Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 RNU6-717P-201ENST00000459076 104 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 SNORD13-201ENST00000459299 104 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 AC114982.1-201ENST00000469402 321 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 HMGN2P9-201ENST00000476875 229 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.29□□□□□ -2.04
USP38Q8NB14 SNORA31.25-201ENST00000517242 134 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 AC091144.1-201ENST00000519573 138 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.29□□□□□ -2.04
USP38Q8NB14 MIR4529-201ENST00000578110 78 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 AC087588.2-201ENST00000617667 426 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 AL162373.1-201ENST00000620433 407 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USP38Q8NB14 RNA5SP361-201ENST00000362686 118 ntBASIC2.28□□□□□ -2.04
USP38Q8NB14 Y_RNA.460-201ENST00000384255 102 ntBASIC2.28□□□□□ -2.04
USP38Q8NB14 RNY1P14-201ENST00000384426 108 ntBASIC2.28□□□□□ -2.04
USP38Q8NB14 SNORA40.19-201ENST00000390846 128 ntBASIC2.28□□□□□ -2.04
USP38Q8NB14 RNA5SP338-201ENST00000410495 85 ntBASIC2.28□□□□□ -2.04
USP38Q8NB14 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
USP38Q8NB14 RNA5SP233-201ENST00000459153 113 ntBASIC2.28□□□□□ -2.04
USP38Q8NB14 AC010531.2-201ENST00000465012 153 ntBASIC2.28□□□□□ -2.04
USP38Q8NB14 RNA5SP182-201ENST00000516064 82 ntBASIC2.28□□□□□ -2.04
USP38Q8NB14 Y_RNA.683-201ENST00000516508 93 ntBASIC2.28□□□□□ -2.04
USP38Q8NB14 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.28□□□□□ -2.04
USP38Q8NB14 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.28□□□□□ -2.04
USP38Q8NB14 AC007229.1-201ENST00000590455 412 ntBASIC2.28□□□□□ -2.04
USP38Q8NB14 AC125232.2-201ENST00000592457 143 ntBASIC2.28□□□□□ -2.04
USP38Q8NB14 CYP2C61P-201ENST00000604072 290 ntBASIC2.28□□□□□ -2.04
USP38Q8NB14 AL359314.1-201ENST00000616913 261 ntBASIC2.28□□□□□ -2.04
USP38Q8NB14 SDR42E1P4-201ENST00000620894 481 ntBASIC2.28□□□□□ -2.04
USP38Q8NB14 AC090971.5-201ENST00000621102 293 ntBASIC2.28□□□□□ -2.04
USP38Q8NB14 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.28□□□□□ -2.04
USP38Q8NB14 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
USP38Q8NB14 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.27□□□□□ -2.05
USP38Q8NB14 RNU6-1115P-201ENST00000362490 106 ntBASIC2.27□□□□□ -2.05
USP38Q8NB14 Y_RNA.535-201ENST00000384612 99 ntBASIC2.27□□□□□ -2.05
USP38Q8NB14 MIR586-201ENST00000385035 97 ntBASIC2.27□□□□□ -2.05
USP38Q8NB14 Y_RNA.592-201ENST00000410274 109 ntBASIC2.27□□□□□ -2.05
USP38Q8NB14 AL356379.1-201ENST00000414105 126 ntBASIC2.27□□□□□ -2.05
USP38Q8NB14 AL021397.1-201ENST00000451806 248 ntBASIC2.27□□□□□ -2.05
USP38Q8NB14 RNU7-57P-201ENST00000459540 60 ntBASIC2.27□□□□□ -2.05
USP38Q8NB14 HMGN1P13-201ENST00000505795 138 ntBASIC2.27□□□□□ -2.05
USP38Q8NB14 AC110588.1-201ENST00000559699 137 ntBASIC2.27□□□□□ -2.05
USP38Q8NB14 AC068205.3-201ENST00000636385 468 ntBASIC2.27□□□□□ -2.05
USP38Q8NB14 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
USP38Q8NB14 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
USP38Q8NB14 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
USP38Q8NB14 RNU1-58P-201ENST00000362413 163 ntBASIC2.26□□□□□ -2.05
USP38Q8NB14 Y_RNA.112-201ENST00000363250 102 ntBASIC2.26□□□□□ -2.05
USP38Q8NB14 RNA5SP493-201ENST00000364115 91 ntBASIC2.26□□□□□ -2.05
USP38Q8NB14 RNU6-57P-201ENST00000411348 103 ntBASIC2.26□□□□□ -2.05
USP38Q8NB14 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.26□□□□□ -2.05
USP38Q8NB14 MTND4P28-201ENST00000426217 387 ntBASIC2.26□□□□□ -2.05
USP38Q8NB14 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.26□□□□□ -2.05
USP38Q8NB14 UQCRBP2-201ENST00000447827 297 ntBASIC2.26□□□□□ -2.05
USP38Q8NB14 AC025033.1-201ENST00000463883 194 ntBASIC2.26□□□□□ -2.05
USP38Q8NB14 RNU6-976P-201ENST00000516086 111 ntBASIC2.26□□□□□ -2.05
USP38Q8NB14 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.26□□□□□ -2.05
USP38Q8NB14 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.26□□□□□ -2.05
USP38Q8NB14 AL080274.1-201ENST00000605565 220 ntBASIC2.26□□□□□ -2.05
USP38Q8NB14 BX248123.2-201ENST00000606318 124 ntBASIC2.26□□□□□ -2.05
USP38Q8NB14 AC083806.3-201ENST00000614016 455 ntBASIC2.26□□□□□ -2.05
USP38Q8NB14 AL160413.1-201ENST00000622780 310 ntBASIC2.26□□□□□ -2.05
USP38Q8NB14 AC091932.3-201ENST00000624223 323 ntBASIC2.26□□□□□ -2.05
USP38Q8NB14 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.26□□□□□ -2.05
USP38Q8NB14 AL359851.1-201ENST00000569460 4997 ntBASIC2.26□□□□□ -2.05
USP38Q8NB14 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.25□□□□□ -2.05
USP38Q8NB14 AL159152.1-201ENST00000635019 2587 ntBASIC2.25□□□□□ -2.05
USP38Q8NB14 Y_RNA.197-201ENST00000364004 102 ntBASIC2.25□□□□□ -2.05
USP38Q8NB14 RNA5SP160-201ENST00000364866 120 ntBASIC2.25□□□□□ -2.05
USP38Q8NB14 RNA5SP138-201ENST00000365098 114 ntBASIC2.25□□□□□ -2.05
USP38Q8NB14 RNA5SP190-201ENST00000365222 118 ntBASIC2.25□□□□□ -2.05
USP38Q8NB14 RNA5SP504-201ENST00000410676 117 ntBASIC2.25□□□□□ -2.05
USP38Q8NB14 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.25□□□□□ -2.05
USP38Q8NB14 RNU6-948P-201ENST00000516374 107 ntBASIC2.25□□□□□ -2.05
USP38Q8NB14 AC092447.9-201ENST00000603395 144 ntBASIC2.25□□□□□ -2.05
USP38Q8NB14 AC006157.1-201ENST00000611750 366 ntBASIC2.25□□□□□ -2.05
USP38Q8NB14 U2.1-201ENST00000618978 145 ntBASIC2.25□□□□□ -2.05
USP38Q8NB14 RNA5SP276-201ENST00000362580 94 ntBASIC2.24□□□□□ -2.05
USP38Q8NB14 RNU4-42P-201ENST00000364738 142 ntBASIC2.24□□□□□ -2.05
USP38Q8NB14 RNU6-926P-201ENST00000384075 107 ntBASIC2.24□□□□□ -2.05
USP38Q8NB14 RNU6-975P-201ENST00000384296 105 ntBASIC2.24□□□□□ -2.05
USP38Q8NB14 MIR329-1-201ENST00000385028 80 ntBASIC2.24□□□□□ -2.05
USP38Q8NB14 MIR1276-201ENST00000408707 83 ntBASIC2.24□□□□□ -2.05
USP38Q8NB14 MTCO1P44-201ENST00000441935 243 ntBASIC2.24□□□□□ -2.05
USP38Q8NB14 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.24□□□□□ -2.05
USP38Q8NB14 RNU1-40P-201ENST00000516816 164 ntBASIC2.24□□□□□ -2.05
USP38Q8NB14 RNU1-97P-201ENST00000516872 164 ntBASIC2.24□□□□□ -2.05
USP38Q8NB14 RNU2-19P-201ENST00000517288 84 ntBASIC2.24□□□□□ -2.05
USP38Q8NB14 AC006600.1-201ENST00000572529 153 ntBASIC2.24□□□□□ -2.05
USP38Q8NB14 AC006001.4-201ENST00000622243 395 ntBASIC2.24□□□□□ -2.05
USP38Q8NB14 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
USP38Q8NB14 MTND4P1-201ENST00000457501 1466 ntBASIC2.23□□□□□ -2.05
USP38Q8NB14 MIR340-201ENST00000362125 95 ntBASIC2.23□□□□□ -2.05
USP38Q8NB14 Y_RNA.5-201ENST00000362334 102 ntBASIC2.23□□□□□ -2.05
USP38Q8NB14 SNORA16B-201ENST00000364674 135 ntBASIC2.23□□□□□ -2.05
USP38Q8NB14 Y_RNA.445-201ENST00000384168 102 ntBASIC2.23□□□□□ -2.05
USP38Q8NB14 SNORA67.2-201ENST00000384300 149 ntBASIC2.23□□□□□ -2.05
USP38Q8NB14 MIR548B-201ENST00000385247 97 ntBASIC2.23□□□□□ -2.05
USP38Q8NB14 RNU6-308P-201ENST00000390957 107 ntBASIC2.23□□□□□ -2.05
USP38Q8NB14 MIR1283-2-201ENST00000408621 87 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms