Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 MTCO1P5-201ENST00000433573 344 ntBASIC3.1□□□□□ -1.91
SSRP1Q08945 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.1□□□□□ -1.91
SSRP1Q08945 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.1□□□□□ -1.91
SSRP1Q08945 RNU6-948P-201ENST00000516374 107 ntBASIC3.1□□□□□ -1.91
SSRP1Q08945 RNU2-34P-201ENST00000516534 121 ntBASIC3.1□□□□□ -1.91
SSRP1Q08945 RNU6-667P-201ENST00000517186 102 ntBASIC3.1□□□□□ -1.91
SSRP1Q08945 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.1□□□□□ -1.91
SSRP1Q08945 MIR4635-201ENST00000583759 79 ntBASIC3.1□□□□□ -1.91
SSRP1Q08945 AL033523.1-201ENST00000605153 153 ntBASIC3.1□□□□□ -1.91
SSRP1Q08945 BX284668.6-201ENST00000606899 438 ntBASIC3.1□□□□□ -1.91
SSRP1Q08945 Y_RNA.44-201ENST00000362676 108 ntBASIC3.09□□□□□ -1.91
SSRP1Q08945 RNU6-324P-201ENST00000363957 106 ntBASIC3.09□□□□□ -1.91
SSRP1Q08945 SNORD115-30-201ENST00000364117 82 ntBASIC3.09□□□□□ -1.91
SSRP1Q08945 SNORA25B-201ENST00000365507 128 ntBASIC3.09□□□□□ -1.91
SSRP1Q08945 RN7SKP123-201ENST00000410732 291 ntBASIC3.09□□□□□ -1.91
SSRP1Q08945 RNA5SP344-201ENST00000411081 104 ntBASIC3.09□□□□□ -1.91
SSRP1Q08945 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.09□□□□□ -1.91
SSRP1Q08945 AC025750.2-201ENST00000442609 450 ntBASIC3.09□□□□□ -1.91
SSRP1Q08945 RNU6-221P-201ENST00000459541 99 ntBASIC3.09□□□□□ -1.91
SSRP1Q08945 AC093259.1-201ENST00000509755 300 ntBASIC3.09□□□□□ -1.91
SSRP1Q08945 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.09□□□□□ -1.91
SSRP1Q08945 RNU6-991P-201ENST00000516168 107 ntBASIC3.09□□□□□ -1.91
SSRP1Q08945 RNA5SP76-201ENST00000516277 87 ntBASIC3.09□□□□□ -1.91
SSRP1Q08945 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.09□□□□□ -1.91
SSRP1Q08945 MIR3668-201ENST00000582138 75 ntBASIC3.09□□□□□ -1.91
SSRP1Q08945 AC078938.1-201ENST00000620993 318 ntBASIC3.09□□□□□ -1.91
SSRP1Q08945 U6.115-201ENST00000636045 103 ntBASIC3.09□□□□□ -1.91
SSRP1Q08945 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
SSRP1Q08945 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
SSRP1Q08945 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SSRP1Q08945 Y_RNA.257-201ENST00000364596 102 ntBASIC3.08□□□□□ -1.92
SSRP1Q08945 Y_RNA.277-201ENST00000364754 102 ntBASIC3.08□□□□□ -1.92
SSRP1Q08945 Y_RNA.332-201ENST00000365271 113 ntBASIC3.08□□□□□ -1.92
SSRP1Q08945 RNU6-1235P-201ENST00000384559 107 ntBASIC3.08□□□□□ -1.92
SSRP1Q08945 MIR592-201ENST00000384959 97 ntBASIC3.08□□□□□ -1.92
SSRP1Q08945 RNU6-57P-201ENST00000411348 103 ntBASIC3.08□□□□□ -1.92
SSRP1Q08945 AC009238.1-201ENST00000442165 424 ntBASIC3.08□□□□□ -1.92
SSRP1Q08945 AC009237.6-201ENST00000446969 424 ntBASIC3.08□□□□□ -1.92
SSRP1Q08945 AC016717.1-201ENST00000448918 286 ntBASIC3.08□□□□□ -1.92
SSRP1Q08945 SUMO1P2-201ENST00000452524 304 ntBASIC3.08□□□□□ -1.92
SSRP1Q08945 RNU6-498P-201ENST00000459468 107 ntBASIC3.08□□□□□ -1.92
SSRP1Q08945 AC091959.1-201ENST00000495857 238 ntBASIC3.08□□□□□ -1.92
SSRP1Q08945 RNU6-436P-201ENST00000516171 114 ntBASIC3.08□□□□□ -1.92
SSRP1Q08945 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.08□□□□□ -1.92
SSRP1Q08945 GTF3AP2-201ENST00000557014 266 ntBASIC3.08□□□□□ -1.92
SSRP1Q08945 MIR3145-201ENST00000580727 82 ntBASIC3.08□□□□□ -1.92
SSRP1Q08945 AC141273.2-201ENST00000618989 130 ntBASIC3.08□□□□□ -1.92
SSRP1Q08945 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.08□□□□□ -1.92
SSRP1Q08945 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.07□□□□□ -1.92
SSRP1Q08945 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.07□□□□□ -1.92
SSRP1Q08945 SNORD56.5-201ENST00000364281 72 ntBASIC3.07□□□□□ -1.92
SSRP1Q08945 Y_RNA.329-201ENST00000365209 107 ntBASIC3.07□□□□□ -1.92
SSRP1Q08945 RNU6-418P-201ENST00000384035 107 ntBASIC3.07□□□□□ -1.92
SSRP1Q08945 Y_RNA.539-201ENST00000384635 107 ntBASIC3.07□□□□□ -1.92
SSRP1Q08945 AL031003.1-201ENST00000404229 172 ntBASIC3.07□□□□□ -1.92
SSRP1Q08945 AC123900.1-201ENST00000420390 96 ntBASIC3.07□□□□□ -1.92
SSRP1Q08945 AC024067.1-201ENST00000426199 223 ntBASIC3.07□□□□□ -1.92
SSRP1Q08945 RNU6-111P-201ENST00000517179 105 ntBASIC3.07□□□□□ -1.92
SSRP1Q08945 AL512605.2-201ENST00000592972 256 ntBASIC3.07□□□□□ -1.92
SSRP1Q08945 DEFB117-201ENST00000602356 141 ntBASIC3.07□□□□□ -1.92
SSRP1Q08945 AC025754.2-201ENST00000606491 432 ntBASIC3.07□□□□□ -1.92
SSRP1Q08945 AC005828.6-201ENST00000606610 232 ntBASIC3.07□□□□□ -1.92
SSRP1Q08945 MIR7106-201ENST00000612419 65 ntBASIC3.07□□□□□ -1.92
SSRP1Q08945 MIR6733-201ENST00000635723 61 ntBASIC3.07□□□□□ -1.92
SSRP1Q08945 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSRP1Q08945 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SSRP1Q08945 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SSRP1Q08945 RNU4-80P-201ENST00000363200 141 ntBASIC3.06□□□□□ -1.92
SSRP1Q08945 SNORD14D-201ENST00000384390 87 ntBASIC3.06□□□□□ -1.92
SSRP1Q08945 RNU6-1248P-201ENST00000391096 64 ntBASIC3.06□□□□□ -1.92
SSRP1Q08945 SNORD58.1-201ENST00000391313 66 ntBASIC3.06□□□□□ -1.92
SSRP1Q08945 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
SSRP1Q08945 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.06□□□□□ -1.92
SSRP1Q08945 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.06□□□□□ -1.92
SSRP1Q08945 AC010531.2-201ENST00000465012 153 ntBASIC3.06□□□□□ -1.92
SSRP1Q08945 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.06□□□□□ -1.92
SSRP1Q08945 RPL21P9-201ENST00000556149 474 ntBASIC3.06□□□□□ -1.92
SSRP1Q08945 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.06□□□□□ -1.92
SSRP1Q08945 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.06□□□□□ -1.92
SSRP1Q08945 SNORA5B-201ENST00000363786 132 ntBASIC3.05□□□□□ -1.92
SSRP1Q08945 Y_RNA.275-201ENST00000364726 110 ntBASIC3.05□□□□□ -1.92
SSRP1Q08945 Y_RNA.515-201ENST00000384535 112 ntBASIC3.05□□□□□ -1.92
SSRP1Q08945 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.05□□□□□ -1.92
SSRP1Q08945 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.05□□□□□ -1.92
SSRP1Q08945 AL357134.1-201ENST00000445848 426 ntBASIC3.05□□□□□ -1.92
SSRP1Q08945 SNORD109B-201ENST00000458961 67 ntBASIC3.05□□□□□ -1.92
SSRP1Q08945 SNORD109A-201ENST00000459128 67 ntBASIC3.05□□□□□ -1.92
SSRP1Q08945 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.05□□□□□ -1.92
SSRP1Q08945 SNORA27.4-201ENST00000516650 95 ntBASIC3.05□□□□□ -1.92
SSRP1Q08945 NDUFA5P6-201ENST00000542110 379 ntBASIC3.05□□□□□ -1.92
SSRP1Q08945 AC013412.1-201ENST00000610687 192 ntBASIC3.05□□□□□ -1.92
SSRP1Q08945 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SSRP1Q08945 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SSRP1Q08945 UBE2WP1-201ENST00000362030 340 ntBASIC3.04□□□□□ -1.92
SSRP1Q08945 Y_RNA.361-201ENST00000365515 120 ntBASIC3.04□□□□□ -1.92
SSRP1Q08945 RNU6-338P-201ENST00000383888 105 ntBASIC3.04□□□□□ -1.92
SSRP1Q08945 RNA5SP210-201ENST00000391034 120 ntBASIC3.04□□□□□ -1.92
SSRP1Q08945 SNORA26.7-201ENST00000391288 122 ntBASIC3.04□□□□□ -1.92
SSRP1Q08945 SRIP3-201ENST00000413200 219 ntBASIC3.04□□□□□ -1.92
SSRP1Q08945 MTCO1P44-201ENST00000441935 243 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms