Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC025627.2-201ENST00000576220 160 ntBASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 MIR3117-201ENST00000584034 78 ntBASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 AC096577.2-201ENST00000611455 153 ntBASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 MIR7154-201ENST00000620673 73 ntBASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RNFT1Q5M7Z0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RNFT1Q5M7Z0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.65□□□□□ -1.82
RNFT1Q5M7Z0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RNFT1Q5M7Z0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RNFT1Q5M7Z0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.65□□□□□ -1.82
RNFT1Q5M7Z0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
RNFT1Q5M7Z0 SNORA60-201ENST00000362396 134 ntBASIC3.65□□□□□ -1.83
RNFT1Q5M7Z0 SNORA62.3-201ENST00000365110 153 ntBASIC3.65□□□□□ -1.83
RNFT1Q5M7Z0 Y_RNA.454-201ENST00000384224 113 ntBASIC3.65□□□□□ -1.83
RNFT1Q5M7Z0 Y_RNA.531-201ENST00000384589 121 ntBASIC3.65□□□□□ -1.83
RNFT1Q5M7Z0 MIR670-201ENST00000390142 98 ntBASIC3.65□□□□□ -1.83
RNFT1Q5M7Z0 SNORA71B-202ENST00000439232 272 ntBASIC3.65□□□□□ -1.83
RNFT1Q5M7Z0 AC009238.1-201ENST00000442165 424 ntBASIC3.65□□□□□ -1.83
RNFT1Q5M7Z0 AC009237.6-201ENST00000446969 424 ntBASIC3.65□□□□□ -1.83
RNFT1Q5M7Z0 RPL29P14-201ENST00000495837 428 ntBASIC3.65□□□□□ -1.83
RNFT1Q5M7Z0 SNORA70.14-201ENST00000516205 110 ntBASIC3.65□□□□□ -1.83
RNFT1Q5M7Z0 AC008507.4-201ENST00000585464 127 ntBASIC3.65□□□□□ -1.83
RNFT1Q5M7Z0 RNU1-30P-201ENST00000606575 163 ntBASIC3.65□□□□□ -1.83
RNFT1Q5M7Z0 MIR4727-201ENST00000622232 55 ntBASIC3.65□□□□□ -1.83
RNFT1Q5M7Z0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.65□□□□□ -1.83
RNFT1Q5M7Z0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RNFT1Q5M7Z0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RNFT1Q5M7Z0 Z82217.1-201ENST00000625157 8149 ntBASIC3.65□□□□□ -1.83
RNFT1Q5M7Z0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 RNA5SP124-201ENST00000362739 110 ntBASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 RNU1-72P-201ENST00000362976 153 ntBASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 SNORD35B-201ENST00000363660 87 ntBASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 RNU6-60P-201ENST00000364792 103 ntBASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 SNORA2.2-201ENST00000365473 135 ntBASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 MIR577-201ENST00000385196 96 ntBASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 Y_RNA.620-201ENST00000411009 88 ntBASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 RNU7-14P-201ENST00000459331 62 ntBASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 AC113410.1-201ENST00000505029 247 ntBASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 IGLV3-26-201ENST00000520756 302 ntBASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 AC100770.1-201ENST00000532310 322 ntBASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 HIGD1AP1-201ENST00000550979 275 ntBASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 MIR3683-201ENST00000580847 82 ntBASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 HMGN2P15-201ENST00000585707 270 ntBASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 AC073308.1-201ENST00000623696 305 ntBASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 AC012442.3-202ENST00000636742 206 ntBASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.64□□□□□ -1.83
RNFT1Q5M7Z0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 Y_RNA.190-201ENST00000363964 101 ntBASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 PTMAP2-201ENST00000397627 327 ntBASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 AP000567.1-201ENST00000406413 156 ntBASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 RNU6ATAC-201ENST00000408749 126 ntBASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 RPL32P35-201ENST00000415214 394 ntBASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 AL513477.1-202ENST00000417061 214 ntBASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 GOT2P5-201ENST00000433995 546 ntBASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 RPS26P28-201ENST00000470806 348 ntBASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 HMGN1P7-201ENST00000491722 313 ntBASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 RPS29P21-201ENST00000496272 170 ntBASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 RNU6-948P-201ENST00000516374 107 ntBASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 RNU7-6P-201ENST00000516845 62 ntBASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 RNA5SP143-201ENST00000516936 115 ntBASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 RNU7-172P-201ENST00000517125 64 ntBASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 MIR4305-201ENST00000583252 102 ntBASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 AL121772.2-201ENST00000614331 297 ntBASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 CR392039.5-201ENST00000623201 510 ntBASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 AC006160.2-201ENST00000637708 154 ntBASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNFT1Q5M7Z0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 RNA5SP295-201ENST00000362655 121 ntBASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 Y_RNA.360-201ENST00000365512 102 ntBASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 MIR30B-201ENST00000384850 88 ntBASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 MIR147B-201ENST00000390185 80 ntBASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 AC023141.4-201ENST00000412031 328 ntBASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 AC016717.1-201ENST00000448918 286 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms