Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC004832.4-201ENST00000608952 331 ntBASIC0.46□□□□□ -2.34
ACTBP60709 AC087683.2-201ENST00000611384 326 ntBASIC0.46□□□□□ -2.34
ACTBP60709 AC103705.1-201ENST00000619013 241 ntBASIC0.46□□□□□ -2.34
ACTBP60709 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.46□□□□□ -2.34
ACTBP60709 CASC19-280ENST00000642102 1351 ntBASIC0.45□□□□□ -2.34
ACTBP60709 Y_RNA.112-201ENST00000363250 102 ntBASIC0.45□□□□□ -2.34
ACTBP60709 U3.8-201ENST00000363675 217 ntBASIC0.45□□□□□ -2.34
ACTBP60709 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.45□□□□□ -2.34
ACTBP60709 SNORD116-13-201ENST00000384408 92 ntBASIC0.45□□□□□ -2.34
ACTBP60709 RNU1-139P-201ENST00000391307 165 ntBASIC0.45□□□□□ -2.34
ACTBP60709 MTND2P18-201ENST00000419962 1030 ntBASIC0.45□□□□□ -2.34
ACTBP60709 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.45□□□□□ -2.34
ACTBP60709 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.45□□□□□ -2.34
ACTBP60709 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.45□□□□□ -2.34
ACTBP60709 AL031667.1-201ENST00000440222 725 ntBASIC0.45□□□□□ -2.34
ACTBP60709 RPL39P39-201ENST00000455840 151 ntBASIC0.45□□□□□ -2.34
ACTBP60709 AL049830.1-201ENST00000468034 425 ntBASIC0.45□□□□□ -2.34
ACTBP60709 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.45□□□□□ -2.34
ACTBP60709 AC022493.2-201ENST00000506122 481 ntBASIC0.45□□□□□ -2.34
ACTBP60709 RNA5SP54-201ENST00000516951 92 ntBASIC0.45□□□□□ -2.34
ACTBP60709 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.45□□□□□ -2.34
ACTBP60709 AP002001.1-203ENST00000534002 267 ntBASIC0.45□□□□□ -2.34
ACTBP60709 MIR3915-201ENST00000578518 97 ntBASIC0.45□□□□□ -2.34
ACTBP60709 Z83818.1-201ENST00000603584 150 ntBASIC0.45□□□□□ -2.34
ACTBP60709 SNORA28-201ENST00000606769 126 ntBASIC0.45□□□□□ -2.34
ACTBP60709 AL360219.1-201ENST00000610230 366 ntBASIC0.45□□□□□ -2.34
ACTBP60709 MIR8076-201ENST00000611401 83 ntBASIC0.45□□□□□ -2.34
ACTBP60709 AC068787.1-201ENST00000623908 691 ntBASIC0.45□□□□□ -2.34
ACTBP60709 AL442644.1-201ENST00000454390 3105 ntBASIC0.44□□□□□ -2.34
ACTBP60709 SNORD18A-201ENST00000363753 72 ntBASIC0.44□□□□□ -2.34
ACTBP60709 RNU6-82P-201ENST00000363970 107 ntBASIC0.44□□□□□ -2.34
ACTBP60709 RNU6-996P-201ENST00000365438 107 ntBASIC0.44□□□□□ -2.34
ACTBP60709 RNU6-1105P-201ENST00000384774 107 ntBASIC0.44□□□□□ -2.34
ACTBP60709 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.44□□□□□ -2.34
ACTBP60709 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.44□□□□□ -2.34
ACTBP60709 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.44□□□□□ -2.34
ACTBP60709 CALM2P4-201ENST00000430810 426 ntBASIC0.44□□□□□ -2.34
ACTBP60709 FABP5P4-201ENST00000437203 171 ntBASIC0.44□□□□□ -2.34
ACTBP60709 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.44□□□□□ -2.34
ACTBP60709 STAG3L5P-204ENST00000443759 179 ntBASIC0.44□□□□□ -2.34
ACTBP60709 AC245047.8-201ENST00000456455 284 ntBASIC0.44□□□□□ -2.34
ACTBP60709 snoU13.25-201ENST00000458945 104 ntBASIC0.44□□□□□ -2.34
ACTBP60709 RNU7-63P-201ENST00000459054 62 ntBASIC0.44□□□□□ -2.34
ACTBP60709 RPL23AP75-201ENST00000491601 451 ntBASIC0.44□□□□□ -2.34
ACTBP60709 RNU6-189P-201ENST00000516120 101 ntBASIC0.44□□□□□ -2.34
ACTBP60709 RNU6-947P-201ENST00000516264 106 ntBASIC0.44□□□□□ -2.34
ACTBP60709 RNU6-405P-201ENST00000516637 110 ntBASIC0.44□□□□□ -2.34
ACTBP60709 RNU1-117P-201ENST00000517041 158 ntBASIC0.44□□□□□ -2.34
ACTBP60709 AC060788.1-201ENST00000521318 469 ntBASIC0.44□□□□□ -2.34
ACTBP60709 AC104576.1-201ENST00000524225 88 ntBASIC0.44□□□□□ -2.34
ACTBP60709 MTND1P35-201ENST00000526739 508 ntBASIC0.44□□□□□ -2.34
ACTBP60709 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
ACTBP60709 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.44□□□□□ -2.34
ACTBP60709 AC008536.2-201ENST00000607284 349 ntBASIC0.44□□□□□ -2.34
ACTBP60709 AL391903.3-201ENST00000612158 163 ntBASIC0.44□□□□□ -2.34
ACTBP60709 PVT1_3.1-201ENST00000620853 95 ntBASIC0.44□□□□□ -2.34
ACTBP60709 MIR6513-201ENST00000621188 64 ntBASIC0.44□□□□□ -2.34
ACTBP60709 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
ACTBP60709 AL390237.1-201ENST00000404226 1415 ntBASIC0.44□□□□□ -2.34
ACTBP60709 RNU4-12P-201ENST00000365233 139 ntBASIC0.43□□□□□ -2.34
ACTBP60709 RNU6-342P-201ENST00000384521 104 ntBASIC0.43□□□□□ -2.34
ACTBP60709 MIR216A-201ENST00000385063 110 ntBASIC0.43□□□□□ -2.34
ACTBP60709 U8.16-201ENST00000391279 133 ntBASIC0.43□□□□□ -2.34
ACTBP60709 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.43□□□□□ -2.34
ACTBP60709 MTND4LP16-201ENST00000440828 295 ntBASIC0.43□□□□□ -2.34
ACTBP60709 RPEP5-201ENST00000441137 268 ntBASIC0.43□□□□□ -2.34
ACTBP60709 USP9YP29-201ENST00000445112 563 ntBASIC0.43□□□□□ -2.34
ACTBP60709 AL157398.1-201ENST00000452981 186 ntBASIC0.43□□□□□ -2.34
ACTBP60709 TPT1P7-201ENST00000458300 517 ntBASIC0.43□□□□□ -2.34
ACTBP60709 OR9P1P-201ENST00000496431 281 ntBASIC0.43□□□□□ -2.34
ACTBP60709 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.43□□□□□ -2.34
ACTBP60709 AC113410.1-201ENST00000505029 247 ntBASIC0.43□□□□□ -2.34
ACTBP60709 RNA5SP436-201ENST00000516020 115 ntBASIC0.43□□□□□ -2.34
ACTBP60709 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.43□□□□□ -2.34
ACTBP60709 MIR3913-1-201ENST00000577744 102 ntBASIC0.43□□□□□ -2.34
ACTBP60709 MTND1P15-201ENST00000579262 949 ntBASIC0.43□□□□□ -2.34
ACTBP60709 AC087683.1-201ENST00000591187 441 ntBASIC0.43□□□□□ -2.34
ACTBP60709 AC017083.3-201ENST00000609955 700 ntBASIC0.43□□□□□ -2.34
ACTBP60709 AC109347.2-201ENST00000610220 349 ntBASIC0.43□□□□□ -2.34
ACTBP60709 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.43□□□□□ -2.34
ACTBP60709 AC023934.1-201ENST00000574529 2389 ntBASIC0.43□□□□□ -2.34
ACTBP60709 RNY3P10-201ENST00000384764 102 ntBASIC0.42□□□□□ -2.34
ACTBP60709 RNU6-325P-201ENST00000411132 105 ntBASIC0.42□□□□□ -2.34
ACTBP60709 AL365203.2-201ENST00000423444 196 ntBASIC0.42□□□□□ -2.34
ACTBP60709 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.42□□□□□ -2.34
ACTBP60709 AC091133.4-201ENST00000511142 308 ntBASIC0.42□□□□□ -2.34
ACTBP60709 RNA5SP480-201ENST00000516840 109 ntBASIC0.42□□□□□ -2.34
ACTBP60709 MTCO2P4-201ENST00000517968 247 ntBASIC0.42□□□□□ -2.34
ACTBP60709 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.42□□□□□ -2.34
ACTBP60709 AL157687.1-201ENST00000554853 619 ntBASIC0.42□□□□□ -2.34
ACTBP60709 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.42□□□□□ -2.34
ACTBP60709 AC012557.2-201ENST00000605919 418 ntBASIC0.42□□□□□ -2.34
ACTBP60709 AC027449.1-201ENST00000608890 407 ntBASIC0.42□□□□□ -2.34
ACTBP60709 AL096861.1-201ENST00000610899 123 ntBASIC0.42□□□□□ -2.34
ACTBP60709 AC072046.2-201ENST00000618366 268 ntBASIC0.42□□□□□ -2.34
ACTBP60709 AC022960.3-201ENST00000619794 441 ntBASIC0.42□□□□□ -2.34
ACTBP60709 ELL2P3-201ENST00000457883 1602 ntBASIC0.42□□□□□ -2.34
ACTBP60709 Y_RNA.36-201ENST00000362602 112 ntBASIC0.41□□□□□ -2.34
ACTBP60709 Y_RNA.100-201ENST00000363141 102 ntBASIC0.41□□□□□ -2.34
ACTBP60709 Y_RNA.201-201ENST00000364052 96 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms