Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 RNU6-566P-201ENST00000516790 107 ntBASIC1.28□□□□□ -2.2
ATL3Q6DD88 RNA5SP454-201ENST00000517231 127 ntBASIC1.28□□□□□ -2.2
ATL3Q6DD88 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.28□□□□□ -2.2
ATL3Q6DD88 AC005668.1-201ENST00000571142 476 ntBASIC1.28□□□□□ -2.2
ATL3Q6DD88 AL353770.2-201ENST00000620024 78 ntBASIC1.28□□□□□ -2.2
ATL3Q6DD88 MIR8063-201ENST00000621930 81 ntBASIC1.28□□□□□ -2.2
ATL3Q6DD88 MTND4P12-201ENST00000498999 1377 ntBASIC1.28□□□□□ -2.2
ATL3Q6DD88 MTND5P35-201ENST00000557537 1720 ntBASIC1.28□□□□□ -2.2
ATL3Q6DD88 Y_RNA.224-201ENST00000364308 111 ntBASIC1.27□□□□□ -2.21
ATL3Q6DD88 Y_RNA.319-201ENST00000365138 92 ntBASIC1.27□□□□□ -2.21
ATL3Q6DD88 SNORA4.2-201ENST00000365313 147 ntBASIC1.27□□□□□ -2.21
ATL3Q6DD88 RNU6-1065P-201ENST00000384513 106 ntBASIC1.27□□□□□ -2.21
ATL3Q6DD88 RNU6-417P-201ENST00000384712 107 ntBASIC1.27□□□□□ -2.21
ATL3Q6DD88 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.27□□□□□ -2.21
ATL3Q6DD88 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
ATL3Q6DD88 RNU6-57P-201ENST00000411348 103 ntBASIC1.27□□□□□ -2.21
ATL3Q6DD88 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.27□□□□□ -2.21
ATL3Q6DD88 SNORA25.14-201ENST00000516481 132 ntBASIC1.27□□□□□ -2.21
ATL3Q6DD88 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.27□□□□□ -2.21
ATL3Q6DD88 AC015688.6-201ENST00000577737 104 ntBASIC1.27□□□□□ -2.21
ATL3Q6DD88 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.27□□□□□ -2.21
ATL3Q6DD88 AC012557.2-201ENST00000605919 418 ntBASIC1.27□□□□□ -2.21
ATL3Q6DD88 SNORD11B-201ENST00000607707 90 ntBASIC1.27□□□□□ -2.21
ATL3Q6DD88 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.27□□□□□ -2.21
ATL3Q6DD88 AL078596.1-201ENST00000624856 447 ntBASIC1.27□□□□□ -2.21
ATL3Q6DD88 AC100810.6-201ENST00000638068 285 ntBASIC1.27□□□□□ -2.21
ATL3Q6DD88 RNU6-595P-201ENST00000363944 107 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 SNORA25.8-201ENST00000364831 128 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 RNU6-842P-201ENST00000384269 107 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 RNU6-306P-201ENST00000384617 107 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 Y_RNA.573-201ENST00000384763 105 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 MIR1185-2-201ENST00000408687 86 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.26□□□□□ -2.21
ATL3Q6DD88 AP1B1P2-201ENST00000416196 106 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 BTF3P4-201ENST00000418852 495 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 EIF1P1-201ENST00000421436 341 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.26□□□□□ -2.21
ATL3Q6DD88 MTATP6P13-201ENST00000438531 667 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 AC074290.1-201ENST00000448883 135 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 RPS27P1-201ENST00000450552 247 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.26□□□□□ -2.21
ATL3Q6DD88 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.26□□□□□ -2.21
ATL3Q6DD88 SNORD5.1-201ENST00000458800 75 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 RPL30P7-201ENST00000479312 323 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 AL163195.1-201ENST00000496941 348 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 AC011352.1-201ENST00000512300 793 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 RNU6-1146P-201ENST00000516282 102 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.26□□□□□ -2.21
ATL3Q6DD88 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.26□□□□□ -2.21
ATL3Q6DD88 AL078603.1-201ENST00000603824 313 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 AL359821.1-201ENST00000605519 182 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 AL355802.3-201ENST00000607571 545 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 MIR7111-201ENST00000619751 72 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.26□□□□□ -2.21
ATL3Q6DD88 AC006001.4-201ENST00000622243 395 ntBASIC1.26□□□□□ -2.21
ATL3Q6DD88 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
ATL3Q6DD88 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
ATL3Q6DD88 U3.8-201ENST00000363675 217 ntBASIC1.25□□□□□ -2.21
ATL3Q6DD88 RNU6-873P-201ENST00000363833 107 ntBASIC1.25□□□□□ -2.21
ATL3Q6DD88 SNORD87-201ENST00000364849 89 ntBASIC1.25□□□□□ -2.21
ATL3Q6DD88 RNU6-1240P-201ENST00000365155 104 ntBASIC1.25□□□□□ -2.21
ATL3Q6DD88 Y_RNA.453-201ENST00000384223 109 ntBASIC1.25□□□□□ -2.21
ATL3Q6DD88 RNU6-1215P-201ENST00000384441 102 ntBASIC1.25□□□□□ -2.21
ATL3Q6DD88 Y_RNA.533-201ENST00000384596 114 ntBASIC1.25□□□□□ -2.21
ATL3Q6DD88 SNORD115-47-201ENST00000391226 86 ntBASIC1.25□□□□□ -2.21
ATL3Q6DD88 MIR548F1-201ENST00000408667 84 ntBASIC1.25□□□□□ -2.21
ATL3Q6DD88 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.25□□□□□ -2.21
ATL3Q6DD88 USP9YP30-201ENST00000430729 455 ntBASIC1.25□□□□□ -2.21
ATL3Q6DD88 snoU13.27-201ENST00000459278 104 ntBASIC1.25□□□□□ -2.21
ATL3Q6DD88 AC024995.1-201ENST00000523014 93 ntBASIC1.25□□□□□ -2.21
ATL3Q6DD88 AL442163.3-201ENST00000554110 156 ntBASIC1.25□□□□□ -2.21
ATL3Q6DD88 UBL5P4-201ENST00000562584 236 ntBASIC1.25□□□□□ -2.21
ATL3Q6DD88 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.25□□□□□ -2.21
ATL3Q6DD88 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.25□□□□□ -2.21
ATL3Q6DD88 MIR3662-201ENST00000637030 95 ntBASIC1.25□□□□□ -2.21
ATL3Q6DD88 AL391987.6-201ENST00000305671 199 ntBASIC1.24□□□□□ -2.21
ATL3Q6DD88 MIR10B-201ENST00000385011 110 ntBASIC1.24□□□□□ -2.21
ATL3Q6DD88 MIR518E-201ENST00000385252 88 ntBASIC1.24□□□□□ -2.21
ATL3Q6DD88 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
ATL3Q6DD88 RNU1-117P-201ENST00000517041 158 ntBASIC1.24□□□□□ -2.21
ATL3Q6DD88 AC019288.1-201ENST00000557918 224 ntBASIC1.24□□□□□ -2.21
ATL3Q6DD88 RNU6-1059P-201ENST00000363752 98 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 Y_RNA.405-201ENST00000383979 100 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 Y_RNA.451-201ENST00000384200 100 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 Y_RNA.524-201ENST00000384564 100 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 Y_RNA.561-201ENST00000384694 100 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 MIR513A1-201ENST00000385138 129 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 RNU6-321P-201ENST00000410912 106 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 AC004965.1-201ENST00000413033 213 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 COX6CP10-201ENST00000416832 224 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 RPL30P16-201ENST00000419341 429 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.23□□□□□ -2.21
ATL3Q6DD88 RPS27P16-201ENST00000425758 201 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 AL445305.1-201ENST00000432577 575 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 AL606517.2-201ENST00000442855 241 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.23□□□□□ -2.21
ATL3Q6DD88 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.23□□□□□ -2.21
ATL3Q6DD88 snoU13.18-201ENST00000459483 104 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 RNU6-329P-201ENST00000459618 107 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 AC091179.3-201ENST00000474761 144 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms