Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RNA5SP306-201ENST00000411087 107 ntBASIC4.15□□□□□ -1.75
SCUBE3Q8IX30 DBIP2-201ENST00000419076 262 ntBASIC4.15□□□□□ -1.75
SCUBE3Q8IX30 Z98742.2-201ENST00000431564 187 ntBASIC4.15□□□□□ -1.75
SCUBE3Q8IX30 RNU6-65P-201ENST00000516332 98 ntBASIC4.15□□□□□ -1.75
SCUBE3Q8IX30 SNORA74D-201ENST00000516404 141 ntBASIC4.15□□□□□ -1.75
SCUBE3Q8IX30 RNU2-34P-201ENST00000516534 121 ntBASIC4.15□□□□□ -1.75
SCUBE3Q8IX30 AP000867.2-201ENST00000532468 320 ntBASIC4.15□□□□□ -1.75
SCUBE3Q8IX30 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.15□□□□□ -1.75
SCUBE3Q8IX30 AL606490.9-201ENST00000603331 271 ntBASIC4.15□□□□□ -1.75
SCUBE3Q8IX30 AC007179.3-201ENST00000604976 235 ntBASIC4.15□□□□□ -1.75
SCUBE3Q8IX30 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.15□□□□□ -1.75
SCUBE3Q8IX30 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.15□□□□□ -1.75
SCUBE3Q8IX30 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.15□□□□□ -1.75
SCUBE3Q8IX30 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SCUBE3Q8IX30 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 SNORD74.4-201ENST00000364129 80 ntBASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 RNU6-438P-201ENST00000365561 103 ntBASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 MIR548D2-201ENST00000384955 97 ntBASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 MIR520G-201ENST00000385064 90 ntBASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 MIR1255A-201ENST00000408338 113 ntBASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 SNRPGP10-201ENST00000432323 225 ntBASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 AC083863.1-201ENST00000438811 231 ntBASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 AL133162.1-201ENST00000463228 453 ntBASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 RN7SKP209-201ENST00000516888 304 ntBASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 AC068657.1-201ENST00000520807 306 ntBASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 DEFB131E-201ENST00000532329 154 ntBASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 AL591424.2-201ENST00000617023 128 ntBASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 AC002076.2-201ENST00000617362 122 ntBASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 AL162726.3-218ENST00000636401 95 ntBASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.14□□□□□ -1.75
SCUBE3Q8IX30 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.13□□□□□ -1.75
SCUBE3Q8IX30 MAPK10-253ENST00000641010 4072 ntBASIC4.13□□□□□ -1.75
SCUBE3Q8IX30 RNU4-36P-201ENST00000364294 144 ntBASIC4.13□□□□□ -1.75
SCUBE3Q8IX30 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.13□□□□□ -1.75
SCUBE3Q8IX30 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.13□□□□□ -1.75
SCUBE3Q8IX30 AL500522.2-201ENST00000448562 343 ntBASIC4.13□□□□□ -1.75
SCUBE3Q8IX30 PPIAP15-201ENST00000479662 484 ntBASIC4.13□□□□□ -1.75
SCUBE3Q8IX30 AC006445.1-201ENST00000491925 405 ntBASIC4.13□□□□□ -1.75
SCUBE3Q8IX30 SCARNA23-201ENST00000516060 130 ntBASIC4.13□□□□□ -1.75
SCUBE3Q8IX30 SUMO2P16-201ENST00000519475 264 ntBASIC4.13□□□□□ -1.75
SCUBE3Q8IX30 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.13□□□□□ -1.75
SCUBE3Q8IX30 MIR5685-201ENST00000579080 79 ntBASIC4.13□□□□□ -1.75
SCUBE3Q8IX30 AC008507.4-201ENST00000585464 127 ntBASIC4.13□□□□□ -1.75
SCUBE3Q8IX30 AC021443.1-201ENST00000604478 211 ntBASIC4.13□□□□□ -1.75
SCUBE3Q8IX30 AC019176.2-201ENST00000611579 315 ntBASIC4.13□□□□□ -1.75
SCUBE3Q8IX30 MIR376A2-201ENST00000636782 80 ntBASIC4.13□□□□□ -1.75
SCUBE3Q8IX30 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.13□□□□□ -1.75
SCUBE3Q8IX30 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SCUBE3Q8IX30 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.13□□□□□ -1.75
SCUBE3Q8IX30 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCUBE3Q8IX30 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.12□□□□□ -1.75
SCUBE3Q8IX30 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCUBE3Q8IX30 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SCUBE3Q8IX30 Y_RNA.298-201ENST00000364960 107 ntBASIC4.12□□□□□ -1.75
SCUBE3Q8IX30 MIR491-201ENST00000384877 84 ntBASIC4.12□□□□□ -1.75
SCUBE3Q8IX30 MIR634-201ENST00000385208 97 ntBASIC4.12□□□□□ -1.75
SCUBE3Q8IX30 RPL39P25-201ENST00000449384 154 ntBASIC4.12□□□□□ -1.75
SCUBE3Q8IX30 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.12□□□□□ -1.75
SCUBE3Q8IX30 IGLL4P-201ENST00000614590 133 ntBASIC4.12□□□□□ -1.75
SCUBE3Q8IX30 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.12□□□□□ -1.75
SCUBE3Q8IX30 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SCUBE3Q8IX30 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.12□□□□□ -1.75
SCUBE3Q8IX30 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCUBE3Q8IX30 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCUBE3Q8IX30 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCUBE3Q8IX30 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCUBE3Q8IX30 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCUBE3Q8IX30 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SCUBE3Q8IX30 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCUBE3Q8IX30 RNU6-349P-201ENST00000362402 107 ntBASIC4.11□□□□□ -1.75
SCUBE3Q8IX30 RNU6-944P-201ENST00000364023 107 ntBASIC4.11□□□□□ -1.75
SCUBE3Q8IX30 MIR518F-201ENST00000384973 87 ntBASIC4.11□□□□□ -1.75
SCUBE3Q8IX30 U8.17-201ENST00000391292 132 ntBASIC4.11□□□□□ -1.75
SCUBE3Q8IX30 AC093578.1-201ENST00000415219 368 ntBASIC4.11□□□□□ -1.75
SCUBE3Q8IX30 SNRPGP5-201ENST00000456003 220 ntBASIC4.11□□□□□ -1.75
SCUBE3Q8IX30 HMGN2P16-201ENST00000456802 261 ntBASIC4.11□□□□□ -1.75
SCUBE3Q8IX30 RNU2-58P-201ENST00000516403 183 ntBASIC4.11□□□□□ -1.75
SCUBE3Q8IX30 RNU6-1231P-201ENST00000517185 103 ntBASIC4.11□□□□□ -1.75
SCUBE3Q8IX30 AC004486.1-201ENST00000546846 233 ntBASIC4.11□□□□□ -1.75
SCUBE3Q8IX30 FAM35DP-201ENST00000323387 2712 ntBASIC4.11□□□□□ -1.75
SCUBE3Q8IX30 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
SCUBE3Q8IX30 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.11□□□□□ -1.75
SCUBE3Q8IX30 MFSD8-236ENST00000641509 4050 ntBASIC4.11□□□□□ -1.75
SCUBE3Q8IX30 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 RNY3P2-201ENST00000362918 102 ntBASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 RNY1P1-201ENST00000364372 112 ntBASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 SNORA2.2-201ENST00000365473 135 ntBASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 Y_RNA.410-201ENST00000383992 113 ntBASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms