Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.32□□□□□ -1.88
RUFY4Q6ZNE9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.31□□□□□ -1.88
RUFY4Q6ZNE9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.31□□□□□ -1.88
RUFY4Q6ZNE9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
RUFY4Q6ZNE9 Y_RNA.150-201ENST00000363562 102 ntBASIC3.31□□□□□ -1.88
RUFY4Q6ZNE9 RNA5SP240-201ENST00000365355 128 ntBASIC3.31□□□□□ -1.88
RUFY4Q6ZNE9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.31□□□□□ -1.88
RUFY4Q6ZNE9 SUMO1P3-201ENST00000439961 304 ntBASIC3.31□□□□□ -1.88
RUFY4Q6ZNE9 RN7SL20P-201ENST00000488827 297 ntBASIC3.31□□□□□ -1.88
RUFY4Q6ZNE9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.31□□□□□ -1.88
RUFY4Q6ZNE9 RNA5SP356-201ENST00000515972 94 ntBASIC3.31□□□□□ -1.88
RUFY4Q6ZNE9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.31□□□□□ -1.88
RUFY4Q6ZNE9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.31□□□□□ -1.88
RUFY4Q6ZNE9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.31□□□□□ -1.88
RUFY4Q6ZNE9 AC092435.3-201ENST00000565538 3654 ntBASIC3.31□□□□□ -1.88
RUFY4Q6ZNE9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RUFY4Q6ZNE9 AC108206.1-201ENST00000570186 4159 ntBASIC3.31□□□□□ -1.88
RUFY4Q6ZNE9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.3□□□□□ -1.88
RUFY4Q6ZNE9 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.3□□□□□ -1.88
RUFY4Q6ZNE9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.3□□□□□ -1.88
RUFY4Q6ZNE9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.3□□□□□ -1.88
RUFY4Q6ZNE9 AC107393.1-201ENST00000512403 346 ntBASIC3.3□□□□□ -1.88
RUFY4Q6ZNE9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RUFY4Q6ZNE9 MIR3616-201ENST00000584070 92 ntBASIC3.3□□□□□ -1.88
RUFY4Q6ZNE9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.3□□□□□ -1.88
RUFY4Q6ZNE9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RUFY4Q6ZNE9 AC080128.1-201ENST00000474389 1917 ntBASIC3.3□□□□□ -1.88
RUFY4Q6ZNE9 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.3□□□□□ -1.88
RUFY4Q6ZNE9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 RNU6-545P-201ENST00000362681 104 ntBASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 Y_RNA.368-201ENST00000365547 113 ntBASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 RNU6-975P-201ENST00000384296 105 ntBASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 MIR218-1-201ENST00000384999 110 ntBASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 PCNPP3-201ENST00000393579 471 ntBASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 RNA5SP344-201ENST00000411081 104 ntBASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 OOSP1P1-201ENST00000423265 274 ntBASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 AL161788.1-201ENST00000441805 169 ntBASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 RNU7-57P-201ENST00000459540 60 ntBASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 SCGB1D5P-201ENST00000515134 247 ntBASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 MIR3162-201ENST00000581818 82 ntBASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 AC104984.5-201ENST00000586878 94 ntBASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 AL356280.1-201ENST00000603614 379 ntBASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 snoZ196.1-201ENST00000625269 89 ntBASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
RUFY4Q6ZNE9 MIR449A-201ENST00000362113 91 ntBASIC3.28□□□□□ -1.88
RUFY4Q6ZNE9 RNA5SP126-201ENST00000365092 109 ntBASIC3.28□□□□□ -1.88
RUFY4Q6ZNE9 Y_RNA.456-201ENST00000384232 111 ntBASIC3.28□□□□□ -1.88
RUFY4Q6ZNE9 RNU6-918P-201ENST00000391219 106 ntBASIC3.28□□□□□ -1.88
RUFY4Q6ZNE9 FO393413.1-201ENST00000402892 195 ntBASIC3.28□□□□□ -1.88
RUFY4Q6ZNE9 BTF3P11-201ENST00000426582 477 ntBASIC3.28□□□□□ -1.88
RUFY4Q6ZNE9 AC016925.1-201ENST00000458303 298 ntBASIC3.28□□□□□ -1.88
RUFY4Q6ZNE9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.28□□□□□ -1.88
RUFY4Q6ZNE9 RNU6-948P-201ENST00000516374 107 ntBASIC3.28□□□□□ -1.88
RUFY4Q6ZNE9 RNU2-34P-201ENST00000516534 121 ntBASIC3.28□□□□□ -1.88
RUFY4Q6ZNE9 RNA5SP367-201ENST00000516557 118 ntBASIC3.28□□□□□ -1.88
RUFY4Q6ZNE9 RNU6-1212P-201ENST00000517023 104 ntBASIC3.28□□□□□ -1.88
RUFY4Q6ZNE9 AC022616.8-201ENST00000533569 253 ntBASIC3.28□□□□□ -1.88
RUFY4Q6ZNE9 AL008718.3-201ENST00000610217 321 ntBASIC3.28□□□□□ -1.88
RUFY4Q6ZNE9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.28□□□□□ -1.88
RUFY4Q6ZNE9 AL365265.1-201ENST00000621045 234 ntBASIC3.28□□□□□ -1.88
RUFY4Q6ZNE9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RUFY4Q6ZNE9 U6.106-201ENST00000636360 105 ntBASIC3.28□□□□□ -1.88
RUFY4Q6ZNE9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RUFY4Q6ZNE9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.27□□□□□ -1.89
RUFY4Q6ZNE9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.27□□□□□ -1.89
RUFY4Q6ZNE9 RNU6-682P-201ENST00000363843 106 ntBASIC3.27□□□□□ -1.89
RUFY4Q6ZNE9 RNU6-546P-201ENST00000383991 107 ntBASIC3.27□□□□□ -1.89
RUFY4Q6ZNE9 Y_RNA.637-201ENST00000459424 114 ntBASIC3.27□□□□□ -1.89
RUFY4Q6ZNE9 RNU6-221P-201ENST00000459541 99 ntBASIC3.27□□□□□ -1.89
RUFY4Q6ZNE9 AC023141.11-201ENST00000508864 202 ntBASIC3.27□□□□□ -1.89
RUFY4Q6ZNE9 MIR449C-201ENST00000516047 92 ntBASIC3.27□□□□□ -1.89
RUFY4Q6ZNE9 SNORA48.11-201ENST00000517015 89 ntBASIC3.27□□□□□ -1.89
RUFY4Q6ZNE9 AL137100.2-201ENST00000555786 315 ntBASIC3.27□□□□□ -1.89
RUFY4Q6ZNE9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RUFY4Q6ZNE9 RNU6-653P-201ENST00000363074 106 ntBASIC3.26□□□□□ -1.89
RUFY4Q6ZNE9 Y_RNA.233-201ENST00000364407 101 ntBASIC3.26□□□□□ -1.89
RUFY4Q6ZNE9 RNU6-47P-201ENST00000383866 107 ntBASIC3.26□□□□□ -1.89
RUFY4Q6ZNE9 SNORD21-201ENST00000383953 95 ntBASIC3.26□□□□□ -1.89
RUFY4Q6ZNE9 AL139095.1-201ENST00000404326 391 ntBASIC3.26□□□□□ -1.89
RUFY4Q6ZNE9 AL357139.1-201ENST00000407792 426 ntBASIC3.26□□□□□ -1.89
RUFY4Q6ZNE9 MIR548M-201ENST00000408260 86 ntBASIC3.26□□□□□ -1.89
RUFY4Q6ZNE9 RNU2-63P-201ENST00000410792 194 ntBASIC3.26□□□□□ -1.89
RUFY4Q6ZNE9 COX6CP10-201ENST00000416832 224 ntBASIC3.26□□□□□ -1.89
RUFY4Q6ZNE9 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.26□□□□□ -1.89
RUFY4Q6ZNE9 EEF1B2P7-201ENST00000451177 676 ntBASIC3.26□□□□□ -1.89
RUFY4Q6ZNE9 AC108938.1-201ENST00000451204 136 ntBASIC3.26□□□□□ -1.89
RUFY4Q6ZNE9 AC107016.2-201ENST00000547968 190 ntBASIC3.26□□□□□ -1.89
RUFY4Q6ZNE9 AC013412.1-201ENST00000610687 192 ntBASIC3.26□□□□□ -1.89
RUFY4Q6ZNE9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.26□□□□□ -1.89
RUFY4Q6ZNE9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RUFY4Q6ZNE9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
RUFY4Q6ZNE9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.25□□□□□ -1.89
RUFY4Q6ZNE9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
RUFY4Q6ZNE9 RNU6-271P-201ENST00000363858 105 ntBASIC3.25□□□□□ -1.89
RUFY4Q6ZNE9 RNU6-801P-201ENST00000364087 105 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 218.2 ms