Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 SNORA8.3-201ENST00000384679 139 ntBASIC-0.83□□□□□ -2.54
CCDC58Q4VC31 MIR489-201ENST00000384923 84 ntBASIC-0.83□□□□□ -2.54
CCDC58Q4VC31 Y_RNA.578-201ENST00000390903 88 ntBASIC-0.83□□□□□ -2.54
CCDC58Q4VC31 SNORD100-201ENST00000408573 76 ntBASIC-0.83□□□□□ -2.54
CCDC58Q4VC31 MIR1302-7-201ENST00000408841 72 ntBASIC-0.83□□□□□ -2.54
CCDC58Q4VC31 AC114491.1-201ENST00000416095 246 ntBASIC-0.83□□□□□ -2.54
CCDC58Q4VC31 RPL17P35-201ENST00000432217 549 ntBASIC-0.83□□□□□ -2.54
CCDC58Q4VC31 RNU7-129P-201ENST00000516128 62 ntBASIC-0.83□□□□□ -2.54
CCDC58Q4VC31 AC013828.2-201ENST00000532487 235 ntBASIC-0.83□□□□□ -2.54
CCDC58Q4VC31 MRPS36P4-201ENST00000534436 298 ntBASIC-0.83□□□□□ -2.54
CCDC58Q4VC31 AC098679.4-201ENST00000624241 654 ntBASIC-0.83□□□□□ -2.54
CCDC58Q4VC31 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.84□□□□□ -2.54
CCDC58Q4VC31 MIR454-201ENST00000390180 115 ntBASIC-0.84□□□□□ -2.54
CCDC58Q4VC31 RNA5SP482-201ENST00000391269 118 ntBASIC-0.84□□□□□ -2.54
CCDC58Q4VC31 AC010376.1-201ENST00000522101 334 ntBASIC-0.84□□□□□ -2.54
CCDC58Q4VC31 AC068587.4-201ENST00000533893 186 ntBASIC-0.84□□□□□ -2.54
CCDC58Q4VC31 AC123904.2-201ENST00000548059 300 ntBASIC-0.84□□□□□ -2.54
CCDC58Q4VC31 AC010999.1-201ENST00000611856 324 ntBASIC-0.84□□□□□ -2.54
CCDC58Q4VC31 AC006927.2-201ENST00000639256 389 ntBASIC-0.84□□□□□ -2.54
CCDC58Q4VC31 RNY4P24-201ENST00000362735 96 ntBASIC-0.85□□□□□ -2.55
CCDC58Q4VC31 AL117339.3-201ENST00000418733 162 ntBASIC-0.85□□□□□ -2.55
CCDC58Q4VC31 MTND1P12-201ENST00000455231 147 ntBASIC-0.85□□□□□ -2.55
CCDC58Q4VC31 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.85□□□□□ -2.55
CCDC58Q4VC31 RNU6-782P-201ENST00000516852 104 ntBASIC-0.85□□□□□ -2.55
CCDC58Q4VC31 SNORA74.3-201ENST00000517108 154 ntBASIC-0.85□□□□□ -2.55
CCDC58Q4VC31 MIR4804-201ENST00000581683 73 ntBASIC-0.85□□□□□ -2.55
CCDC58Q4VC31 AP001180.6-201ENST00000584918 159 ntBASIC-0.85□□□□□ -2.55
CCDC58Q4VC31 AC008521.1-201ENST00000587471 187 ntBASIC-0.85□□□□□ -2.55
CCDC58Q4VC31 AC025449.1-201ENST00000603896 529 ntBASIC-0.85□□□□□ -2.55
CCDC58Q4VC31 AP001836.1-201ENST00000604675 523 ntBASIC-0.85□□□□□ -2.55
CCDC58Q4VC31 RNU6-88P-201ENST00000606801 100 ntBASIC-0.85□□□□□ -2.55
CCDC58Q4VC31 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.86□□□□□ -2.55
CCDC58Q4VC31 RNA5SP457-201ENST00000363657 124 ntBASIC-0.86□□□□□ -2.55
CCDC58Q4VC31 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.86□□□□□ -2.55
CCDC58Q4VC31 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.86□□□□□ -2.55
CCDC58Q4VC31 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.86□□□□□ -2.55
CCDC58Q4VC31 MTCO3P8-201ENST00000453691 755 ntBASIC-0.86□□□□□ -2.55
CCDC58Q4VC31 snoU13.6-201ENST00000458785 104 ntBASIC-0.86□□□□□ -2.55
CCDC58Q4VC31 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.86□□□□□ -2.55
CCDC58Q4VC31 RNA5SP285-201ENST00000516619 119 ntBASIC-0.86□□□□□ -2.55
CCDC58Q4VC31 AC107934.1-201ENST00000522215 217 ntBASIC-0.86□□□□□ -2.55
CCDC58Q4VC31 AC131235.4-201ENST00000609288 620 ntBASIC-0.86□□□□□ -2.55
CCDC58Q4VC31 ZNF204P-201ENST00000416749 2397 ntBASIC-0.86□□□□□ -2.55
CCDC58Q4VC31 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.87□□□□□ -2.55
CCDC58Q4VC31 SNORA67.2-201ENST00000384300 149 ntBASIC-0.87□□□□□ -2.55
CCDC58Q4VC31 MTND3P20-201ENST00000407663 186 ntBASIC-0.87□□□□□ -2.55
CCDC58Q4VC31 MIR1185-2-201ENST00000408687 86 ntBASIC-0.87□□□□□ -2.55
CCDC58Q4VC31 AC005042.3-201ENST00000453230 174 ntBASIC-0.87□□□□□ -2.55
CCDC58Q4VC31 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.87□□□□□ -2.55
CCDC58Q4VC31 AC026371.1-201ENST00000551867 419 ntBASIC-0.87□□□□□ -2.55
CCDC58Q4VC31 AC103996.1-201ENST00000555468 102 ntBASIC-0.87□□□□□ -2.55
CCDC58Q4VC31 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.87□□□□□ -2.55
CCDC58Q4VC31 AC009712.1-201ENST00000564938 316 ntBASIC-0.87□□□□□ -2.55
CCDC58Q4VC31 AC012467.1-201ENST00000607740 256 ntBASIC-0.87□□□□□ -2.55
CCDC58Q4VC31 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.87□□□□□ -2.55
CCDC58Q4VC31 MIR6759-201ENST00000638110 65 ntBASIC-0.87□□□□□ -2.55
CCDC58Q4VC31 RNU6-161P-201ENST00000363051 106 ntBASIC-0.88□□□□□ -2.55
CCDC58Q4VC31 SNORD115-24-201ENST00000363528 82 ntBASIC-0.88□□□□□ -2.55
CCDC58Q4VC31 RNU6-560P-201ENST00000364007 108 ntBASIC-0.88□□□□□ -2.55
CCDC58Q4VC31 SNORD14.1-201ENST00000365609 90 ntBASIC-0.88□□□□□ -2.55
CCDC58Q4VC31 RNU6-46P-201ENST00000383860 107 ntBASIC-0.88□□□□□ -2.55
CCDC58Q4VC31 SNORA24.1-201ENST00000384401 135 ntBASIC-0.88□□□□□ -2.55
CCDC58Q4VC31 MIR452-201ENST00000385020 85 ntBASIC-0.88□□□□□ -2.55
CCDC58Q4VC31 SNORD75.1-201ENST00000408373 60 ntBASIC-0.88□□□□□ -2.55
CCDC58Q4VC31 RNU4-30P-201ENST00000410245 143 ntBASIC-0.88□□□□□ -2.55
CCDC58Q4VC31 RNA5SP451-201ENST00000410588 110 ntBASIC-0.88□□□□□ -2.55
CCDC58Q4VC31 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.88□□□□□ -2.55
CCDC58Q4VC31 MTND1P4-201ENST00000435196 415 ntBASIC-0.88□□□□□ -2.55
CCDC58Q4VC31 MTND4P32-201ENST00000437189 1237 ntBASIC-0.88□□□□□ -2.55
CCDC58Q4VC31 AC087499.4-201ENST00000448505 178 ntBASIC-0.88□□□□□ -2.55
CCDC58Q4VC31 PCNPP5-201ENST00000452246 481 ntBASIC-0.88□□□□□ -2.55
CCDC58Q4VC31 RPS29P15-201ENST00000458329 171 ntBASIC-0.88□□□□□ -2.55
CCDC58Q4VC31 RNA5SP454-201ENST00000517231 127 ntBASIC-0.88□□□□□ -2.55
CCDC58Q4VC31 MIR101-1-201ENST00000362265 75 ntBASIC-0.89□□□□□ -2.55
CCDC58Q4VC31 RNU4-84P-201ENST00000364200 139 ntBASIC-0.89□□□□□ -2.55
CCDC58Q4VC31 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.89□□□□□ -2.55
CCDC58Q4VC31 MIR562-201ENST00000384894 95 ntBASIC-0.89□□□□□ -2.55
CCDC58Q4VC31 RNU2-8P-201ENST00000410727 190 ntBASIC-0.89□□□□□ -2.55
CCDC58Q4VC31 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.89□□□□□ -2.55
CCDC58Q4VC31 AC069271.1-201ENST00000445577 156 ntBASIC-0.89□□□□□ -2.55
CCDC58Q4VC31 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.89□□□□□ -2.55
CCDC58Q4VC31 RPL17P19-201ENST00000489069 552 ntBASIC-0.89□□□□□ -2.55
CCDC58Q4VC31 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.89□□□□□ -2.55
CCDC58Q4VC31 MIR2115-201ENST00000516657 100 ntBASIC-0.89□□□□□ -2.55
CCDC58Q4VC31 RNU6-58P-201ENST00000517143 103 ntBASIC-0.89□□□□□ -2.55
CCDC58Q4VC31 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.89□□□□□ -2.55
CCDC58Q4VC31 AC104383.1-201ENST00000530297 370 ntBASIC-0.89□□□□□ -2.55
CCDC58Q4VC31 MTND4LP25-201ENST00000570218 163 ntBASIC-0.89□□□□□ -2.55
CCDC58Q4VC31 AP000907.4-201ENST00000604143 237 ntBASIC-0.89□□□□□ -2.55
CCDC58Q4VC31 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.89□□□□□ -2.55
CCDC58Q4VC31 AL391099.1-201ENST00000624635 187 ntBASIC-0.89□□□□□ -2.55
CCDC58Q4VC31 SNORA36.1-201ENST00000363424 132 ntBASIC-0.9□□□□□ -2.55
CCDC58Q4VC31 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.9□□□□□ -2.55
CCDC58Q4VC31 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.9□□□□□ -2.55
CCDC58Q4VC31 MTND4P19-201ENST00000446659 478 ntBASIC-0.9□□□□□ -2.55
CCDC58Q4VC31 RNU7-43P-201ENST00000516554 64 ntBASIC-0.9□□□□□ -2.55
CCDC58Q4VC31 RNU6-334P-201ENST00000517072 102 ntBASIC-0.9□□□□□ -2.55
CCDC58Q4VC31 RNU6-430P-201ENST00000517078 107 ntBASIC-0.9□□□□□ -2.55
CCDC58Q4VC31 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.9□□□□□ -2.55
CCDC58Q4VC31 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms