Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.4□□□□□ -2.19
CSTF1Q05048 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.4□□□□□ -2.19
CSTF1Q05048 AC084364.2-201ENST00000546924 395 ntBASIC1.4□□□□□ -2.19
CSTF1Q05048 AC026470.2-201ENST00000561492 181 ntBASIC1.4□□□□□ -2.19
CSTF1Q05048 FAM106DP-201ENST00000586416 501 ntBASIC1.4□□□□□ -2.19
CSTF1Q05048 SNRPGP20-201ENST00000604477 205 ntBASIC1.4□□□□□ -2.19
CSTF1Q05048 AC080078.3-201ENST00000605407 463 ntBASIC1.4□□□□□ -2.19
CSTF1Q05048 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.4□□□□□ -2.19
CSTF1Q05048 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.4□□□□□ -2.19
CSTF1Q05048 AC099654.14-201ENST00000638599 341 ntBASIC1.4□□□□□ -2.19
CSTF1Q05048 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.39□□□□□ -2.19
CSTF1Q05048 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.39□□□□□ -2.19
CSTF1Q05048 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CSTF1Q05048 SNORD50.1-201ENST00000362987 71 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 Y_RNA.339-201ENST00000365325 102 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 Y_RNA.354-201ENST00000365448 111 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 RNU6-842P-201ENST00000384269 107 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 Y_RNA.573-201ENST00000384763 105 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 MIR320A-201ENST00000385302 82 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 MIR1253-201ENST00000408273 105 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 MIR548F5-201ENST00000408421 86 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 MIR320B2-201ENST00000408479 138 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 RNU6-955P-201ENST00000410497 104 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 RNU6-373P-201ENST00000411247 98 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 RNU6-57P-201ENST00000411348 103 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 AL445305.1-201ENST00000432577 575 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 RPS3AP52-201ENST00000435639 297 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 HMGN2P34-201ENST00000437647 269 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 MTND1P17-201ENST00000448961 204 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 OR2AQ1P-201ENST00000451972 200 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 PCMTD1P1-201ENST00000455560 355 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 AC114982.1-201ENST00000469402 321 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 FO393415.2-201ENST00000480085 343 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 AC103851.1-201ENST00000506833 274 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 RNU6-948P-201ENST00000516374 107 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 RNU6-566P-201ENST00000516790 107 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 RNU7-30P-201ENST00000516835 62 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 RNU6-856P-201ENST00000516959 98 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 RNU6-1213P-201ENST00000517075 94 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 AL133215.3-201ENST00000609801 448 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 AC137590.2-201ENST00000619709 240 ntBASIC1.39□□□□□ -2.19
CSTF1Q05048 AP000648.3-201ENST00000623539 4507 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 ICE2P2-201ENST00000483823 2787 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 BX322639.1-202ENST00000423987 2213 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 Y_RNA.88-201ENST00000363029 99 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 RNU6-1019P-201ENST00000364424 107 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 RNU6-342P-201ENST00000384521 104 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 MIR598-201ENST00000384868 97 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 MIR517A-201ENST00000385001 87 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 RNU1-78P-201ENST00000391248 165 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 RNA5SP118-201ENST00000410385 109 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 AC004866.1-201ENST00000411748 78 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 MTND3P8-201ENST00000412909 339 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 MTCO3P29-201ENST00000432119 779 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 AC245047.4-201ENST00000433189 144 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 AC073910.1-201ENST00000445047 438 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.38□□□□□ -2.19
CSTF1Q05048 RPL23AP75-201ENST00000491601 451 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 AC091951.2-201ENST00000500762 203 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 MTND5P5-201ENST00000503764 376 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 RNU6-120P-201ENST00000516077 103 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 RNU6-1223P-201ENST00000517124 104 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 RNA5SP454-201ENST00000517231 127 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 AC019176.1-201ENST00000518519 225 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.38□□□□□ -2.19
CSTF1Q05048 AC100830.2-201ENST00000581636 240 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 POLR3GP2-201ENST00000588366 668 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 AC009033.1-201ENST00000624279 431 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 SCARNA4-201ENST00000629045 128 ntBASIC1.38□□□□□ -2.19
CSTF1Q05048 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CSTF1Q05048 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
CSTF1Q05048 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CSTF1Q05048 RNU6-845P-201ENST00000362578 103 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 Y_RNA.474-201ENST00000384341 102 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 RNU6-417P-201ENST00000384712 107 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 MIR32-201ENST00000384965 70 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CSTF1Q05048 MIR548K-201ENST00000408406 116 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 USP9YP30-201ENST00000430729 455 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 Z82188.1-201ENST00000436709 154 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 AL135790.2-201ENST00000437701 267 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 MTATP6P23-201ENST00000440153 476 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 AC009237.7-201ENST00000447357 229 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 AC074290.1-201ENST00000448883 135 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.37□□□□□ -2.19
CSTF1Q05048 AC079354.2-201ENST00000453523 154 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 RNU7-57P-201ENST00000459540 60 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 HMGN2P9-201ENST00000476875 229 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.37□□□□□ -2.19
CSTF1Q05048 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.37□□□□□ -2.19
CSTF1Q05048 AC067942.3-201ENST00000512025 362 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 AC005730.3-201ENST00000583067 366 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.37□□□□□ -2.19
CSTF1Q05048 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 AC022306.2-201ENST00000617563 647 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 AL359697.1-201ENST00000624879 587 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 AC099654.5-201ENST00000636479 350 ntBASIC1.37□□□□□ -2.19
CSTF1Q05048 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms