Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CLRN1P58418 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.63□□□□□ -1.99
CLRN1P58418 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.63□□□□□ -1.99
CLRN1P58418 AL355297.2-201ENST00000604792 129 ntBASIC2.63□□□□□ -1.99
CLRN1P58418 AC013412.1-201ENST00000610687 192 ntBASIC2.63□□□□□ -1.99
CLRN1P58418 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.63□□□□□ -1.99
CLRN1P58418 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.63□□□□□ -1.99
CLRN1P58418 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CLRN1P58418 MIR422A-201ENST00000362286 90 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 Y_RNA.124-201ENST00000363339 93 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 RNU6-1048P-201ENST00000364054 107 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 Y_RNA.341-201ENST00000365341 102 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 SNORA9.2-201ENST00000365361 133 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 Y_RNA.368-201ENST00000365547 113 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 SNORA20B-201ENST00000384220 132 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 SNORA54-201ENST00000384281 123 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 MIR483-201ENST00000385070 76 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 AL357139.1-201ENST00000407792 426 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 AC104332.2-201ENST00000429959 156 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 AC244505.4-201ENST00000434905 287 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 AL121890.1-201ENST00000435457 205 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 AC104332.1-201ENST00000440471 797 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.62□□□□□ -1.99
CLRN1P58418 SSXP5-201ENST00000443473 287 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.62□□□□□ -1.99
CLRN1P58418 SNORA70.12-201ENST00000516084 153 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 RNU6-56P-201ENST00000516986 93 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 RN7SKP40-201ENST00000517211 242 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 MIR4308-201ENST00000580634 81 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 MIR3117-201ENST00000584034 78 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 AC072026.1-201ENST00000605023 201 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 YPEL5P2-201ENST00000605553 359 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 AC096577.2-201ENST00000611455 153 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CLRN1P58418 AL035425.3-201ENST00000564206 4996 ntBASIC2.62□□□□□ -1.99
CLRN1P58418 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.62□□□□□ -1.99
CLRN1P58418 AC134026.1-201ENST00000623249 2239 ntBASIC2.61□□□□□ -1.99
CLRN1P58418 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CLRN1P58418 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLRN1P58418 Y_RNA.310-201ENST00000365063 113 ntBASIC2.61□□□□□ -1.99
CLRN1P58418 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.61□□□□□ -1.99
CLRN1P58418 RNU2-48P-201ENST00000410694 191 ntBASIC2.61□□□□□ -1.99
CLRN1P58418 SNORD65B-201ENST00000459126 73 ntBASIC2.61□□□□□ -1.99
CLRN1P58418 AP004217.1-201ENST00000480579 346 ntBASIC2.61□□□□□ -1.99
CLRN1P58418 AC091826.1-201ENST00000514065 313 ntBASIC2.61□□□□□ -1.99
CLRN1P58418 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.61□□□□□ -1.99
CLRN1P58418 AC025754.2-201ENST00000606491 432 ntBASIC2.61□□□□□ -1.99
CLRN1P58418 AL078604.3-201ENST00000615580 211 ntBASIC2.61□□□□□ -1.99
CLRN1P58418 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.61□□□□□ -1.99
CLRN1P58418 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
CLRN1P58418 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLRN1P58418 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLRN1P58418 Y_RNA.172-201ENST00000363765 102 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 Y_RNA.233-201ENST00000364407 101 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 Y_RNA.287-201ENST00000364853 94 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 SNORA72.4-201ENST00000384174 132 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 Y_RNA.456-201ENST00000384232 111 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 RNU6-1235P-201ENST00000384559 107 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 SNORA48.5-201ENST00000391143 135 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 MIR873-201ENST00000401120 77 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 MTCO2P33-201ENST00000402100 465 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.6□□□□□ -1.99
CLRN1P58418 AC003685.2-201ENST00000422795 395 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 MTND2P29-201ENST00000438595 412 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 RPL23AP7-203ENST00000449021 469 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 EEF1B2P7-201ENST00000451177 676 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 RNU6-498P-201ENST00000459468 107 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 AC010531.2-201ENST00000465012 153 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.6□□□□□ -1.99
CLRN1P58418 AC074198.2-201ENST00000508153 258 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 SCGB1D5P-201ENST00000515134 247 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 RNU6-991P-201ENST00000516168 107 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 AC025647.1-201ENST00000517879 253 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 AC027419.1-201ENST00000522976 328 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 MIR5692C2-201ENST00000577959 77 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 MIR5195-201ENST00000583555 115 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 AL162274.2-201ENST00000614406 332 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 AC013791.1-201ENST00000616619 62 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 AC068700.1-201ENST00000565862 3754 ntBASIC2.6□□□□□ -1.99
CLRN1P58418 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.59□□□□□ -1.99
CLRN1P58418 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
CLRN1P58418 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.59□□□□□ -1.99
CLRN1P58418 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLRN1P58418 RNA5SP125-201ENST00000364843 120 ntBASIC2.59□□□□□ -1.99
CLRN1P58418 MIR491-201ENST00000384877 84 ntBASIC2.59□□□□□ -1.99
CLRN1P58418 MIR887-201ENST00000401258 79 ntBASIC2.59□□□□□ -1.99
CLRN1P58418 RN7SKP51-201ENST00000410781 304 ntBASIC2.59□□□□□ -1.99
CLRN1P58418 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.59□□□□□ -1.99
CLRN1P58418 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.59□□□□□ -1.99
CLRN1P58418 AC093259.1-201ENST00000509755 300 ntBASIC2.59□□□□□ -1.99
CLRN1P58418 AC010598.1-201ENST00000510378 103 ntBASIC2.59□□□□□ -1.99
CLRN1P58418 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.59□□□□□ -1.99
CLRN1P58418 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.59□□□□□ -1.99
CLRN1P58418 AC090616.3-201ENST00000582184 217 ntBASIC2.59□□□□□ -1.99
CLRN1P58418 MIR3616-201ENST00000584070 92 ntBASIC2.59□□□□□ -1.99
CLRN1P58418 AC090115.4-201ENST00000609970 188 ntBASIC2.59□□□□□ -1.99
CLRN1P58418 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.59□□□□□ -1.99
CLRN1P58418 MIR3651-201ENST00000630427 90 ntBASIC2.59□□□□□ -1.99
CLRN1P58418 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.59□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 217.7 ms