Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.26□□□□□ -2.05
CCDC38Q502W7 AC006600.1-201ENST00000572529 153 ntBASIC2.26□□□□□ -2.05
CCDC38Q502W7 AL590808.1-201ENST00000618696 141 ntBASIC2.26□□□□□ -2.05
CCDC38Q502W7 uc_338.22-201ENST00000622722 187 ntBASIC2.26□□□□□ -2.05
CCDC38Q502W7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.26□□□□□ -2.05
CCDC38Q502W7 AC006026.1-201ENST00000444025 1803 ntBASIC2.26□□□□□ -2.05
CCDC38Q502W7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC38Q502W7 AC131280.1-202ENST00000624067 4211 ntBASIC2.25□□□□□ -2.05
CCDC38Q502W7 MIR369-201ENST00000362155 70 ntBASIC2.25□□□□□ -2.05
CCDC38Q502W7 SNORA8-201ENST00000384574 139 ntBASIC2.25□□□□□ -2.05
CCDC38Q502W7 MIR221-201ENST00000385135 110 ntBASIC2.25□□□□□ -2.05
CCDC38Q502W7 RNA5SP212-201ENST00000391223 107 ntBASIC2.25□□□□□ -2.05
CCDC38Q502W7 AL117342.1-201ENST00000404861 406 ntBASIC2.25□□□□□ -2.05
CCDC38Q502W7 AC016909.1-201ENST00000415916 166 ntBASIC2.25□□□□□ -2.05
CCDC38Q502W7 AL137792.2-201ENST00000443484 235 ntBASIC2.25□□□□□ -2.05
CCDC38Q502W7 RPL23AP7-203ENST00000449021 469 ntBASIC2.25□□□□□ -2.05
CCDC38Q502W7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC38Q502W7 YWHAEP4-201ENST00000505390 198 ntBASIC2.25□□□□□ -2.05
CCDC38Q502W7 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.25□□□□□ -2.05
CCDC38Q502W7 RNU1-40P-201ENST00000516816 164 ntBASIC2.25□□□□□ -2.05
CCDC38Q502W7 RNU1-97P-201ENST00000516872 164 ntBASIC2.25□□□□□ -2.05
CCDC38Q502W7 SNRPGP18-201ENST00000553000 214 ntBASIC2.25□□□□□ -2.05
CCDC38Q502W7 MIR3945-201ENST00000581853 98 ntBASIC2.25□□□□□ -2.05
CCDC38Q502W7 MIR3124-201ENST00000582636 67 ntBASIC2.25□□□□□ -2.05
CCDC38Q502W7 AL773524.1-201ENST00000614065 229 ntBASIC2.25□□□□□ -2.05
CCDC38Q502W7 SDR42E1P4-201ENST00000620894 481 ntBASIC2.25□□□□□ -2.05
CCDC38Q502W7 MIR338-201ENST00000636369 67 ntBASIC2.25□□□□□ -2.05
CCDC38Q502W7 CENPCP1-201ENST00000533085 2578 ntBASIC2.24□□□□□ -2.05
CCDC38Q502W7 MIR410-201ENST00000362222 80 ntBASIC2.24□□□□□ -2.05
CCDC38Q502W7 Y_RNA.27-201ENST00000362540 103 ntBASIC2.24□□□□□ -2.05
CCDC38Q502W7 RNU6-1266P-201ENST00000362794 105 ntBASIC2.24□□□□□ -2.05
CCDC38Q502W7 RNU6-862P-201ENST00000362804 105 ntBASIC2.24□□□□□ -2.05
CCDC38Q502W7 snoU2-30.2-201ENST00000362805 70 ntBASIC2.24□□□□□ -2.05
CCDC38Q502W7 MIR1253-201ENST00000408273 105 ntBASIC2.24□□□□□ -2.05
CCDC38Q502W7 AC099677.2-201ENST00000436385 175 ntBASIC2.24□□□□□ -2.05
CCDC38Q502W7 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.24□□□□□ -2.05
CCDC38Q502W7 FCF1P4-201ENST00000448326 183 ntBASIC2.24□□□□□ -2.05
CCDC38Q502W7 RNU6-625P-201ENST00000459412 107 ntBASIC2.24□□□□□ -2.05
CCDC38Q502W7 RNU4-77P-201ENST00000516692 156 ntBASIC2.24□□□□□ -2.05
CCDC38Q502W7 MIR514B-201ENST00000516774 80 ntBASIC2.24□□□□□ -2.05
CCDC38Q502W7 AC023442.1-201ENST00000531247 422 ntBASIC2.24□□□□□ -2.05
CCDC38Q502W7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC38Q502W7 AL109918.3-201ENST00000603072 338 ntBASIC2.24□□□□□ -2.05
CCDC38Q502W7 AC005034.5-201ENST00000604219 466 ntBASIC2.24□□□□□ -2.05
CCDC38Q502W7 AC064859.1-201ENST00000624741 174 ntBASIC2.24□□□□□ -2.05
CCDC38Q502W7 AL606534.2-204ENST00000635008 178 ntBASIC2.24□□□□□ -2.05
CCDC38Q502W7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC38Q502W7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CCDC38Q502W7 U8.2-201ENST00000363156 134 ntBASIC2.23□□□□□ -2.05
CCDC38Q502W7 RNA5SP160-201ENST00000364866 120 ntBASIC2.23□□□□□ -2.05
CCDC38Q502W7 SNORA70B-201ENST00000384210 135 ntBASIC2.23□□□□□ -2.05
CCDC38Q502W7 SNORD78.2-201ENST00000391076 69 ntBASIC2.23□□□□□ -2.05
CCDC38Q502W7 MIR1261-201ENST00000408659 82 ntBASIC2.23□□□□□ -2.05
CCDC38Q502W7 CST2P1-201ENST00000425770 87 ntBASIC2.23□□□□□ -2.05
CCDC38Q502W7 HMGN2P34-201ENST00000437647 269 ntBASIC2.23□□□□□ -2.05
CCDC38Q502W7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC38Q502W7 SUB1P4-201ENST00000566062 339 ntBASIC2.23□□□□□ -2.05
CCDC38Q502W7 MIR5094-201ENST00000578766 85 ntBASIC2.23□□□□□ -2.05
CCDC38Q502W7 MIR5002-201ENST00000584713 97 ntBASIC2.23□□□□□ -2.05
CCDC38Q502W7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.23□□□□□ -2.05
CCDC38Q502W7 RNU1-96P-201ENST00000364163 162 ntBASIC2.22□□□□□ -2.05
CCDC38Q502W7 RNY1P14-201ENST00000384426 108 ntBASIC2.22□□□□□ -2.05
CCDC38Q502W7 SNORA48.3-201ENST00000391081 134 ntBASIC2.22□□□□□ -2.05
CCDC38Q502W7 AC244636.1-201ENST00000421152 228 ntBASIC2.22□□□□□ -2.05
CCDC38Q502W7 RAB28P5-201ENST00000427490 651 ntBASIC2.22□□□□□ -2.05
CCDC38Q502W7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC38Q502W7 RNA5SP233-201ENST00000459153 113 ntBASIC2.22□□□□□ -2.05
CCDC38Q502W7 RNA5SP200-201ENST00000516360 103 ntBASIC2.22□□□□□ -2.05
CCDC38Q502W7 SNORA40.14-201ENST00000516543 86 ntBASIC2.22□□□□□ -2.05
CCDC38Q502W7 RNU6-1012P-201ENST00000516606 109 ntBASIC2.22□□□□□ -2.05
CCDC38Q502W7 MIR3684-201ENST00000579779 74 ntBASIC2.22□□□□□ -2.05
CCDC38Q502W7 MIR3935-201ENST00000583472 104 ntBASIC2.22□□□□□ -2.05
CCDC38Q502W7 AC104984.5-201ENST00000586878 94 ntBASIC2.22□□□□□ -2.05
CCDC38Q502W7 AC069114.2-201ENST00000604699 304 ntBASIC2.22□□□□□ -2.05
CCDC38Q502W7 AC006157.1-201ENST00000611750 366 ntBASIC2.22□□□□□ -2.05
CCDC38Q502W7 MIR6715A-201ENST00000615929 79 ntBASIC2.22□□□□□ -2.05
CCDC38Q502W7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.22□□□□□ -2.05
CCDC38Q502W7 MTND5P6-201ENST00000422338 1798 ntBASIC2.22□□□□□ -2.05
CCDC38Q502W7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
CCDC38Q502W7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC38Q502W7 RNU6-1310P-201ENST00000384153 107 ntBASIC2.21□□□□□ -2.06
CCDC38Q502W7 Y_RNA.445-201ENST00000384168 102 ntBASIC2.21□□□□□ -2.06
CCDC38Q502W7 MIR515-2-201ENST00000384883 83 ntBASIC2.21□□□□□ -2.06
CCDC38Q502W7 MIR515-1-201ENST00000384884 83 ntBASIC2.21□□□□□ -2.06
CCDC38Q502W7 RNA5SP475-201ENST00000410568 110 ntBASIC2.21□□□□□ -2.06
CCDC38Q502W7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC38Q502W7 RPL23AP6-201ENST00000446637 472 ntBASIC2.21□□□□□ -2.06
CCDC38Q502W7 AL021397.1-201ENST00000451806 248 ntBASIC2.21□□□□□ -2.06
CCDC38Q502W7 AC025033.1-201ENST00000463883 194 ntBASIC2.21□□□□□ -2.06
CCDC38Q502W7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC38Q502W7 MIR4299-201ENST00000577899 72 ntBASIC2.21□□□□□ -2.06
CCDC38Q502W7 MIR5188-201ENST00000583467 113 ntBASIC2.21□□□□□ -2.06
CCDC38Q502W7 AC008749.1-201ENST00000597650 306 ntBASIC2.21□□□□□ -2.06
CCDC38Q502W7 MIR3674-201ENST00000636576 68 ntBASIC2.21□□□□□ -2.06
CCDC38Q502W7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CCDC38Q502W7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC38Q502W7 Y_RNA.813-201ENST00000364639 102 ntBASIC2.2□□□□□ -2.06
CCDC38Q502W7 Y_RNA.287-201ENST00000364853 94 ntBASIC2.2□□□□□ -2.06
CCDC38Q502W7 RNU6-926P-201ENST00000384075 107 ntBASIC2.2□□□□□ -2.06
CCDC38Q502W7 RNU6-417P-201ENST00000384712 107 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms