Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NCBP3Q53F19 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
NCBP3Q53F19 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
NCBP3Q53F19 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
NCBP3Q53F19 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
NCBP3Q53F19 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.16□□□□□ -1.42
NCBP3Q53F19 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
NCBP3Q53F19 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NCBP3Q53F19 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NCBP3Q53F19 RNA5SP139-201ENST00000364340 117 ntBASIC6.16□□□□□ -1.42
NCBP3Q53F19 RNU6-1163P-201ENST00000364516 107 ntBASIC6.16□□□□□ -1.42
NCBP3Q53F19 Y_RNA.545-201ENST00000384652 105 ntBASIC6.16□□□□□ -1.42
NCBP3Q53F19 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC6.16□□□□□ -1.42
NCBP3Q53F19 RN7SL303P-201ENST00000469773 251 ntBASIC6.16□□□□□ -1.42
NCBP3Q53F19 RN7SL860P-201ENST00000473738 223 ntBASIC6.16□□□□□ -1.42
NCBP3Q53F19 RN7SKP46-201ENST00000515942 234 ntBASIC6.16□□□□□ -1.42
NCBP3Q53F19 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC6.16□□□□□ -1.42
NCBP3Q53F19 MIR6780A-201ENST00000615089 68 ntBASIC6.16□□□□□ -1.42
NCBP3Q53F19 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC6.16□□□□□ -1.42
NCBP3Q53F19 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC6.15□□□□□ -1.42
NCBP3Q53F19 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NCBP3Q53F19 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC6.15□□□□□ -1.42
NCBP3Q53F19 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC6.15□□□□□ -1.42
NCBP3Q53F19 SNORD115-34-201ENST00000362441 82 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 SNORD115-12-201ENST00000362583 82 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 SNORD115-29-201ENST00000362834 82 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 SNORD115-9-201ENST00000362912 82 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 SNORD115-21-201ENST00000362963 81 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 SNORD115-14-201ENST00000363090 81 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 RNU1-23P-201ENST00000363361 144 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 SNORD115-41-201ENST00000363608 82 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 SNORD115-11-201ENST00000363616 82 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 SNORD115-5-201ENST00000363633 82 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 SNORD115-39-201ENST00000363694 82 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 SNORD115-4-201ENST00000363810 82 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 SNORD115-6-201ENST00000363942 82 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 SNORD115-42-201ENST00000364273 82 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 SNORD115-15-201ENST00000364809 81 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 SNORD115-26-201ENST00000365067 82 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 SNORD115-10-201ENST00000365073 81 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 SNORD115-43-201ENST00000365503 82 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 SNORD115-36-201ENST00000365629 82 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 SNORA56-201ENST00000383966 129 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 RNA5SP482-201ENST00000391269 118 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 CKS1BP2-201ENST00000497342 240 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 U7.4-201ENST00000614961 63 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 AP005019.3-201ENST00000620418 560 ntBASIC6.15□□□□□ -1.42
NCBP3Q53F19 MFSD8-216ENST00000641147 4009 ntBASIC6.15□□□□□ -1.43
NCBP3Q53F19 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
NCBP3Q53F19 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NCBP3Q53F19 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NCBP3Q53F19 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NCBP3Q53F19 Z83843.1-201ENST00000604070 3685 ntBASIC6.14□□□□□ -1.43
NCBP3Q53F19 RNA5SP479-201ENST00000364858 117 ntBASIC6.14□□□□□ -1.43
NCBP3Q53F19 RNU6-1319P-201ENST00000390855 104 ntBASIC6.14□□□□□ -1.43
NCBP3Q53F19 RNU6-747P-201ENST00000390928 104 ntBASIC6.14□□□□□ -1.43
NCBP3Q53F19 RNU6-241P-201ENST00000391148 104 ntBASIC6.14□□□□□ -1.43
NCBP3Q53F19 RNU6-177P-201ENST00000411257 104 ntBASIC6.14□□□□□ -1.43
NCBP3Q53F19 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC6.14□□□□□ -1.43
NCBP3Q53F19 AC093729.1-201ENST00000513074 128 ntBASIC6.14□□□□□ -1.43
NCBP3Q53F19 MIR3152-201ENST00000579801 74 ntBASIC6.14□□□□□ -1.43
NCBP3Q53F19 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC6.14□□□□□ -1.43
NCBP3Q53F19 AC103810.6-201ENST00000606708 136 ntBASIC6.14□□□□□ -1.43
NCBP3Q53F19 MIR6853-201ENST00000619642 74 ntBASIC6.14□□□□□ -1.43
NCBP3Q53F19 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC6.14□□□□□ -1.43
NCBP3Q53F19 MFSD8-233ENST00000641482 4860 ntBASIC6.14□□□□□ -1.43
NCBP3Q53F19 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
NCBP3Q53F19 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
NCBP3Q53F19 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
NCBP3Q53F19 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NCBP3Q53F19 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC6.13□□□□□ -1.43
NCBP3Q53F19 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NCBP3Q53F19 SNORA22.1-201ENST00000362701 134 ntBASIC6.13□□□□□ -1.43
NCBP3Q53F19 SNORA32-201ENST00000384072 121 ntBASIC6.13□□□□□ -1.43
NCBP3Q53F19 RNA5SP397-201ENST00000391323 118 ntBASIC6.13□□□□□ -1.43
NCBP3Q53F19 NDUFB4P4-201ENST00000404822 243 ntBASIC6.13□□□□□ -1.43
NCBP3Q53F19 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC6.13□□□□□ -1.43
NCBP3Q53F19 RNA5SP103-201ENST00000459503 118 ntBASIC6.13□□□□□ -1.43
NCBP3Q53F19 AC108751.2-201ENST00000469993 231 ntBASIC6.13□□□□□ -1.43
NCBP3Q53F19 RN7SL504P-201ENST00000494496 287 ntBASIC6.13□□□□□ -1.43
NCBP3Q53F19 ATP6V1G1P6-201ENST00000504007 334 ntBASIC6.13□□□□□ -1.43
NCBP3Q53F19 AC114811.1-201ENST00000507207 168 ntBASIC6.13□□□□□ -1.43
NCBP3Q53F19 UBL5P1-201ENST00000507979 193 ntBASIC6.13□□□□□ -1.43
NCBP3Q53F19 IGHVIII-5-1-201ENST00000523059 99 ntBASIC6.13□□□□□ -1.43
NCBP3Q53F19 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
NCBP3Q53F19 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NCBP3Q53F19 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
NCBP3Q53F19 SNORA70F-201ENST00000384142 135 ntBASIC6.12□□□□□ -1.43
NCBP3Q53F19 RNU1-82P-201ENST00000390851 165 ntBASIC6.12□□□□□ -1.43
NCBP3Q53F19 AC006463.2-201ENST00000473326 348 ntBASIC6.12□□□□□ -1.43
NCBP3Q53F19 UBL5P3-201ENST00000475112 231 ntBASIC6.12□□□□□ -1.43
NCBP3Q53F19 AC114801.3-201ENST00000510231 177 ntBASIC6.12□□□□□ -1.43
NCBP3Q53F19 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC6.12□□□□□ -1.43
NCBP3Q53F19 MIR5739-201ENST00000619803 80 ntBASIC6.12□□□□□ -1.43
NCBP3Q53F19 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC6.12□□□□□ -1.43
NCBP3Q53F19 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NCBP3Q53F19 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NCBP3Q53F19 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NCBP3Q53F19 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NCBP3Q53F19 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms