□□□ -2.15
VPS33AQ96AX1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
VPS33AQ96AX1 RNU6-1264P-201ENST00000383891 107 ntBASIC1.6□□□□□ -2.15
VPS33AQ96AX1 MIR329-1-201ENST00000385028 80 ntBASIC1.6□□□□□ -2.15
VPS33AQ96AX1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.6□□□□□ -2.15
VPS33AQ96AX1 RNU6-876P-201ENST00000391295 104 ntBASIC1.6□□□□□ -2.15
VPS33AQ96AX1 RPL21P1-201ENST00000399532 476 ntBASIC1.6□□□□□ -2.15
VPS33AQ96AX1 AL353997.1-201ENST00000432936 108 ntBASIC1.6□□□□□ -2.15
VPS33AQ96AX1 RPS27P1-201ENST00000450552 247 ntBASIC1.6□□□□□ -2.15
VPS33AQ96AX1 Y_RNA.635-201ENST00000459041 101 ntBASIC1.6□□□□□ -2.15
VPS33AQ96AX1 RPL31P58-201ENST00000469001 379 ntBASIC1.6□□□□□ -2.15
VPS33AQ96AX1 TRBV12-1-201ENST00000479785 344 ntBASIC1.6□□□□□ -2.15
VPS33AQ96AX1 RPS29P21-201ENST00000496272 170 ntBASIC1.6□□□□□ -2.15
VPS33AQ96AX1 RNU7-99P-201ENST00000516271 62 ntBASIC1.6□□□□□ -2.15
VPS33AQ96AX1 RNU6-107P-201ENST00000516643 102 ntBASIC1.6□□□□□ -2.15
VPS33AQ96AX1 RNU7-128P-201ENST00000517247 62 ntBASIC1.6□□□□□ -2.15
VPS33AQ96AX1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.6□□□□□ -2.15
VPS33AQ96AX1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.6□□□□□ -2.15
VPS33AQ96AX1 FRG2DP-202ENST00000566967 323 ntBASIC1.6□□□□□ -2.15
VPS33AQ96AX1 AC004584.2-201ENST00000570407 410 ntBASIC1.6□□□□□ -2.15
VPS33AQ96AX1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.6□□□□□ -2.15
VPS33AQ96AX1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
VPS33AQ96AX1 MIR8063-201ENST00000621930 81 ntBASIC1.6□□□□□ -2.15
VPS33AQ96AX1 SNORD1A-201ENST00000364968 72 ntBASIC1.59□□□□□ -2.15
VPS33AQ96AX1 Y_RNA.404-201ENST00000383978 102 ntBASIC1.59□□□□□ -2.15
VPS33AQ96AX1 RNU6-203P-201ENST00000384038 104 ntBASIC1.59□□□□□ -2.15
VPS33AQ96AX1 RNU6-1145P-201ENST00000384246 107 ntBASIC1.59□□□□□ -2.15
VPS33AQ96AX1 Y_RNA.500-201ENST00000384466 111 ntBASIC1.59□□□□□ -2.15
VPS33AQ96AX1 RNA5SP109-201ENST00000391010 116 ntBASIC1.59□□□□□ -2.15
VPS33AQ96AX1 SNORA40.18-201ENST00000391200 128 ntBASIC1.59□□□□□ -2.15
VPS33AQ96AX1 SNORA75.4-201ENST00000391278 119 ntBASIC1.59□□□□□ -2.15
VPS33AQ96AX1 UQCRBP2-201ENST00000447827 297 ntBASIC1.59□□□□□ -2.15
VPS33AQ96AX1 RNU7-87P-201ENST00000459343 62 ntBASIC1.59□□□□□ -2.15
VPS33AQ96AX1 RNU7-34P-201ENST00000459394 64 ntBASIC1.59□□□□□ -2.15
VPS33AQ96AX1 RNU7-94P-201ENST00000459576 63 ntBASIC1.59□□□□□ -2.15
VPS33AQ96AX1 RPL17P19-201ENST00000489069 552 ntBASIC1.59□□□□□ -2.15
VPS33AQ96AX1 AC079140.2-201ENST00000506193 142 ntBASIC1.59□□□□□ -2.15
VPS33AQ96AX1 AC074133.1-201ENST00000515696 183 ntBASIC1.59□□□□□ -2.15
VPS33AQ96AX1 RNU6-902P-201ENST00000517212 91 ntBASIC1.59□□□□□ -2.15
VPS33AQ96AX1 AC022306.2-201ENST00000617563 647 ntBASIC1.59□□□□□ -2.15
VPS33AQ96AX1 AC092794.2-201ENST00000620933 563 ntBASIC1.59□□□□□ -2.15
VPS33AQ96AX1 RNU6-874P-201ENST00000362390 105 ntBASIC1.58□□□□□ -2.16
VPS33AQ96AX1 Y_RNA.557-201ENST00000384680 107 ntBASIC1.58□□□□□ -2.16
VPS33AQ96AX1 AC027119.1-201ENST00000440877 241 ntBASIC1.58□□□□□ -2.16
VPS33AQ96AX1 MRPS10P1-201ENST00000448483 130 ntBASIC1.58□□□□□ -2.16
VPS33AQ96AX1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.58□□□□□ -2.16
VPS33AQ96AX1 SNORD65B-201ENST00000459126 73 ntBASIC1.58□□□□□ -2.16
VPS33AQ96AX1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.58□□□□□ -2.16
VPS33AQ96AX1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.58□□□□□ -2.16
VPS33AQ96AX1 AC010598.1-201ENST00000510378 103 ntBASIC1.58□□□□□ -2.16
VPS33AQ96AX1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.58□□□□□ -2.16
VPS33AQ96AX1 RNA5SP182-201ENST00000516064 82 ntBASIC1.58□□□□□ -2.16
VPS33AQ96AX1 RNU6-970P-201ENST00000516312 107 ntBASIC1.58□□□□□ -2.16
VPS33AQ96AX1 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.58□□□□□ -2.16
VPS33AQ96AX1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.58□□□□□ -2.16
VPS33AQ96AX1 AC104260.1-201ENST00000616660 539 ntBASIC1.58□□□□□ -2.16
VPS33AQ96AX1 AC084768.2-201ENST00000622736 221 ntBASIC1.58□□□□□ -2.16
VPS33AQ96AX1 RNU6-1123P-201ENST00000362347 106 ntBASIC1.57□□□□□ -2.16
VPS33AQ96AX1 U8.2-201ENST00000363156 134 ntBASIC1.57□□□□□ -2.16
VPS33AQ96AX1 RNU6-331P-201ENST00000384724 107 ntBASIC1.57□□□□□ -2.16
VPS33AQ96AX1 RNU11-5P-201ENST00000391216 129 ntBASIC1.57□□□□□ -2.16
VPS33AQ96AX1 RNU6-1186P-201ENST00000410429 97 ntBASIC1.57□□□□□ -2.16
VPS33AQ96AX1 AC004965.1-201ENST00000413033 213 ntBASIC1.57□□□□□ -2.16
VPS33AQ96AX1 PDCL2P1-201ENST00000419302 352 ntBASIC1.57□□□□□ -2.16
VPS33AQ96AX1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.57□□□□□ -2.16
VPS33AQ96AX1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.57□□□□□ -2.16
VPS33AQ96AX1 SCARNA16.2-201ENST00000516520 172 ntBASIC1.57□□□□□ -2.16
VPS33AQ96AX1 RN7SKP49-201ENST00000516675 260 ntBASIC1.57□□□□□ -2.16
VPS33AQ96AX1 MIR2355-201ENST00000517199 87 ntBASIC1.57□□□□□ -2.16
VPS33AQ96AX1 AC022217.4-201ENST00000604389 163 ntBASIC1.57□□□□□ -2.16
VPS33AQ96AX1 MIR8081-201ENST00000611533 95 ntBASIC1.57□□□□□ -2.16
VPS33AQ96AX1 AL669831.3-213ENST00000636676 183 ntBASIC1.57□□□□□ -2.16
VPS33AQ96AX1 TPTEP1-208ENST00000636884 213 ntBASIC1.57□□□□□ -2.16
VPS33AQ96AX1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
VPS33AQ96AX1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.57□□□□□ -2.16
VPS33AQ96AX1 MIR410-201ENST00000362222 80 ntBASIC1.56□□□□□ -2.16
VPS33AQ96AX1 RNU6-879P-201ENST00000364328 108 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms