Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.75□□□□□ -1.97
LONRF3Q496Y0 LINC02555-201ENST00000563933 1951 ntBASIC2.75□□□□□ -1.97
LONRF3Q496Y0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LONRF3Q496Y0 RNU6-727P-201ENST00000363592 107 ntBASIC2.75□□□□□ -1.97
LONRF3Q496Y0 SNORA16B-201ENST00000364674 135 ntBASIC2.75□□□□□ -1.97
LONRF3Q496Y0 RNU1-51P-201ENST00000365345 176 ntBASIC2.75□□□□□ -1.97
LONRF3Q496Y0 Y_RNA.401-201ENST00000383965 117 ntBASIC2.75□□□□□ -1.97
LONRF3Q496Y0 MIR518C-201ENST00000384822 101 ntBASIC2.75□□□□□ -1.97
LONRF3Q496Y0 AL357139.1-201ENST00000407792 426 ntBASIC2.75□□□□□ -1.97
LONRF3Q496Y0 RPL21P38-201ENST00000418090 167 ntBASIC2.75□□□□□ -1.97
LONRF3Q496Y0 AC007395.1-201ENST00000451333 677 ntBASIC2.75□□□□□ -1.97
LONRF3Q496Y0 AC098869.1-201ENST00000481627 292 ntBASIC2.75□□□□□ -1.97
LONRF3Q496Y0 RRN3P3-201ENST00000549207 578 ntBASIC2.75□□□□□ -1.97
LONRF3Q496Y0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.75□□□□□ -1.97
LONRF3Q496Y0 MIR4287-201ENST00000579398 78 ntBASIC2.75□□□□□ -1.97
LONRF3Q496Y0 MIR4300-201ENST00000581016 96 ntBASIC2.75□□□□□ -1.97
LONRF3Q496Y0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.75□□□□□ -1.97
LONRF3Q496Y0 MIR376A1-201ENST00000616574 68 ntBASIC2.75□□□□□ -1.97
LONRF3Q496Y0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
LONRF3Q496Y0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
LONRF3Q496Y0 RNU6-961P-201ENST00000363893 105 ntBASIC2.74□□□□□ -1.97
LONRF3Q496Y0 Y_RNA.376-201ENST00000365638 108 ntBASIC2.74□□□□□ -1.97
LONRF3Q496Y0 Y_RNA.461-201ENST00000384263 103 ntBASIC2.74□□□□□ -1.97
LONRF3Q496Y0 RNU6-472P-201ENST00000384299 107 ntBASIC2.74□□□□□ -1.97
LONRF3Q496Y0 RNU6-937P-201ENST00000384325 106 ntBASIC2.74□□□□□ -1.97
LONRF3Q496Y0 MT-TW-201ENST00000387382 68 ntBASIC2.74□□□□□ -1.97
LONRF3Q496Y0 SNORD115-46-201ENST00000390982 71 ntBASIC2.74□□□□□ -1.97
LONRF3Q496Y0 RNU2-48P-201ENST00000410694 191 ntBASIC2.74□□□□□ -1.97
LONRF3Q496Y0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.74□□□□□ -1.97
LONRF3Q496Y0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.74□□□□□ -1.97
LONRF3Q496Y0 RNU6-408P-201ENST00000515910 100 ntBASIC2.74□□□□□ -1.97
LONRF3Q496Y0 RNU2-44P-201ENST00000516795 194 ntBASIC2.74□□□□□ -1.97
LONRF3Q496Y0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.74□□□□□ -1.97
LONRF3Q496Y0 MIR5006-201ENST00000583027 110 ntBASIC2.74□□□□□ -1.97
LONRF3Q496Y0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.74□□□□□ -1.97
LONRF3Q496Y0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.74□□□□□ -1.97
LONRF3Q496Y0 AL590808.1-201ENST00000618696 141 ntBASIC2.74□□□□□ -1.97
LONRF3Q496Y0 SDR42E1P4-201ENST00000620894 481 ntBASIC2.74□□□□□ -1.97
LONRF3Q496Y0 AC008555.8-201ENST00000623602 2168 ntBASIC2.73□□□□□ -1.97
LONRF3Q496Y0 AL033519.2-201ENST00000403958 392 ntBASIC2.73□□□□□ -1.97
LONRF3Q496Y0 MIR1302-6-201ENST00000408466 90 ntBASIC2.73□□□□□ -1.97
LONRF3Q496Y0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.73□□□□□ -1.97
LONRF3Q496Y0 AC005002.2-201ENST00000438228 269 ntBASIC2.73□□□□□ -1.97
LONRF3Q496Y0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.73□□□□□ -1.97
LONRF3Q496Y0 UQCRBP2-201ENST00000447827 297 ntBASIC2.73□□□□□ -1.97
LONRF3Q496Y0 AC093259.1-201ENST00000509755 300 ntBASIC2.73□□□□□ -1.97
LONRF3Q496Y0 Y_RNA.668-201ENST00000516233 93 ntBASIC2.73□□□□□ -1.97
LONRF3Q496Y0 RNU6-570P-201ENST00000517051 105 ntBASIC2.73□□□□□ -1.97
LONRF3Q496Y0 RNA5SP490-201ENST00000517141 136 ntBASIC2.73□□□□□ -1.97
LONRF3Q496Y0 CYCSP23-201ENST00000519781 313 ntBASIC2.73□□□□□ -1.97
LONRF3Q496Y0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.73□□□□□ -1.97
LONRF3Q496Y0 RNU6-626P-201ENST00000363354 107 ntBASIC2.72□□□□□ -1.97
LONRF3Q496Y0 RNU6-234P-201ENST00000365229 104 ntBASIC2.72□□□□□ -1.97
LONRF3Q496Y0 Y_RNA.483-201ENST00000384380 101 ntBASIC2.72□□□□□ -1.97
LONRF3Q496Y0 MIR215-201ENST00000384858 110 ntBASIC2.72□□□□□ -1.97
LONRF3Q496Y0 SRIP3-201ENST00000413200 219 ntBASIC2.72□□□□□ -1.97
LONRF3Q496Y0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.72□□□□□ -1.97
LONRF3Q496Y0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.72□□□□□ -1.97
LONRF3Q496Y0 AC009237.7-201ENST00000447357 229 ntBASIC2.72□□□□□ -1.97
LONRF3Q496Y0 RPS27P21-201ENST00000486977 252 ntBASIC2.72□□□□□ -1.97
LONRF3Q496Y0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.72□□□□□ -1.97
LONRF3Q496Y0 AC074133.1-201ENST00000515696 183 ntBASIC2.72□□□□□ -1.97
LONRF3Q496Y0 RNU5F-4P-201ENST00000516581 114 ntBASIC2.72□□□□□ -1.97
LONRF3Q496Y0 RNU6-344P-201ENST00000516635 111 ntBASIC2.72□□□□□ -1.97
LONRF3Q496Y0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.72□□□□□ -1.97
LONRF3Q496Y0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.72□□□□□ -1.97
LONRF3Q496Y0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.72□□□□□ -1.97
LONRF3Q496Y0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.72□□□□□ -1.97
LONRF3Q496Y0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.72□□□□□ -1.97
LONRF3Q496Y0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.72□□□□□ -1.97
LONRF3Q496Y0 U4.3-201ENST00000621047 82 ntBASIC2.72□□□□□ -1.97
LONRF3Q496Y0 AC064859.1-201ENST00000624741 174 ntBASIC2.72□□□□□ -1.97
LONRF3Q496Y0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.72□□□□□ -1.97
LONRF3Q496Y0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
LONRF3Q496Y0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
LONRF3Q496Y0 Y_RNA.415-201ENST00000384012 112 ntBASIC2.71□□□□□ -1.98
LONRF3Q496Y0 RNU6-20P-201ENST00000384106 107 ntBASIC2.71□□□□□ -1.98
LONRF3Q496Y0 SNORD63-201ENST00000384262 68 ntBASIC2.71□□□□□ -1.98
LONRF3Q496Y0 Y_RNA.462-201ENST00000384268 102 ntBASIC2.71□□□□□ -1.98
LONRF3Q496Y0 SNORD14D-201ENST00000384390 87 ntBASIC2.71□□□□□ -1.98
LONRF3Q496Y0 MIR1262-201ENST00000408276 93 ntBASIC2.71□□□□□ -1.98
LONRF3Q496Y0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.71□□□□□ -1.98
LONRF3Q496Y0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.71□□□□□ -1.98
LONRF3Q496Y0 RN7SL636P-201ENST00000497504 294 ntBASIC2.71□□□□□ -1.98
LONRF3Q496Y0 SNORA31.11-201ENST00000516528 139 ntBASIC2.71□□□□□ -1.98
LONRF3Q496Y0 AC018448.1-201ENST00000552843 316 ntBASIC2.71□□□□□ -1.98
LONRF3Q496Y0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.71□□□□□ -1.98
LONRF3Q496Y0 AC006006.1-201ENST00000603082 144 ntBASIC2.71□□□□□ -1.98
LONRF3Q496Y0 RPL17P51-201ENST00000605218 238 ntBASIC2.71□□□□□ -1.98
LONRF3Q496Y0 AC067747.1-201ENST00000608026 250 ntBASIC2.71□□□□□ -1.98
LONRF3Q496Y0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.71□□□□□ -1.98
LONRF3Q496Y0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.71□□□□□ -1.98
LONRF3Q496Y0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.71□□□□□ -1.98
LONRF3Q496Y0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
LONRF3Q496Y0 Z82195.2-201ENST00000612348 18351 ntBASIC2.71□□□□□ -1.98
LONRF3Q496Y0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LONRF3Q496Y0 Y_RNA.84-201ENST00000363011 104 ntBASIC2.7□□□□□ -1.98
LONRF3Q496Y0 snoU2_19.2-201ENST00000363024 80 ntBASIC2.7□□□□□ -1.98
LONRF3Q496Y0 Y_RNA.288-201ENST00000364854 92 ntBASIC2.7□□□□□ -1.98
LONRF3Q496Y0 RNU6-438P-201ENST00000365561 103 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 330.4 ms