Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RNU6-159P-201ENST00000391080 106 ntBASIC1.78□□□□□ -2.12
RTL3Q8N8U3 AC007098.1-201ENST00000420122 367 ntBASIC1.78□□□□□ -2.12
RTL3Q8N8U3 RPL31P63-201ENST00000422565 375 ntBASIC1.78□□□□□ -2.12
RTL3Q8N8U3 PMCHL1-202ENST00000423102 261 ntBASIC1.78□□□□□ -2.12
RTL3Q8N8U3 RPL23AP50-201ENST00000434149 455 ntBASIC1.78□□□□□ -2.12
RTL3Q8N8U3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.78□□□□□ -2.12
RTL3Q8N8U3 TOMM22P6-201ENST00000465035 409 ntBASIC1.78□□□□□ -2.12
RTL3Q8N8U3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.78□□□□□ -2.12
RTL3Q8N8U3 RNU6-1198P-201ENST00000516904 67 ntBASIC1.78□□□□□ -2.12
RTL3Q8N8U3 Y_RNA.706-201ENST00000516933 99 ntBASIC1.78□□□□□ -2.12
RTL3Q8N8U3 RNU6-250P-201ENST00000516958 103 ntBASIC1.78□□□□□ -2.12
RTL3Q8N8U3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.78□□□□□ -2.12
RTL3Q8N8U3 AC020661.2-201ENST00000560114 134 ntBASIC1.78□□□□□ -2.12
RTL3Q8N8U3 MIR3122-201ENST00000577243 73 ntBASIC1.78□□□□□ -2.12
RTL3Q8N8U3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.78□□□□□ -2.12
RTL3Q8N8U3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
RTL3Q8N8U3 SNORD31B-201ENST00000364977 69 ntBASIC1.77□□□□□ -2.13
RTL3Q8N8U3 MIR10B-201ENST00000385011 110 ntBASIC1.77□□□□□ -2.13
RTL3Q8N8U3 MIR30A-201ENST00000385092 71 ntBASIC1.77□□□□□ -2.13
RTL3Q8N8U3 RNU6-1093P-201ENST00000391194 107 ntBASIC1.77□□□□□ -2.13
RTL3Q8N8U3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.77□□□□□ -2.13
RTL3Q8N8U3 Y_RNA.631-201ENST00000459607 101 ntBASIC1.77□□□□□ -2.13
RTL3Q8N8U3 AP000870.1-201ENST00000472927 406 ntBASIC1.77□□□□□ -2.13
RTL3Q8N8U3 RPS23P5-201ENST00000495419 428 ntBASIC1.77□□□□□ -2.13
RTL3Q8N8U3 AC105758.1-201ENST00000506038 399 ntBASIC1.77□□□□□ -2.13
RTL3Q8N8U3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.77□□□□□ -2.13
RTL3Q8N8U3 HSBP1P1-201ENST00000555205 166 ntBASIC1.77□□□□□ -2.13
RTL3Q8N8U3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.77□□□□□ -2.13
RTL3Q8N8U3 AC026470.2-201ENST00000561492 181 ntBASIC1.77□□□□□ -2.13
RTL3Q8N8U3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.77□□□□□ -2.13
RTL3Q8N8U3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.77□□□□□ -2.13
RTL3Q8N8U3 MIR1244-1-201ENST00000612829 85 ntBASIC1.77□□□□□ -2.13
RTL3Q8N8U3 MIR1244-3-201ENST00000635744 85 ntBASIC1.77□□□□□ -2.13
RTL3Q8N8U3 MIR1244-2-201ENST00000636449 85 ntBASIC1.77□□□□□ -2.13
RTL3Q8N8U3 MIR1244-4-202ENST00000636813 85 ntBASIC1.77□□□□□ -2.13
RTL3Q8N8U3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.77□□□□□ -2.13
RTL3Q8N8U3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.76□□□□□ -2.13
RTL3Q8N8U3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
RTL3Q8N8U3 Y_RNA.106-201ENST00000363189 100 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 SNORD48-201ENST00000364953 64 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 RNU6-245P-201ENST00000384020 107 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 Y_RNA.428-201ENST00000384078 102 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 MIR625-201ENST00000385047 85 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
RTL3Q8N8U3 MIR548P-201ENST00000408336 84 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 AC004866.1-201ENST00000411748 78 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.76□□□□□ -2.13
RTL3Q8N8U3 CYCSP49-201ENST00000420810 319 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 MTCO2P12-201ENST00000427426 682 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 EIF1P2-201ENST00000428233 350 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.76□□□□□ -2.13
RTL3Q8N8U3 CHEK2P4-201ENST00000450340 246 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.76□□□□□ -2.13
RTL3Q8N8U3 RNU6-1114P-201ENST00000516022 107 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 RNU6-911P-201ENST00000516523 104 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 RNU7-4P-201ENST00000516961 62 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 Y_RNA.711-201ENST00000516993 102 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
RTL3Q8N8U3 AC090617.3-201ENST00000573670 475 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 AC024614.2-201ENST00000577584 372 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 MIR4255-201ENST00000579351 72 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 AC012493.3-201ENST00000604494 112 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.76□□□□□ -2.13
RTL3Q8N8U3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.76□□□□□ -2.13
RTL3Q8N8U3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.76□□□□□ -2.13
RTL3Q8N8U3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
RTL3Q8N8U3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RTL3Q8N8U3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.75□□□□□ -2.13
RTL3Q8N8U3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
RTL3Q8N8U3 RNU6-661P-201ENST00000362409 107 ntBASIC1.75□□□□□ -2.13
RTL3Q8N8U3 RNU6-222P-201ENST00000362438 107 ntBASIC1.75□□□□□ -2.13
RTL3Q8N8U3 Y_RNA.31-201ENST00000362574 102 ntBASIC1.75□□□□□ -2.13
RTL3Q8N8U3 RNU4-42P-201ENST00000364738 142 ntBASIC1.75□□□□□ -2.13
RTL3Q8N8U3 Y_RNA.445-201ENST00000384168 102 ntBASIC1.75□□□□□ -2.13
RTL3Q8N8U3 RNY1P14-201ENST00000384426 108 ntBASIC1.75□□□□□ -2.13
RTL3Q8N8U3 MIR1302-11-201ENST00000408051 138 ntBASIC1.75□□□□□ -2.13
RTL3Q8N8U3 MIR1302-9-201ENST00000408365 138 ntBASIC1.75□□□□□ -2.13
RTL3Q8N8U3 MIR1302-10-201ENST00000408734 138 ntBASIC1.75□□□□□ -2.13
RTL3Q8N8U3 Y_RNA.592-201ENST00000410274 109 ntBASIC1.75□□□□□ -2.13
RTL3Q8N8U3 AC092423.1-201ENST00000430165 186 ntBASIC1.75□□□□□ -2.13
RTL3Q8N8U3 AC007395.1-201ENST00000451333 677 ntBASIC1.75□□□□□ -2.13
RTL3Q8N8U3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.75□□□□□ -2.13
RTL3Q8N8U3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.75□□□□□ -2.13
RTL3Q8N8U3 RNU6-1153P-201ENST00000516760 105 ntBASIC1.75□□□□□ -2.13
RTL3Q8N8U3 SNORD116.3-201ENST00000517176 78 ntBASIC1.75□□□□□ -2.13
RTL3Q8N8U3 MIR2355-201ENST00000517199 87 ntBASIC1.75□□□□□ -2.13
RTL3Q8N8U3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.75□□□□□ -2.13
RTL3Q8N8U3 SUB1P4-201ENST00000566062 339 ntBASIC1.75□□□□□ -2.13
RTL3Q8N8U3 MIR5094-201ENST00000578766 85 ntBASIC1.75□□□□□ -2.13
RTL3Q8N8U3 AL356055.1-201ENST00000602528 446 ntBASIC1.75□□□□□ -2.13
RTL3Q8N8U3 MIR1302-2-201ENST00000607096 138 ntBASIC1.75□□□□□ -2.13
RTL3Q8N8U3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.75□□□□□ -2.13
RTL3Q8N8U3 AC005562.2-201ENST00000618264 111 ntBASIC1.75□□□□□ -2.13
RTL3Q8N8U3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.75□□□□□ -2.13
RTL3Q8N8U3 MTND5P16-201ENST00000460269 1703 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 Y_RNA.132-201ENST00000363421 102 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 RNU6-281P-201ENST00000384212 103 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 Y_RNA.557-201ENST00000384680 107 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 MIR504-201ENST00000385065 83 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms