Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.05
SEC61A1P61619 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SEC61A1P61619 MIR335-201ENST00000362173 94 ntBASIC2.21□□□□□ -2.06
SEC61A1P61619 RNU6-1266P-201ENST00000362794 105 ntBASIC2.21□□□□□ -2.06
SEC61A1P61619 SNORD32B-201ENST00000364460 84 ntBASIC2.21□□□□□ -2.06
SEC61A1P61619 Y_RNA.569-201ENST00000384749 103 ntBASIC2.21□□□□□ -2.06
SEC61A1P61619 MIR548H3-201ENST00000408771 118 ntBASIC2.21□□□□□ -2.06
SEC61A1P61619 AC009237.7-201ENST00000447357 229 ntBASIC2.21□□□□□ -2.06
SEC61A1P61619 RNU6-965P-201ENST00000516721 96 ntBASIC2.21□□□□□ -2.06
SEC61A1P61619 RNU6-1098P-201ENST00000516772 96 ntBASIC2.21□□□□□ -2.06
SEC61A1P61619 RNU6-586P-201ENST00000517265 104 ntBASIC2.21□□□□□ -2.06
SEC61A1P61619 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.21□□□□□ -2.06
SEC61A1P61619 PRELID2P1-201ENST00000552837 301 ntBASIC2.21□□□□□ -2.06
SEC61A1P61619 AC026470.2-201ENST00000561492 181 ntBASIC2.21□□□□□ -2.06
SEC61A1P61619 AL109918.3-201ENST00000603072 338 ntBASIC2.21□□□□□ -2.06
SEC61A1P61619 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.21□□□□□ -2.06
SEC61A1P61619 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SEC61A1P61619 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SEC61A1P61619 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SEC61A1P61619 Y_RNA.383-201ENST00000383855 97 ntBASIC2.2□□□□□ -2.06
SEC61A1P61619 AC003685.2-201ENST00000422795 395 ntBASIC2.2□□□□□ -2.06
SEC61A1P61619 AC074133.1-201ENST00000515696 183 ntBASIC2.2□□□□□ -2.06
SEC61A1P61619 RPL21P9-201ENST00000556149 474 ntBASIC2.2□□□□□ -2.06
SEC61A1P61619 MIR4658-201ENST00000584344 65 ntBASIC2.2□□□□□ -2.06
SEC61A1P61619 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.2□□□□□ -2.06
SEC61A1P61619 AC022441.3-201ENST00000605737 136 ntBASIC2.2□□□□□ -2.06
SEC61A1P61619 SNORD11B-201ENST00000607707 90 ntBASIC2.2□□□□□ -2.06
SEC61A1P61619 MIR3674-201ENST00000636576 68 ntBASIC2.2□□□□□ -2.06
SEC61A1P61619 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SEC61A1P61619 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SEC61A1P61619 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 Y_RNA.20-201ENST00000362479 113 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 RNU6-545P-201ENST00000362681 104 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 Y_RNA.230-201ENST00000364348 109 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 Y_RNA.269-201ENST00000364685 89 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 Y_RNA.352-201ENST00000365439 102 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 Y_RNA.418-201ENST00000384029 102 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 MIR29B2-201ENST00000385055 81 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 SNORA53-201ENST00000391141 249 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 RNA5SP475-201ENST00000410568 110 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 RNU6-651P-201ENST00000411040 105 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 RNU2-14P-201ENST00000411053 191 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 POLR2KP2-201ENST00000438155 177 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.19□□□□□ -2.06
SEC61A1P61619 RPS23P5-201ENST00000495419 428 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 CKS1BP2-201ENST00000497342 240 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.19□□□□□ -2.06
SEC61A1P61619 AC096725.1-201ENST00000514266 313 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 RNU6-155P-201ENST00000516347 100 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 RNU5F-4P-201ENST00000516581 114 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 RNU2-31P-201ENST00000516954 155 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 CYCSP23-201ENST00000519781 313 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.19□□□□□ -2.06
SEC61A1P61619 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.19□□□□□ -2.06
SEC61A1P61619 MIR3616-201ENST00000584070 92 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 AC141273.2-201ENST00000618989 130 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 MIR5739-201ENST00000619803 80 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 AC127459.3-201ENST00000624328 466 ntBASIC2.19□□□□□ -2.06
SEC61A1P61619 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.18□□□□□ -2.06
SEC61A1P61619 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.18□□□□□ -2.06
SEC61A1P61619 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SEC61A1P61619 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SEC61A1P61619 RNU6-454P-201ENST00000364292 107 ntBASIC2.18□□□□□ -2.06
SEC61A1P61619 RNU6-1305P-201ENST00000364353 104 ntBASIC2.18□□□□□ -2.06
SEC61A1P61619 Y_RNA.478-201ENST00000384358 107 ntBASIC2.18□□□□□ -2.06
SEC61A1P61619 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SEC61A1P61619 RNU6-1199P-201ENST00000411249 104 ntBASIC2.18□□□□□ -2.06
SEC61A1P61619 RPL23AP36-201ENST00000413895 458 ntBASIC2.18□□□□□ -2.06
SEC61A1P61619 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
SEC61A1P61619 AL161788.1-201ENST00000441805 169 ntBASIC2.18□□□□□ -2.06
SEC61A1P61619 EEF1B2P7-201ENST00000451177 676 ntBASIC2.18□□□□□ -2.06
SEC61A1P61619 AC005042.3-201ENST00000453230 174 ntBASIC2.18□□□□□ -2.06
SEC61A1P61619 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.18□□□□□ -2.06
SEC61A1P61619 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.18□□□□□ -2.06
SEC61A1P61619 RNU6-344P-201ENST00000516635 111 ntBASIC2.18□□□□□ -2.06
SEC61A1P61619 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.18□□□□□ -2.06
SEC61A1P61619 MIR4513-201ENST00000581077 86 ntBASIC2.18□□□□□ -2.06
SEC61A1P61619 MIR6817-201ENST00000615588 66 ntBASIC2.18□□□□□ -2.06
SEC61A1P61619 U2.14-201ENST00000615943 113 ntBASIC2.18□□□□□ -2.06
SEC61A1P61619 AC068205.3-201ENST00000636385 468 ntBASIC2.18□□□□□ -2.06
SEC61A1P61619 AC005336.3-201ENST00000623833 2679 ntBASIC2.18□□□□□ -2.06
SEC61A1P61619 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SEC61A1P61619 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.18□□□□□ -2.06
SEC61A1P61619 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.17□□□□□ -2.06
SEC61A1P61619 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.17□□□□□ -2.06
SEC61A1P61619 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SEC61A1P61619 SNORA25.1-201ENST00000362326 128 ntBASIC2.17□□□□□ -2.06
SEC61A1P61619 Y_RNA.44-201ENST00000362676 108 ntBASIC2.17□□□□□ -2.06
SEC61A1P61619 Y_RNA.117-201ENST00000363294 101 ntBASIC2.17□□□□□ -2.06
SEC61A1P61619 RNA5SP68-201ENST00000363885 119 ntBASIC2.17□□□□□ -2.06
SEC61A1P61619 SNORA67.2-201ENST00000384300 149 ntBASIC2.17□□□□□ -2.06
SEC61A1P61619 Y_RNA.515-201ENST00000384535 112 ntBASIC2.17□□□□□ -2.06
SEC61A1P61619 MIR144-201ENST00000384886 86 ntBASIC2.17□□□□□ -2.06
SEC61A1P61619 MIR548B-201ENST00000385247 97 ntBASIC2.17□□□□□ -2.06
SEC61A1P61619 MIR1294-201ENST00000408503 142 ntBASIC2.17□□□□□ -2.06
SEC61A1P61619 MTCO1P5-201ENST00000433573 344 ntBASIC2.17□□□□□ -2.06
SEC61A1P61619 MTND5P15-201ENST00000434246 349 ntBASIC2.17□□□□□ -2.06
SEC61A1P61619 Z98949.2-201ENST00000440996 144 ntBASIC2.17□□□□□ -2.06
SEC61A1P61619 RNU7-14P-201ENST00000459331 62 ntBASIC2.17□□□□□ -2.06
SEC61A1P61619 ATP5EP1-201ENST00000510257 156 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms