Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 RNU7-14P-201ENST00000459331 62 ntBASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 AC008413.1-201ENST00000511864 177 ntBASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 AC067942.3-201ENST00000512025 362 ntBASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 SNORA40.9-201ENST00000515895 93 ntBASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 Y_RNA.680-201ENST00000516441 93 ntBASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 RNU6-966P-201ENST00000516479 104 ntBASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 RNA5SP281-201ENST00000516504 135 ntBASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 RNU5F-4P-201ENST00000516581 114 ntBASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 SCARNA16.3-201ENST00000516595 184 ntBASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 AC022616.8-201ENST00000533569 253 ntBASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 AC026470.2-201ENST00000561492 181 ntBASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 AC009127.3-201ENST00000570531 403 ntBASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 MIR3671-201ENST00000580455 88 ntBASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 U4.1-201ENST00000620349 87 ntBASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 MIR8062-201ENST00000621515 85 ntBASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 uc_338.20-201ENST00000621563 178 ntBASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 CTSLP2-204ENST00000629029 392 ntBASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.84□□□□□ -2.11
LRRTM1Q86UE6 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
LRRTM1Q86UE6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.84□□□□□ -2.12
LRRTM1Q86UE6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 RNU1-62P-201ENST00000362599 164 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 RNU4-50P-201ENST00000364361 141 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 SNORA25B-201ENST00000365507 128 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 SNORA63.7-201ENST00000365579 123 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 RNU6-937P-201ENST00000384325 106 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 SNORD78.2-201ENST00000391076 69 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 AC009238.1-201ENST00000442165 424 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 AL731563.1-201ENST00000442202 214 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 AC009237.6-201ENST00000446969 424 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 HMGN2P18-201ENST00000450680 270 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 AC007395.1-201ENST00000451333 677 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 RPS23P5-201ENST00000495419 428 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 MTND1P19-201ENST00000511780 315 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 RNU6-991P-201ENST00000516168 107 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 Y_RNA.683-201ENST00000516508 93 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 RNU6-667P-201ENST00000517186 102 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 AC091144.1-201ENST00000519573 138 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 AC006006.1-201ENST00000603082 144 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 MIR6132-201ENST00000622083 109 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.83□□□□□ -2.12
LRRTM1Q86UE6 MIR340-201ENST00000362125 95 ntBASIC1.82□□□□□ -2.12
LRRTM1Q86UE6 snoU2_19.2-201ENST00000363024 80 ntBASIC1.82□□□□□ -2.12
LRRTM1Q86UE6 Y_RNA.111-201ENST00000363248 100 ntBASIC1.82□□□□□ -2.12
LRRTM1Q86UE6 RNU1-91P-201ENST00000364746 163 ntBASIC1.82□□□□□ -2.12
LRRTM1Q86UE6 U3.40-201ENST00000408706 208 ntBASIC1.82□□□□□ -2.12
LRRTM1Q86UE6 SDAD1P3-201ENST00000427380 333 ntBASIC1.82□□□□□ -2.12
LRRTM1Q86UE6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.82□□□□□ -2.12
LRRTM1Q86UE6 RNU6-408P-201ENST00000515910 100 ntBASIC1.82□□□□□ -2.12
LRRTM1Q86UE6 RNU6-344P-201ENST00000516635 111 ntBASIC1.82□□□□□ -2.12
LRRTM1Q86UE6 AP003733.2-201ENST00000529409 171 ntBASIC1.82□□□□□ -2.12
LRRTM1Q86UE6 AC110588.1-201ENST00000559699 137 ntBASIC1.82□□□□□ -2.12
LRRTM1Q86UE6 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.82□□□□□ -2.12
LRRTM1Q86UE6 ZNF658B-202ENST00000615961 3375 ntBASIC1.82□□□□□ -2.12
LRRTM1Q86UE6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LRRTM1Q86UE6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 RNU6-702P-201ENST00000364982 107 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 Y_RNA.307-201ENST00000365022 117 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 Y_RNA.461-201ENST00000384263 103 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 RNU6-611P-201ENST00000384276 104 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 RNU6-102P-201ENST00000384485 104 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 Y_RNA.510-201ENST00000384511 114 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 MIR548B-201ENST00000385247 97 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 Y_RNA.595-201ENST00000410403 105 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 RNU2-38P-201ENST00000410856 79 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 UQCRBP2-201ENST00000447827 297 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 HMGN2P9-201ENST00000476875 229 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 SNORA4.4-201ENST00000515921 135 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 Y_RNA.668-201ENST00000516233 93 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 SNORA40.15-201ENST00000516884 107 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 AC018448.1-201ENST00000552843 316 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 AC233702.2-202ENST00000562547 291 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 AC025754.2-201ENST00000606491 432 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 SNORD11B-201ENST00000607707 90 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 AC090425.1-201ENST00000610007 140 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 MIR6852-201ENST00000621699 66 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 AC130454.1-201ENST00000622948 401 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 AC068205.3-201ENST00000636385 468 ntBASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.81□□□□□ -2.12
LRRTM1Q86UE6 CENPCP1-201ENST00000533085 2578 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms