Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 RNU6-155P-201ENST00000516347 100 ntBASIC2.64□□□□□ -1.99
KHDC1Q4VXA5 RNU6-966P-201ENST00000516479 104 ntBASIC2.64□□□□□ -1.99
KHDC1Q4VXA5 RNU2-34P-201ENST00000516534 121 ntBASIC2.64□□□□□ -1.99
KHDC1Q4VXA5 RNU6-1271P-201ENST00000517049 105 ntBASIC2.64□□□□□ -1.99
KHDC1Q4VXA5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.64□□□□□ -1.99
KHDC1Q4VXA5 MIR3684-201ENST00000579779 74 ntBASIC2.64□□□□□ -1.99
KHDC1Q4VXA5 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.64□□□□□ -1.99
KHDC1Q4VXA5 SDR42E1P4-201ENST00000620894 481 ntBASIC2.64□□□□□ -1.99
KHDC1Q4VXA5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KHDC1Q4VXA5 ZNF271P-202ENST00000465539 1970 ntBASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 VTRNA1-1-201ENST00000363120 99 ntBASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 Y_RNA.243-201ENST00000364481 109 ntBASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 RNU6-1235P-201ENST00000384559 107 ntBASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 SRIP3-201ENST00000413200 219 ntBASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 CR769767.1-201ENST00000436337 346 ntBASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 POLR2KP2-201ENST00000438155 177 ntBASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 RNU6-498P-201ENST00000459468 107 ntBASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 RNU6-221P-201ENST00000459541 99 ntBASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 SERF1AP1-201ENST00000514575 187 ntBASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 RNU6-991P-201ENST00000516168 107 ntBASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 RNU2-31P-201ENST00000516954 155 ntBASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 MIR4635-201ENST00000583759 79 ntBASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 AC012433.1-201ENST00000588916 398 ntBASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 AL137847.3-201ENST00000611521 109 ntBASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 IGHVIII-44-202ENST00000636235 289 ntBASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
KHDC1Q4VXA5 AC135776.4-201ENST00000624300 1904 ntBASIC2.62□□□□□ -1.99
KHDC1Q4VXA5 RNU6-859P-201ENST00000362728 107 ntBASIC2.62□□□□□ -1.99
KHDC1Q4VXA5 Y_RNA.383-201ENST00000383855 97 ntBASIC2.62□□□□□ -1.99
KHDC1Q4VXA5 RNU6-418P-201ENST00000384035 107 ntBASIC2.62□□□□□ -1.99
KHDC1Q4VXA5 Y_RNA.447-201ENST00000384184 113 ntBASIC2.62□□□□□ -1.99
KHDC1Q4VXA5 MTCO1P44-201ENST00000441935 243 ntBASIC2.62□□□□□ -1.99
KHDC1Q4VXA5 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.62□□□□□ -1.99
KHDC1Q4VXA5 RPL23AP3-201ENST00000453844 468 ntBASIC2.62□□□□□ -1.99
KHDC1Q4VXA5 MTND4LP30-201ENST00000454092 297 ntBASIC2.62□□□□□ -1.99
KHDC1Q4VXA5 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.62□□□□□ -1.99
KHDC1Q4VXA5 RNA5SP402-201ENST00000517148 110 ntBASIC2.62□□□□□ -1.99
KHDC1Q4VXA5 AC037487.3-201ENST00000606668 112 ntBASIC2.62□□□□□ -1.99
KHDC1Q4VXA5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.62□□□□□ -1.99
KHDC1Q4VXA5 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
KHDC1Q4VXA5 Y_RNA.136-201ENST00000363444 102 ntBASIC2.61□□□□□ -1.99
KHDC1Q4VXA5 Y_RNA.476-201ENST00000384347 108 ntBASIC2.61□□□□□ -1.99
KHDC1Q4VXA5 Y_RNA.489-201ENST00000384410 101 ntBASIC2.61□□□□□ -1.99
KHDC1Q4VXA5 U3.40-201ENST00000408706 208 ntBASIC2.61□□□□□ -1.99
KHDC1Q4VXA5 RNA5SP184-201ENST00000411071 108 ntBASIC2.61□□□□□ -1.99
KHDC1Q4VXA5 AC063976.3-201ENST00000426849 329 ntBASIC2.61□□□□□ -1.99
KHDC1Q4VXA5 AL357134.1-201ENST00000445848 426 ntBASIC2.61□□□□□ -1.99
KHDC1Q4VXA5 AC016717.1-201ENST00000448918 286 ntBASIC2.61□□□□□ -1.99
KHDC1Q4VXA5 PRELID3BP1-201ENST00000457142 540 ntBASIC2.61□□□□□ -1.99
KHDC1Q4VXA5 RNU7-26P-201ENST00000458980 63 ntBASIC2.61□□□□□ -1.99
KHDC1Q4VXA5 RPPH1-2P-201ENST00000516688 293 ntBASIC2.61□□□□□ -1.99
KHDC1Q4VXA5 SNORA31.15-201ENST00000516771 132 ntBASIC2.61□□□□□ -1.99
KHDC1Q4VXA5 AC087441.2-201ENST00000529141 262 ntBASIC2.61□□□□□ -1.99
KHDC1Q4VXA5 AC025754.2-201ENST00000606491 432 ntBASIC2.61□□□□□ -1.99
KHDC1Q4VXA5 U6.115-201ENST00000636045 103 ntBASIC2.61□□□□□ -1.99
KHDC1Q4VXA5 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.61□□□□□ -1.99
KHDC1Q4VXA5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.6□□□□□ -1.99
KHDC1Q4VXA5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
KHDC1Q4VXA5 Y_RNA.478-201ENST00000384358 107 ntBASIC2.6□□□□□ -1.99
KHDC1Q4VXA5 RNU6-1072P-201ENST00000384703 107 ntBASIC2.6□□□□□ -1.99
KHDC1Q4VXA5 RNU6-443P-201ENST00000384780 107 ntBASIC2.6□□□□□ -1.99
KHDC1Q4VXA5 RNA5SP210-201ENST00000391034 120 ntBASIC2.6□□□□□ -1.99
KHDC1Q4VXA5 MIR548H3-201ENST00000408771 118 ntBASIC2.6□□□□□ -1.99
KHDC1Q4VXA5 RNA5SP492-201ENST00000411330 114 ntBASIC2.6□□□□□ -1.99
KHDC1Q4VXA5 RNU6-57P-201ENST00000411348 103 ntBASIC2.6□□□□□ -1.99
KHDC1Q4VXA5 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.6□□□□□ -1.99
KHDC1Q4VXA5 SUMO1P2-201ENST00000452524 304 ntBASIC2.6□□□□□ -1.99
KHDC1Q4VXA5 AC010531.2-201ENST00000465012 153 ntBASIC2.6□□□□□ -1.99
KHDC1Q4VXA5 RNU6-436P-201ENST00000516171 114 ntBASIC2.6□□□□□ -1.99
KHDC1Q4VXA5 SCARNA24.2-201ENST00000516968 130 ntBASIC2.6□□□□□ -1.99
KHDC1Q4VXA5 MIR4672-201ENST00000583126 81 ntBASIC2.6□□□□□ -1.99
KHDC1Q4VXA5 AC005828.6-201ENST00000606610 232 ntBASIC2.6□□□□□ -1.99
KHDC1Q4VXA5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KHDC1Q4VXA5 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KHDC1Q4VXA5 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
KHDC1Q4VXA5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
KHDC1Q4VXA5 SNORD115-30-201ENST00000364117 82 ntBASIC2.59□□□□□ -1.99
KHDC1Q4VXA5 Y_RNA.352-201ENST00000365439 102 ntBASIC2.59□□□□□ -1.99
KHDC1Q4VXA5 SNORD14D-201ENST00000384390 87 ntBASIC2.59□□□□□ -1.99
KHDC1Q4VXA5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.59□□□□□ -1.99
KHDC1Q4VXA5 MTND1P19-201ENST00000511780 315 ntBASIC2.59□□□□□ -1.99
KHDC1Q4VXA5 CYCSP26-201ENST00000534107 320 ntBASIC2.59□□□□□ -1.99
KHDC1Q4VXA5 MIR3128-201ENST00000581957 66 ntBASIC2.59□□□□□ -1.99
KHDC1Q4VXA5 AC006023.1-201ENST00000603944 259 ntBASIC2.59□□□□□ -1.99
KHDC1Q4VXA5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.59□□□□□ -1.99
KHDC1Q4VXA5 AC013412.1-201ENST00000610687 192 ntBASIC2.59□□□□□ -1.99
KHDC1Q4VXA5 MIR6852-201ENST00000621699 66 ntBASIC2.59□□□□□ -1.99
KHDC1Q4VXA5 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.59□□□□□ -2
KHDC1Q4VXA5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.58□□□□□ -2
KHDC1Q4VXA5 MIR340-201ENST00000362125 95 ntBASIC2.58□□□□□ -2
KHDC1Q4VXA5 Y_RNA.99-201ENST00000363138 105 ntBASIC2.58□□□□□ -2
KHDC1Q4VXA5 Y_RNA.111-201ENST00000363248 100 ntBASIC2.58□□□□□ -2
KHDC1Q4VXA5 RNU6-324P-201ENST00000363957 106 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms