Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 MIR559-201ENST00000385188 96 ntBASIC1.93□□□□□ -2.1
PRAMEP78395 RNU2-2P-201ENST00000410396 191 ntBASIC1.93□□□□□ -2.1
PRAMEP78395 Y_RNA.605-201ENST00000410577 105 ntBASIC1.93□□□□□ -2.1
PRAMEP78395 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.93□□□□□ -2.1
PRAMEP78395 MIR4648-201ENST00000580107 72 ntBASIC1.93□□□□□ -2.1
PRAMEP78395 SNRPGP19-201ENST00000603826 189 ntBASIC1.93□□□□□ -2.1
PRAMEP78395 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.93□□□□□ -2.1
PRAMEP78395 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
PRAMEP78395 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PRAMEP78395 RNU6-112P-201ENST00000363599 104 ntBASIC1.92□□□□□ -2.1
PRAMEP78395 Y_RNA.287-201ENST00000364853 94 ntBASIC1.92□□□□□ -2.1
PRAMEP78395 RNU6-1240P-201ENST00000365155 104 ntBASIC1.92□□□□□ -2.1
PRAMEP78395 RNU6-1040P-201ENST00000383974 107 ntBASIC1.92□□□□□ -2.1
PRAMEP78395 SUMO2P12-201ENST00000405924 140 ntBASIC1.92□□□□□ -2.1
PRAMEP78395 Y_RNA.592-201ENST00000410274 109 ntBASIC1.92□□□□□ -2.1
PRAMEP78395 AC008134.1-201ENST00000420943 193 ntBASIC1.92□□□□□ -2.1
PRAMEP78395 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.92□□□□□ -2.1
PRAMEP78395 AC096644.2-201ENST00000429278 159 ntBASIC1.92□□□□□ -2.1
PRAMEP78395 AC236972.2-201ENST00000434979 310 ntBASIC1.92□□□□□ -2.1
PRAMEP78395 NDUFB4P10-201ENST00000452541 359 ntBASIC1.92□□□□□ -2.1
PRAMEP78395 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.92□□□□□ -2.1
PRAMEP78395 TRBV12-1-201ENST00000479785 344 ntBASIC1.92□□□□□ -2.1
PRAMEP78395 SNORA31.17-201ENST00000516953 127 ntBASIC1.92□□□□□ -2.1
PRAMEP78395 AC084364.2-201ENST00000546924 395 ntBASIC1.92□□□□□ -2.1
PRAMEP78395 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.92□□□□□ -2.1
PRAMEP78395 MIR4298-201ENST00000584380 73 ntBASIC1.92□□□□□ -2.1
PRAMEP78395 AC069114.2-201ENST00000604699 304 ntBASIC1.92□□□□□ -2.1
PRAMEP78395 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
PRAMEP78395 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
PRAMEP78395 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PRAMEP78395 RNU6-1301P-201ENST00000362724 104 ntBASIC1.91□□□□□ -2.1
PRAMEP78395 RNU6-490P-201ENST00000362985 107 ntBASIC1.91□□□□□ -2.1
PRAMEP78395 Y_RNA.146-201ENST00000363549 102 ntBASIC1.91□□□□□ -2.1
PRAMEP78395 Y_RNA.187-201ENST00000363918 113 ntBASIC1.91□□□□□ -2.1
PRAMEP78395 Y_RNA.498-201ENST00000384460 102 ntBASIC1.91□□□□□ -2.1
PRAMEP78395 RNA5SP467-201ENST00000391274 118 ntBASIC1.91□□□□□ -2.1
PRAMEP78395 RNU2-20P-201ENST00000410425 191 ntBASIC1.91□□□□□ -2.1
PRAMEP78395 ELOCP21-201ENST00000412558 336 ntBASIC1.91□□□□□ -2.1
PRAMEP78395 AC009310.1-201ENST00000414414 451 ntBASIC1.91□□□□□ -2.1
PRAMEP78395 PCNPP5-201ENST00000452246 481 ntBASIC1.91□□□□□ -2.1
PRAMEP78395 RNU6-1146P-201ENST00000516282 102 ntBASIC1.91□□□□□ -2.1
PRAMEP78395 RN7SKP49-201ENST00000516675 260 ntBASIC1.91□□□□□ -2.1
PRAMEP78395 RNU7-4P-201ENST00000516961 62 ntBASIC1.91□□□□□ -2.1
PRAMEP78395 AC144568.1-201ENST00000520139 137 ntBASIC1.91□□□□□ -2.1
PRAMEP78395 AC027419.1-201ENST00000522976 328 ntBASIC1.91□□□□□ -2.1
PRAMEP78395 RAB11AP2-201ENST00000545905 639 ntBASIC1.91□□□□□ -2.1
PRAMEP78395 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.91□□□□□ -2.1
PRAMEP78395 MTND5P10-201ENST00000603719 1809 ntBASIC1.91□□□□□ -2.1
PRAMEP78395 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
PRAMEP78395 RNU6-926P-201ENST00000384075 107 ntBASIC1.9□□□□□ -2.11
PRAMEP78395 SNORD12B-201ENST00000410433 91 ntBASIC1.9□□□□□ -2.11
PRAMEP78395 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.9□□□□□ -2.11
PRAMEP78395 CST2P1-201ENST00000425770 87 ntBASIC1.9□□□□□ -2.11
PRAMEP78395 MTND4P28-201ENST00000426217 387 ntBASIC1.9□□□□□ -2.11
PRAMEP78395 AC245047.4-201ENST00000433189 144 ntBASIC1.9□□□□□ -2.11
PRAMEP78395 AC022254.1-201ENST00000567857 235 ntBASIC1.9□□□□□ -2.11
PRAMEP78395 MIR4713-201ENST00000582691 75 ntBASIC1.9□□□□□ -2.11
PRAMEP78395 AC080078.3-201ENST00000605407 463 ntBASIC1.9□□□□□ -2.11
PRAMEP78395 AL353149.1-201ENST00000610667 244 ntBASIC1.9□□□□□ -2.11
PRAMEP78395 AC010615.1-201ENST00000594254 1764 ntBASIC1.9□□□□□ -2.11
PRAMEP78395 ZNF72P-201ENST00000425869 1908 ntBASIC1.89□□□□□ -2.11
PRAMEP78395 RNU6-296P-201ENST00000384608 107 ntBASIC1.89□□□□□ -2.11
PRAMEP78395 MT-TD-201ENST00000387419 68 ntBASIC1.89□□□□□ -2.11
PRAMEP78395 AC019129.1-201ENST00000403786 261 ntBASIC1.89□□□□□ -2.11
PRAMEP78395 RNU2-7P-201ENST00000410794 178 ntBASIC1.89□□□□□ -2.11
PRAMEP78395 RNA5SP489-201ENST00000410986 109 ntBASIC1.89□□□□□ -2.11
PRAMEP78395 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.89□□□□□ -2.11
PRAMEP78395 AC092473.1-201ENST00000441098 221 ntBASIC1.89□□□□□ -2.11
PRAMEP78395 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.89□□□□□ -2.11
PRAMEP78395 SNORA40.9-201ENST00000515895 93 ntBASIC1.89□□□□□ -2.11
PRAMEP78395 CYCSP23-201ENST00000519781 313 ntBASIC1.89□□□□□ -2.11
PRAMEP78395 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PRAMEP78395 AC018448.1-201ENST00000552843 316 ntBASIC1.89□□□□□ -2.11
PRAMEP78395 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.89□□□□□ -2.11
PRAMEP78395 AC010900.2-201ENST00000604508 210 ntBASIC1.89□□□□□ -2.11
PRAMEP78395 LARP7P1-201ENST00000605576 316 ntBASIC1.89□□□□□ -2.11
PRAMEP78395 AL008636.1-201ENST00000625038 1018 ntBASIC1.89□□□□□ -2.11
PRAMEP78395 AC092881.1-201ENST00000638218 2733 ntBASIC1.88□□□□□ -2.11
PRAMEP78395 RNU4-79P-201ENST00000362764 141 ntBASIC1.88□□□□□ -2.11
PRAMEP78395 RNU6-1266P-201ENST00000362794 105 ntBASIC1.88□□□□□ -2.11
PRAMEP78395 RNU6-1019P-201ENST00000364424 107 ntBASIC1.88□□□□□ -2.11
PRAMEP78395 RNU6-867P-201ENST00000364956 107 ntBASIC1.88□□□□□ -2.11
PRAMEP78395 RNU6-439P-201ENST00000384188 106 ntBASIC1.88□□□□□ -2.11
PRAMEP78395 SNORA70B-201ENST00000384210 135 ntBASIC1.88□□□□□ -2.11
PRAMEP78395 Y_RNA.463-201ENST00000384271 102 ntBASIC1.88□□□□□ -2.11
PRAMEP78395 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
PRAMEP78395 RNA5SP323-201ENST00000391094 133 ntBASIC1.88□□□□□ -2.11
PRAMEP78395 AL445685.2-201ENST00000422551 342 ntBASIC1.88□□□□□ -2.11
PRAMEP78395 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.88□□□□□ -2.11
PRAMEP78395 RNU7-152P-201ENST00000458982 64 ntBASIC1.88□□□□□ -2.11
PRAMEP78395 RN7SL429P-201ENST00000479090 223 ntBASIC1.88□□□□□ -2.11
PRAMEP78395 RN7SL489P-201ENST00000486185 223 ntBASIC1.88□□□□□ -2.11
PRAMEP78395 RN7SL327P-201ENST00000488659 223 ntBASIC1.88□□□□□ -2.11
PRAMEP78395 RPL23AP63-201ENST00000498752 471 ntBASIC1.88□□□□□ -2.11
PRAMEP78395 Y_RNA.661-201ENST00000516003 99 ntBASIC1.88□□□□□ -2.11
PRAMEP78395 MIR2355-201ENST00000517199 87 ntBASIC1.88□□□□□ -2.11
PRAMEP78395 GNAI2P1-201ENST00000541815 315 ntBASIC1.88□□□□□ -2.11
PRAMEP78395 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.88□□□□□ -2.11
PRAMEP78395 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.88□□□□□ -2.11
PRAMEP78395 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms