Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC008507.4-201ENST00000585464 127 ntBASIC4.09□□□□□ -1.75
HLA-CQ95604 MIR8069-1-201ENST00000616627 86 ntBASIC4.09□□□□□ -1.75
HLA-CQ95604 MIR8069-2-201ENST00000621412 86 ntBASIC4.09□□□□□ -1.75
HLA-CQ95604 AC140113.4-201ENST00000622087 222 ntBASIC4.09□□□□□ -1.75
HLA-CQ95604 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-CQ95604 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-CQ95604 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.76
HLA-CQ95604 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HLA-CQ95604 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-CQ95604 AL672167.1-203ENST00000641299 2975 ntBASIC4.08□□□□□ -1.76
HLA-CQ95604 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-CQ95604 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-CQ95604 RNU1-96P-201ENST00000364163 162 ntBASIC4.08□□□□□ -1.76
HLA-CQ95604 SNORA38.1-201ENST00000364172 131 ntBASIC4.08□□□□□ -1.76
HLA-CQ95604 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HLA-CQ95604 MIR1253-201ENST00000408273 105 ntBASIC4.08□□□□□ -1.76
HLA-CQ95604 RNA5SP120-201ENST00000410900 112 ntBASIC4.08□□□□□ -1.76
HLA-CQ95604 DBIP2-201ENST00000419076 262 ntBASIC4.08□□□□□ -1.76
HLA-CQ95604 MICF-203ENST00000432679 129 ntBASIC4.08□□□□□ -1.76
HLA-CQ95604 AC009969.1-201ENST00000438726 172 ntBASIC4.08□□□□□ -1.76
HLA-CQ95604 AC025750.2-201ENST00000442609 450 ntBASIC4.08□□□□□ -1.76
HLA-CQ95604 HMGN2P18-201ENST00000450680 270 ntBASIC4.08□□□□□ -1.76
HLA-CQ95604 RNA5SP490-201ENST00000517141 136 ntBASIC4.08□□□□□ -1.76
HLA-CQ95604 RNU6-1231P-201ENST00000517185 103 ntBASIC4.08□□□□□ -1.76
HLA-CQ95604 Y_RNA.818-201ENST00000618813 71 ntBASIC4.08□□□□□ -1.76
HLA-CQ95604 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-CQ95604 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-CQ95604 AC018630.2-201ENST00000534866 2403 ntBASIC4.07□□□□□ -1.76
HLA-CQ95604 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-CQ95604 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-CQ95604 AC080128.1-201ENST00000474389 1917 ntBASIC4.07□□□□□ -1.76
HLA-CQ95604 RNA5SP295-201ENST00000362655 121 ntBASIC4.07□□□□□ -1.76
HLA-CQ95604 Y_RNA.213-201ENST00000364178 111 ntBASIC4.07□□□□□ -1.76
HLA-CQ95604 Y_RNA.549-201ENST00000384657 102 ntBASIC4.07□□□□□ -1.76
HLA-CQ95604 AP000567.1-201ENST00000406413 156 ntBASIC4.07□□□□□ -1.76
HLA-CQ95604 ATP5A1P2-201ENST00000412323 255 ntBASIC4.07□□□□□ -1.76
HLA-CQ95604 SNRPGP13-201ENST00000442212 177 ntBASIC4.07□□□□□ -1.76
HLA-CQ95604 SNORD105B-201ENST00000458770 79 ntBASIC4.07□□□□□ -1.76
HLA-CQ95604 RN7SL585P-201ENST00000470538 280 ntBASIC4.07□□□□□ -1.76
HLA-CQ95604 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-CQ95604 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-CQ95604 AC244505.7-201ENST00000599675 272 ntBASIC4.07□□□□□ -1.76
HLA-CQ95604 U2.20-201ENST00000613956 192 ntBASIC4.07□□□□□ -1.76
HLA-CQ95604 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-CQ95604 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-CQ95604 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HLA-CQ95604 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-CQ95604 FAM35DP-201ENST00000323387 2712 ntBASIC4.07□□□□□ -1.76
HLA-CQ95604 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-CQ95604 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-CQ95604 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-CQ95604 RNU1-72P-201ENST00000362976 153 ntBASIC4.06□□□□□ -1.76
HLA-CQ95604 Y_RNA.366-201ENST00000365540 102 ntBASIC4.06□□□□□ -1.76
HLA-CQ95604 MIR1289-1-201ENST00000408836 144 ntBASIC4.06□□□□□ -1.76
HLA-CQ95604 SNRPGP10-201ENST00000432323 225 ntBASIC4.06□□□□□ -1.76
HLA-CQ95604 RPS15AP28-201ENST00000435088 386 ntBASIC4.06□□□□□ -1.76
HLA-CQ95604 AC069285.2-201ENST00000440210 275 ntBASIC4.06□□□□□ -1.76
HLA-CQ95604 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-CQ95604 RNA5SP164-201ENST00000516533 110 ntBASIC4.06□□□□□ -1.76
HLA-CQ95604 MIR5197-201ENST00000583721 112 ntBASIC4.06□□□□□ -1.76
HLA-CQ95604 MIR8057-201ENST00000620957 69 ntBASIC4.06□□□□□ -1.76
HLA-CQ95604 MIR2052-201ENST00000636055 55 ntBASIC4.06□□□□□ -1.76
HLA-CQ95604 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-CQ95604 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-CQ95604 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-CQ95604 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-CQ95604 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-CQ95604 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-CQ95604 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-CQ95604 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-CQ95604 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-CQ95604 Y_RNA.78-201ENST00000362970 110 ntBASIC4.05□□□□□ -1.76
HLA-CQ95604 RNU6-1131P-201ENST00000364955 107 ntBASIC4.05□□□□□ -1.76
HLA-CQ95604 Y_RNA.410-201ENST00000383992 113 ntBASIC4.05□□□□□ -1.76
HLA-CQ95604 Y_RNA.510-201ENST00000384511 114 ntBASIC4.05□□□□□ -1.76
HLA-CQ95604 MIR759-201ENST00000390224 91 ntBASIC4.05□□□□□ -1.76
HLA-CQ95604 SNORD77.3-201ENST00000391113 65 ntBASIC4.05□□□□□ -1.76
HLA-CQ95604 RPL23AP48-201ENST00000406913 488 ntBASIC4.05□□□□□ -1.76
HLA-CQ95604 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.05□□□□□ -1.76
HLA-CQ95604 VWA8P1-201ENST00000510889 176 ntBASIC4.05□□□□□ -1.76
HLA-CQ95604 AC011406.1-201ENST00000512440 370 ntBASIC4.05□□□□□ -1.76
HLA-CQ95604 AC096725.1-201ENST00000514266 313 ntBASIC4.05□□□□□ -1.76
HLA-CQ95604 RNU6-1270P-201ENST00000517128 108 ntBASIC4.05□□□□□ -1.76
HLA-CQ95604 MIR7157-201ENST00000635801 60 ntBASIC4.05□□□□□ -1.76
HLA-CQ95604 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-CQ95604 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-CQ95604 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-CQ95604 ZNF962P-201ENST00000443465 3140 ntBASIC4.04□□□□□ -1.76
HLA-CQ95604 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
HLA-CQ95604 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HLA-CQ95604 Y_RNA.253-201ENST00000364562 112 ntBASIC4.04□□□□□ -1.76
HLA-CQ95604 AC123900.1-201ENST00000420390 96 ntBASIC4.04□□□□□ -1.76
HLA-CQ95604 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-CQ95604 AL031183.1-201ENST00000457667 207 ntBASIC4.04□□□□□ -1.76
HLA-CQ95604 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.04□□□□□ -1.76
HLA-CQ95604 RNU6-693P-201ENST00000516134 107 ntBASIC4.04□□□□□ -1.76
HLA-CQ95604 RN7SKP43-201ENST00000516173 320 ntBASIC4.04□□□□□ -1.76
HLA-CQ95604 RNU7-99P-201ENST00000516271 62 ntBASIC4.04□□□□□ -1.76
HLA-CQ95604 AC022695.1-201ENST00000522089 237 ntBASIC4.04□□□□□ -1.76
HLA-CQ95604 IGKV3-31-201ENST00000523109 329 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms