Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RNU1-57P-201ENST00000384491 166 ntBASIC2.31□□□□□ -2.04
LTBQ06643 MIR627-201ENST00000384979 97 ntBASIC2.31□□□□□ -2.04
LTBQ06643 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.31□□□□□ -2.04
LTBQ06643 RNU6-1199P-201ENST00000411249 104 ntBASIC2.31□□□□□ -2.04
LTBQ06643 RAB28P5-201ENST00000427490 651 ntBASIC2.31□□□□□ -2.04
LTBQ06643 AC027124.2-201ENST00000428249 105 ntBASIC2.31□□□□□ -2.04
LTBQ06643 MRPS10P1-201ENST00000448483 130 ntBASIC2.31□□□□□ -2.04
LTBQ06643 RNU6-625P-201ENST00000459412 107 ntBASIC2.31□□□□□ -2.04
LTBQ06643 MRPS36P2-201ENST00000512569 299 ntBASIC2.31□□□□□ -2.04
LTBQ06643 AC074133.1-201ENST00000515696 183 ntBASIC2.31□□□□□ -2.04
LTBQ06643 SNORA81.3-201ENST00000517283 198 ntBASIC2.31□□□□□ -2.04
LTBQ06643 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.31□□□□□ -2.04
LTBQ06643 EIF4A1P12-201ENST00000551910 141 ntBASIC2.31□□□□□ -2.04
LTBQ06643 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
LTBQ06643 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.31□□□□□ -2.04
LTBQ06643 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
LTBQ06643 AC004467.1-201ENST00000615678 330 ntBASIC2.31□□□□□ -2.04
LTBQ06643 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LTBQ06643 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.31□□□□□ -2.04
LTBQ06643 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LTBQ06643 MIR410-201ENST00000362222 80 ntBASIC2.3□□□□□ -2.04
LTBQ06643 Y_RNA.117-201ENST00000363294 101 ntBASIC2.3□□□□□ -2.04
LTBQ06643 RNU6-1210P-201ENST00000363775 107 ntBASIC2.3□□□□□ -2.04
LTBQ06643 Y_RNA.200-201ENST00000364018 102 ntBASIC2.3□□□□□ -2.04
LTBQ06643 RNU6-1180P-201ENST00000364935 107 ntBASIC2.3□□□□□ -2.04
LTBQ06643 Y_RNA.383-201ENST00000383855 97 ntBASIC2.3□□□□□ -2.04
LTBQ06643 Y_RNA.415-201ENST00000384012 112 ntBASIC2.3□□□□□ -2.04
LTBQ06643 MIR1298-201ENST00000408783 112 ntBASIC2.3□□□□□ -2.04
LTBQ06643 AL135786.1-201ENST00000415892 214 ntBASIC2.3□□□□□ -2.04
LTBQ06643 MTCO1P5-201ENST00000433573 344 ntBASIC2.3□□□□□ -2.04
LTBQ06643 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.3□□□□□ -2.04
LTBQ06643 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.3□□□□□ -2.04
LTBQ06643 AC004386.2-201ENST00000441858 148 ntBASIC2.3□□□□□ -2.04
LTBQ06643 PRELID3BP1-201ENST00000457142 540 ntBASIC2.3□□□□□ -2.04
LTBQ06643 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.3□□□□□ -2.04
LTBQ06643 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.3□□□□□ -2.04
LTBQ06643 SNORD116-28-201ENST00000516123 91 ntBASIC2.3□□□□□ -2.04
LTBQ06643 RNU6-182P-201ENST00000516970 105 ntBASIC2.3□□□□□ -2.04
LTBQ06643 CYCSP23-201ENST00000519781 313 ntBASIC2.3□□□□□ -2.04
LTBQ06643 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.3□□□□□ -2.04
LTBQ06643 AC027176.1-201ENST00000560204 514 ntBASIC2.3□□□□□ -2.04
LTBQ06643 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.3□□□□□ -2.04
LTBQ06643 SNRPGP20-201ENST00000604477 205 ntBASIC2.3□□□□□ -2.04
LTBQ06643 AC098479.1-201ENST00000609225 154 ntBASIC2.3□□□□□ -2.04
LTBQ06643 uc_338.14-201ENST00000613162 166 ntBASIC2.3□□□□□ -2.04
LTBQ06643 AL590240.4-201ENST00000616908 390 ntBASIC2.3□□□□□ -2.04
LTBQ06643 AC006001.4-201ENST00000622243 395 ntBASIC2.3□□□□□ -2.04
LTBQ06643 AC010297.1-201ENST00000623948 149 ntBASIC2.3□□□□□ -2.04
LTBQ06643 AC091932.3-201ENST00000624223 323 ntBASIC2.3□□□□□ -2.04
LTBQ06643 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.3□□□□□ -2.04
LTBQ06643 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LTBQ06643 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.29□□□□□ -2.04
LTBQ06643 Y_RNA.122-201ENST00000363331 96 ntBASIC2.29□□□□□ -2.04
LTBQ06643 Y_RNA.136-201ENST00000363444 102 ntBASIC2.29□□□□□ -2.04
LTBQ06643 RNU5F-3P-201ENST00000363767 117 ntBASIC2.29□□□□□ -2.04
LTBQ06643 Y_RNA.226-201ENST00000364337 114 ntBASIC2.29□□□□□ -2.04
LTBQ06643 SNORA18.2-201ENST00000383865 132 ntBASIC2.29□□□□□ -2.04
LTBQ06643 SNORA46.1-201ENST00000391069 153 ntBASIC2.29□□□□□ -2.04
LTBQ06643 SNORA12-201ENST00000391162 147 ntBASIC2.29□□□□□ -2.04
LTBQ06643 RNA5SP181-201ENST00000410246 98 ntBASIC2.29□□□□□ -2.04
LTBQ06643 RPL23AP36-201ENST00000413895 458 ntBASIC2.29□□□□□ -2.04
LTBQ06643 AL390729.2-201ENST00000416137 156 ntBASIC2.29□□□□□ -2.04
LTBQ06643 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.29□□□□□ -2.04
LTBQ06643 PIGPP3-201ENST00000425307 415 ntBASIC2.29□□□□□ -2.04
LTBQ06643 POLR2KP2-201ENST00000438155 177 ntBASIC2.29□□□□□ -2.04
LTBQ06643 SUMO1P3-201ENST00000439961 304 ntBASIC2.29□□□□□ -2.04
LTBQ06643 AC009237.7-201ENST00000447357 229 ntBASIC2.29□□□□□ -2.04
LTBQ06643 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.29□□□□□ -2.04
LTBQ06643 AC091959.1-201ENST00000495857 238 ntBASIC2.29□□□□□ -2.04
LTBQ06643 SCARNA17.1-201ENST00000516211 143 ntBASIC2.29□□□□□ -2.04
LTBQ06643 SCARNA17.2-201ENST00000516334 143 ntBASIC2.29□□□□□ -2.04
LTBQ06643 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.29□□□□□ -2.04
LTBQ06643 MIR3616-201ENST00000584070 92 ntBASIC2.29□□□□□ -2.04
LTBQ06643 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.29□□□□□ -2.04
LTBQ06643 AL365434.2-201ENST00000607979 234 ntBASIC2.29□□□□□ -2.04
LTBQ06643 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.29□□□□□ -2.04
LTBQ06643 SCARNA17.4-201ENST00000614296 143 ntBASIC2.29□□□□□ -2.04
LTBQ06643 AC004792.1-201ENST00000614523 137 ntBASIC2.29□□□□□ -2.04
LTBQ06643 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.29□□□□□ -2.04
LTBQ06643 CTSLP2-204ENST00000629029 392 ntBASIC2.29□□□□□ -2.04
LTBQ06643 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LTBQ06643 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LTBQ06643 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LTBQ06643 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.29□□□□□ -2.04
LTBQ06643 AC080100.1-201ENST00000624239 5356 ntBASIC2.29□□□□□ -2.04
LTBQ06643 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.28□□□□□ -2.04
LTBQ06643 AC010329.5-201ENST00000623497 2174 ntBASIC2.28□□□□□ -2.04
LTBQ06643 Y_RNA.29-201ENST00000362570 113 ntBASIC2.28□□□□□ -2.04
LTBQ06643 Y_RNA.83-201ENST00000363005 113 ntBASIC2.28□□□□□ -2.04
LTBQ06643 U3.9-201ENST00000363823 204 ntBASIC2.28□□□□□ -2.04
LTBQ06643 Y_RNA.275-201ENST00000364726 110 ntBASIC2.28□□□□□ -2.04
LTBQ06643 SNORD87-201ENST00000364849 89 ntBASIC2.28□□□□□ -2.04
LTBQ06643 SNORA72.2-201ENST00000365028 127 ntBASIC2.28□□□□□ -2.04
LTBQ06643 RNU1-109P-201ENST00000383960 147 ntBASIC2.28□□□□□ -2.04
LTBQ06643 RNA5SP504-201ENST00000410676 117 ntBASIC2.28□□□□□ -2.04
LTBQ06643 RNU4-53P-201ENST00000410828 140 ntBASIC2.28□□□□□ -2.04
LTBQ06643 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.28□□□□□ -2.04
LTBQ06643 AC097463.2-201ENST00000421074 142 ntBASIC2.28□□□□□ -2.04
LTBQ06643 HMGN2P3-201ENST00000433603 273 ntBASIC2.28□□□□□ -2.04
LTBQ06643 HMGN2P5-201ENST00000436882 273 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 233.5 ms