Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.93□□□□□ -2.1
LRIF1Q5T3J3 RNU6-1310P-201ENST00000384153 107 ntBASIC1.93□□□□□ -2.1
LRIF1Q5T3J3 MIR17-201ENST00000385012 84 ntBASIC1.93□□□□□ -2.1
LRIF1Q5T3J3 RNA5SP212-201ENST00000391223 107 ntBASIC1.93□□□□□ -2.1
LRIF1Q5T3J3 MRPL35P1-201ENST00000404272 572 ntBASIC1.93□□□□□ -2.1
LRIF1Q5T3J3 SNORA11.4-201ENST00000408823 129 ntBASIC1.93□□□□□ -2.1
LRIF1Q5T3J3 AC096644.2-201ENST00000429278 159 ntBASIC1.93□□□□□ -2.1
LRIF1Q5T3J3 AL160004.2-201ENST00000432935 350 ntBASIC1.93□□□□□ -2.1
LRIF1Q5T3J3 RNU6-625P-201ENST00000459412 107 ntBASIC1.93□□□□□ -2.1
LRIF1Q5T3J3 Y_RNA.631-201ENST00000459607 101 ntBASIC1.93□□□□□ -2.1
LRIF1Q5T3J3 AC093852.1-201ENST00000503587 266 ntBASIC1.93□□□□□ -2.1
LRIF1Q5T3J3 MIR514B-201ENST00000516774 80 ntBASIC1.93□□□□□ -2.1
LRIF1Q5T3J3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LRIF1Q5T3J3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.93□□□□□ -2.1
LRIF1Q5T3J3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.93□□□□□ -2.1
LRIF1Q5T3J3 MIR3935-201ENST00000583472 104 ntBASIC1.93□□□□□ -2.1
LRIF1Q5T3J3 AC006157.1-201ENST00000611750 366 ntBASIC1.93□□□□□ -2.1
LRIF1Q5T3J3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
LRIF1Q5T3J3 RNU6-1266P-201ENST00000362794 105 ntBASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 snoU2-30.2-201ENST00000362805 70 ntBASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 MIR515-2-201ENST00000384883 83 ntBASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 MIR515-1-201ENST00000384884 83 ntBASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 AL117342.1-201ENST00000404861 406 ntBASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 AL139156.1-201ENST00000412785 841 ntBASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 AC016909.1-201ENST00000415916 166 ntBASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 CST2P1-201ENST00000425770 87 ntBASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 SDAD1P3-201ENST00000427380 333 ntBASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 YWHAEP4-201ENST00000505390 198 ntBASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 RNU6-1041P-201ENST00000516254 102 ntBASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 MIR5188-201ENST00000583467 113 ntBASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 AL109918.3-201ENST00000603072 338 ntBASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 AC005034.5-201ENST00000604219 466 ntBASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 AL162373.1-201ENST00000620433 407 ntBASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 AC006001.4-201ENST00000622243 395 ntBASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 MIR338-201ENST00000636369 67 ntBASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 CENPCP1-201ENST00000533085 2578 ntBASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
LRIF1Q5T3J3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LRIF1Q5T3J3 Y_RNA.813-201ENST00000364639 102 ntBASIC1.91□□□□□ -2.1
LRIF1Q5T3J3 MIR1302-11-201ENST00000408051 138 ntBASIC1.91□□□□□ -2.1
LRIF1Q5T3J3 MIR1253-201ENST00000408273 105 ntBASIC1.91□□□□□ -2.1
LRIF1Q5T3J3 MIR1302-9-201ENST00000408365 138 ntBASIC1.91□□□□□ -2.1
LRIF1Q5T3J3 MIR1302-10-201ENST00000408734 138 ntBASIC1.91□□□□□ -2.1
LRIF1Q5T3J3 MCFD2P1-201ENST00000417812 300 ntBASIC1.91□□□□□ -2.1
LRIF1Q5T3J3 RAB28P5-201ENST00000427490 651 ntBASIC1.91□□□□□ -2.1
LRIF1Q5T3J3 MTND4P19-201ENST00000446659 478 ntBASIC1.91□□□□□ -2.1
LRIF1Q5T3J3 SNORA25.10-201ENST00000515926 124 ntBASIC1.91□□□□□ -2.1
LRIF1Q5T3J3 RN7SKP295-201ENST00000517264 153 ntBASIC1.91□□□□□ -2.1
LRIF1Q5T3J3 IGKV3-31-201ENST00000523109 329 ntBASIC1.91□□□□□ -2.1
LRIF1Q5T3J3 MIR1302-2-201ENST00000607096 138 ntBASIC1.91□□□□□ -2.1
LRIF1Q5T3J3 SNORD58B-201ENST00000607313 66 ntBASIC1.91□□□□□ -2.1
LRIF1Q5T3J3 MIR6873-201ENST00000622788 63 ntBASIC1.91□□□□□ -2.1
LRIF1Q5T3J3 AC006435.5-201ENST00000624486 112 ntBASIC1.91□□□□□ -2.1
LRIF1Q5T3J3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.91□□□□□ -2.1
LRIF1Q5T3J3 MIR3674-201ENST00000636576 68 ntBASIC1.91□□□□□ -2.1
LRIF1Q5T3J3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
LRIF1Q5T3J3 Y_RNA.28-201ENST00000362554 111 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 RNU6-862P-201ENST00000362804 105 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 RNU4-76P-201ENST00000364509 141 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 RNU6-474P-201ENST00000384243 107 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 SNORA8-201ENST00000384574 139 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 SUMO2P12-201ENST00000405924 140 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 RNA5SP475-201ENST00000410568 110 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 RNU4-53P-201ENST00000410828 140 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 AL135786.1-201ENST00000415892 214 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 PMCHL1-202ENST00000423102 261 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 MTCO2P12-201ENST00000427426 682 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 AC112492.4-201ENST00000456549 352 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 RNA5SP233-201ENST00000459153 113 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 RPL26P26-201ENST00000480251 434 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 RNVU1-2-201ENST00000516326 135 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 SUB1P4-201ENST00000566062 339 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 MIR4287-201ENST00000579398 78 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 AC022432.1-201ENST00000595739 310 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 RPS29P30-201ENST00000600975 111 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 AL773524.1-201ENST00000614065 229 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 AC010205.1-201ENST00000616668 449 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 SDR42E1P4-201ENST00000620894 481 ntBASIC1.9□□□□□ -2.11
LRIF1Q5T3J3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
LRIF1Q5T3J3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
LRIF1Q5T3J3 RNA5SP276-201ENST00000362580 94 ntBASIC1.89□□□□□ -2.11
LRIF1Q5T3J3 RNU1-96P-201ENST00000364163 162 ntBASIC1.89□□□□□ -2.11
LRIF1Q5T3J3 SNORA72.2-201ENST00000365028 127 ntBASIC1.89□□□□□ -2.11
LRIF1Q5T3J3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.89□□□□□ -2.11
LRIF1Q5T3J3 AL356320.1-201ENST00000429616 163 ntBASIC1.89□□□□□ -2.11
LRIF1Q5T3J3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.89□□□□□ -2.11
LRIF1Q5T3J3 AC099677.2-201ENST00000436385 175 ntBASIC1.89□□□□□ -2.11
LRIF1Q5T3J3 HMGN2P34-201ENST00000437647 269 ntBASIC1.89□□□□□ -2.11
LRIF1Q5T3J3 SUMO1P2-201ENST00000452524 304 ntBASIC1.89□□□□□ -2.11
LRIF1Q5T3J3 RNU6-408P-201ENST00000515910 100 ntBASIC1.89□□□□□ -2.11
LRIF1Q5T3J3 RNU6-988P-201ENST00000519081 107 ntBASIC1.89□□□□□ -2.11
LRIF1Q5T3J3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.89□□□□□ -2.11
LRIF1Q5T3J3 HSBP1P1-201ENST00000555205 166 ntBASIC1.89□□□□□ -2.11
LRIF1Q5T3J3 MIR5089-201ENST00000580047 84 ntBASIC1.89□□□□□ -2.11
LRIF1Q5T3J3 MIR4659A-201ENST00000580269 81 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms