Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 AC095038.3-201ENST00000634439 195 ntBASIC1.79□□□□□ -2.12
CALD1Q05682 SNORA4.2-201ENST00000365313 147 ntBASIC1.78□□□□□ -2.12
CALD1Q05682 RNU6-793P-201ENST00000384233 104 ntBASIC1.78□□□□□ -2.12
CALD1Q05682 RNU6-331P-201ENST00000384724 107 ntBASIC1.78□□□□□ -2.12
CALD1Q05682 MIR548K-201ENST00000408406 116 ntBASIC1.78□□□□□ -2.12
CALD1Q05682 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.78□□□□□ -2.12
CALD1Q05682 RPS29P23-201ENST00000458635 123 ntBASIC1.78□□□□□ -2.12
CALD1Q05682 snoU13.9-201ENST00000458927 103 ntBASIC1.78□□□□□ -2.12
CALD1Q05682 RNU6-1146P-201ENST00000516282 102 ntBASIC1.78□□□□□ -2.12
CALD1Q05682 RNU6-358P-201ENST00000516564 75 ntBASIC1.78□□□□□ -2.12
CALD1Q05682 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.78□□□□□ -2.12
CALD1Q05682 AC080078.2-201ENST00000603766 501 ntBASIC1.78□□□□□ -2.12
CALD1Q05682 MZT1P2-201ENST00000604387 248 ntBASIC1.78□□□□□ -2.12
CALD1Q05682 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.78□□□□□ -2.12
CALD1Q05682 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
CALD1Q05682 RNU6-137P-201ENST00000363680 108 ntBASIC1.77□□□□□ -2.13
CALD1Q05682 RNU6-280P-201ENST00000364145 104 ntBASIC1.77□□□□□ -2.13
CALD1Q05682 RNU6-203P-201ENST00000384038 104 ntBASIC1.77□□□□□ -2.13
CALD1Q05682 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CALD1Q05682 Y_RNA.594-201ENST00000410373 140 ntBASIC1.77□□□□□ -2.13
CALD1Q05682 AC103851.1-201ENST00000506833 274 ntBASIC1.77□□□□□ -2.13
CALD1Q05682 Y_RNA.706-201ENST00000516933 99 ntBASIC1.77□□□□□ -2.13
CALD1Q05682 SUB1P3-201ENST00000564581 315 ntBASIC1.77□□□□□ -2.13
CALD1Q05682 SNORA77B-201ENST00000578179 125 ntBASIC1.77□□□□□ -2.13
CALD1Q05682 Y_RNA.2-201ENST00000362330 96 ntBASIC1.76□□□□□ -2.13
CALD1Q05682 Y_RNA.179-201ENST00000363844 90 ntBASIC1.76□□□□□ -2.13
CALD1Q05682 RNU6-360P-201ENST00000390944 104 ntBASIC1.76□□□□□ -2.13
CALD1Q05682 AC008134.1-201ENST00000420943 193 ntBASIC1.76□□□□□ -2.13
CALD1Q05682 USMG5P1-201ENST00000425964 177 ntBASIC1.76□□□□□ -2.13
CALD1Q05682 AL603825.1-201ENST00000438481 80 ntBASIC1.76□□□□□ -2.13
CALD1Q05682 JTBP1-201ENST00000441314 247 ntBASIC1.76□□□□□ -2.13
CALD1Q05682 AC069257.2-201ENST00000441819 155 ntBASIC1.76□□□□□ -2.13
CALD1Q05682 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.76□□□□□ -2.13
CALD1Q05682 Y_RNA.670-201ENST00000516255 105 ntBASIC1.76□□□□□ -2.13
CALD1Q05682 RNA5SP481-201ENST00000516814 122 ntBASIC1.76□□□□□ -2.13
CALD1Q05682 MTND4LP26-201ENST00000518144 282 ntBASIC1.76□□□□□ -2.13
CALD1Q05682 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.76□□□□□ -2.13
CALD1Q05682 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.76□□□□□ -2.13
CALD1Q05682 AC011712.1-201ENST00000588959 234 ntBASIC1.76□□□□□ -2.13
CALD1Q05682 AC100812.1-201ENST00000607622 580 ntBASIC1.76□□□□□ -2.13
CALD1Q05682 AC005014.2-201ENST00000607795 599 ntBASIC1.76□□□□□ -2.13
CALD1Q05682 MIR8063-201ENST00000621930 81 ntBASIC1.76□□□□□ -2.13
CALD1Q05682 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
CALD1Q05682 Y_RNA.106-201ENST00000363189 100 ntBASIC1.75□□□□□ -2.13
CALD1Q05682 U3.8-201ENST00000363675 217 ntBASIC1.75□□□□□ -2.13
CALD1Q05682 SNORA7.1-201ENST00000363750 139 ntBASIC1.75□□□□□ -2.13
CALD1Q05682 SNORA72.2-201ENST00000365028 127 ntBASIC1.75□□□□□ -2.13
CALD1Q05682 RNU6-1240P-201ENST00000365155 104 ntBASIC1.75□□□□□ -2.13
CALD1Q05682 Y_RNA.490-201ENST00000384413 102 ntBASIC1.75□□□□□ -2.13
CALD1Q05682 MIR758-201ENST00000390227 88 ntBASIC1.75□□□□□ -2.13
CALD1Q05682 RNA5SP323-201ENST00000391094 133 ntBASIC1.75□□□□□ -2.13
CALD1Q05682 Y_RNA.619-201ENST00000410951 90 ntBASIC1.75□□□□□ -2.13
CALD1Q05682 SDAD1P3-201ENST00000427380 333 ntBASIC1.75□□□□□ -2.13
CALD1Q05682 USP9YP16-201ENST00000430287 407 ntBASIC1.75□□□□□ -2.13
CALD1Q05682 AL353997.1-201ENST00000432936 108 ntBASIC1.75□□□□□ -2.13
CALD1Q05682 USP9YP23-201ENST00000455085 407 ntBASIC1.75□□□□□ -2.13
CALD1Q05682 RNA5SP61-201ENST00000516453 100 ntBASIC1.75□□□□□ -2.13
CALD1Q05682 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.75□□□□□ -2.13
CALD1Q05682 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
CALD1Q05682 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CALD1Q05682 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.74□□□□□ -2.13
CALD1Q05682 MIR1185-2-201ENST00000408687 86 ntBASIC1.74□□□□□ -2.13
CALD1Q05682 RNU6-1050P-201ENST00000410388 107 ntBASIC1.74□□□□□ -2.13
CALD1Q05682 AC074085.1-201ENST00000413598 418 ntBASIC1.74□□□□□ -2.13
CALD1Q05682 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.74□□□□□ -2.13
CALD1Q05682 AC107399.1-201ENST00000451226 265 ntBASIC1.74□□□□□ -2.13
CALD1Q05682 RNU1-123P-201ENST00000458950 160 ntBASIC1.74□□□□□ -2.13
CALD1Q05682 snoU13.27-201ENST00000459278 104 ntBASIC1.74□□□□□ -2.13
CALD1Q05682 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.74□□□□□ -2.13
CALD1Q05682 AC093303.1-201ENST00000514549 295 ntBASIC1.74□□□□□ -2.13
CALD1Q05682 RNU6-1114P-201ENST00000516022 107 ntBASIC1.74□□□□□ -2.13
CALD1Q05682 AC008269.2-201ENST00000561915 1105 ntBASIC1.74□□□□□ -2.13
CALD1Q05682 AC009229.3-201ENST00000608056 282 ntBASIC1.74□□□□□ -2.13
CALD1Q05682 AC010999.1-201ENST00000611856 324 ntBASIC1.74□□□□□ -2.13
CALD1Q05682 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.74□□□□□ -2.13
CALD1Q05682 Y_RNA.72-201ENST00000362894 103 ntBASIC1.73□□□□□ -2.13
CALD1Q05682 RNU6-271P-201ENST00000363858 105 ntBASIC1.73□□□□□ -2.13
CALD1Q05682 RNU6-601P-201ENST00000384540 107 ntBASIC1.73□□□□□ -2.13
CALD1Q05682 MIR515-2-201ENST00000384883 83 ntBASIC1.73□□□□□ -2.13
CALD1Q05682 MIR515-1-201ENST00000384884 83 ntBASIC1.73□□□□□ -2.13
CALD1Q05682 RNA5SP109-201ENST00000391010 116 ntBASIC1.73□□□□□ -2.13
CALD1Q05682 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.73□□□□□ -2.13
CALD1Q05682 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.73□□□□□ -2.13
CALD1Q05682 AC005002.2-201ENST00000438228 269 ntBASIC1.73□□□□□ -2.13
CALD1Q05682 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.73□□□□□ -2.13
CALD1Q05682 FGF7P6-202ENST00000451282 293 ntBASIC1.73□□□□□ -2.13
CALD1Q05682 RPL7P42-201ENST00000481005 679 ntBASIC1.73□□□□□ -2.13
CALD1Q05682 AL163195.1-201ENST00000496941 348 ntBASIC1.73□□□□□ -2.13
CALD1Q05682 AC091144.1-201ENST00000519573 138 ntBASIC1.73□□□□□ -2.13
CALD1Q05682 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.73□□□□□ -2.13
CALD1Q05682 AC093023.1-201ENST00000547375 507 ntBASIC1.73□□□□□ -2.13
CALD1Q05682 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.73□□□□□ -2.13
CALD1Q05682 FRG2DP-202ENST00000566967 323 ntBASIC1.73□□□□□ -2.13
CALD1Q05682 PRR13P7-201ENST00000605538 430 ntBASIC1.73□□□□□ -2.13
CALD1Q05682 snoU13.31-201ENST00000607291 104 ntBASIC1.73□□□□□ -2.13
CALD1Q05682 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.73□□□□□ -2.13
CALD1Q05682 MTND5P16-201ENST00000460269 1703 ntBASIC1.73□□□□□ -2.13
CALD1Q05682 ICE2P2-201ENST00000483823 2787 ntBASIC1.73□□□□□ -2.13
CALD1Q05682 CASC19-280ENST00000642102 1351 ntBASIC1.72□□□□□ -2.13
CALD1Q05682 MTND5P35-201ENST00000557537 1720 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms