Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 RNU7-12P-201ENST00000516030 62 ntBASIC0.27□□□□□ -2.37
CLDN12P56749 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
CLDN12P56749 RNU1-117P-201ENST00000517041 158 ntBASIC0.27□□□□□ -2.37
CLDN12P56749 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.27□□□□□ -2.37
CLDN12P56749 MIR6079-201ENST00000635807 62 ntBASIC0.27□□□□□ -2.37
CLDN12P56749 AC068137.4-201ENST00000638485 296 ntBASIC0.27□□□□□ -2.37
CLDN12P56749 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CLDN12P56749 Y_RNA.123-201ENST00000363338 102 ntBASIC0.26□□□□□ -2.37
CLDN12P56749 RNU6-1214P-201ENST00000363650 109 ntBASIC0.26□□□□□ -2.37
CLDN12P56749 RNU6-784P-201ENST00000384330 106 ntBASIC0.26□□□□□ -2.37
CLDN12P56749 RNA5SP482-201ENST00000391269 118 ntBASIC0.26□□□□□ -2.37
CLDN12P56749 RNU1-139P-201ENST00000391307 165 ntBASIC0.26□□□□□ -2.37
CLDN12P56749 MIR936-201ENST00000401264 98 ntBASIC0.26□□□□□ -2.37
CLDN12P56749 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.26□□□□□ -2.37
CLDN12P56749 MTCO2P12-201ENST00000427426 682 ntBASIC0.26□□□□□ -2.37
CLDN12P56749 NDUFA5P4-201ENST00000436704 385 ntBASIC0.26□□□□□ -2.37
CLDN12P56749 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
CLDN12P56749 AC091133.4-201ENST00000511142 308 ntBASIC0.26□□□□□ -2.37
CLDN12P56749 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.26□□□□□ -2.37
CLDN12P56749 SNORA14.1-201ENST00000516113 141 ntBASIC0.26□□□□□ -2.37
CLDN12P56749 RNU6-496P-201ENST00000516145 99 ntBASIC0.26□□□□□ -2.37
CLDN12P56749 AC087854.1-201ENST00000519706 414 ntBASIC0.26□□□□□ -2.37
CLDN12P56749 AP003716.2-201ENST00000528260 108 ntBASIC0.26□□□□□ -2.37
CLDN12P56749 MIR4438-201ENST00000585271 93 ntBASIC0.26□□□□□ -2.37
CLDN12P56749 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.26□□□□□ -2.37
CLDN12P56749 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.26□□□□□ -2.37
CLDN12P56749 AC122133.1-201ENST00000613964 233 ntBASIC0.26□□□□□ -2.37
CLDN12P56749 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.25□□□□□ -2.37
CLDN12P56749 SNORA40.3-201ENST00000390964 122 ntBASIC0.25□□□□□ -2.37
CLDN12P56749 RNA5SP193-201ENST00000410353 107 ntBASIC0.25□□□□□ -2.37
CLDN12P56749 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.25□□□□□ -2.37
CLDN12P56749 AL593851.1-201ENST00000426171 157 ntBASIC0.25□□□□□ -2.37
CLDN12P56749 AL162725.1-201ENST00000435405 301 ntBASIC0.25□□□□□ -2.37
CLDN12P56749 MRPS10P1-201ENST00000448483 130 ntBASIC0.25□□□□□ -2.37
CLDN12P56749 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.25□□□□□ -2.37
CLDN12P56749 AC067940.1-201ENST00000458411 300 ntBASIC0.25□□□□□ -2.37
CLDN12P56749 MTND1P35-201ENST00000526739 508 ntBASIC0.25□□□□□ -2.37
CLDN12P56749 AC109810.1-201ENST00000534066 224 ntBASIC0.25□□□□□ -2.37
CLDN12P56749 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.25□□□□□ -2.37
CLDN12P56749 MIR4711-201ENST00000578274 70 ntBASIC0.25□□□□□ -2.37
CLDN12P56749 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.25□□□□□ -2.37
CLDN12P56749 RMST_3.1-201ENST00000611651 109 ntBASIC0.25□□□□□ -2.37
CLDN12P56749 AC243829.6-201ENST00000612652 106 ntBASIC0.25□□□□□ -2.37
CLDN12P56749 AC093913.1-201ENST00000614178 329 ntBASIC0.25□□□□□ -2.37
CLDN12P56749 AC007014.2-201ENST00000615581 479 ntBASIC0.25□□□□□ -2.37
CLDN12P56749 MIR6515-201ENST00000619843 57 ntBASIC0.25□□□□□ -2.37
CLDN12P56749 AC068787.1-201ENST00000623908 691 ntBASIC0.25□□□□□ -2.37
CLDN12P56749 OR5AK4P-201ENST00000635912 903 ntBASIC0.25□□□□□ -2.37
CLDN12P56749 RNU6-137P-201ENST00000363680 108 ntBASIC0.24□□□□□ -2.37
CLDN12P56749 RNU6-342P-201ENST00000384521 104 ntBASIC0.24□□□□□ -2.37
CLDN12P56749 MTCO3P19-201ENST00000415864 321 ntBASIC0.24□□□□□ -2.37
CLDN12P56749 AC244098.3-201ENST00000424803 96 ntBASIC0.24□□□□□ -2.37
CLDN12P56749 snoU13.25-201ENST00000458945 104 ntBASIC0.24□□□□□ -2.37
CLDN12P56749 SNORD42A-201ENST00000459584 64 ntBASIC0.24□□□□□ -2.37
CLDN12P56749 RNU2-56P-201ENST00000516826 190 ntBASIC0.24□□□□□ -2.37
CLDN12P56749 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.24□□□□□ -2.37
CLDN12P56749 FRG2DP-202ENST00000566967 323 ntBASIC0.24□□□□□ -2.37
CLDN12P56749 MIR548AB-201ENST00000584917 84 ntBASIC0.24□□□□□ -2.37
CLDN12P56749 MIR8076-201ENST00000611401 83 ntBASIC0.24□□□□□ -2.37
CLDN12P56749 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
CLDN12P56749 RNU5F-3P-201ENST00000363767 117 ntBASIC0.23□□□□□ -2.37
CLDN12P56749 RNU6-1317P-201ENST00000364582 104 ntBASIC0.23□□□□□ -2.37
CLDN12P56749 MIR216A-201ENST00000385063 110 ntBASIC0.23□□□□□ -2.37
CLDN12P56749 AL663109.1-201ENST00000411498 844 ntBASIC0.23□□□□□ -2.37
CLDN12P56749 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.23□□□□□ -2.37
CLDN12P56749 AC093850.1-201ENST00000454121 251 ntBASIC0.23□□□□□ -2.37
CLDN12P56749 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.23□□□□□ -2.37
CLDN12P56749 RNU7-180P-201ENST00000459240 63 ntBASIC0.23□□□□□ -2.37
CLDN12P56749 RNU6-341P-201ENST00000516973 96 ntBASIC0.23□□□□□ -2.37
CLDN12P56749 MTND4P7-201ENST00000523876 130 ntBASIC0.23□□□□□ -2.37
CLDN12P56749 AP002004.2-201ENST00000531656 154 ntBASIC0.23□□□□□ -2.37
CLDN12P56749 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.23□□□□□ -2.37
CLDN12P56749 7SK.7-201ENST00000603504 247 ntBASIC0.23□□□□□ -2.37
CLDN12P56749 AC022306.3-201ENST00000619930 550 ntBASIC0.23□□□□□ -2.37
CLDN12P56749 7SK.10-201ENST00000621414 298 ntBASIC0.23□□□□□ -2.37
CLDN12P56749 AC005609.4-201ENST00000625071 447 ntBASIC0.23□□□□□ -2.37
CLDN12P56749 FER-210ENST00000628534 558 ntTSL 5 BASIC0.23□□□□□ -2.37
CLDN12P56749 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
CLDN12P56749 AL390237.1-201ENST00000404226 1415 ntBASIC0.22□□□□□ -2.37
CLDN12P56749 RNU6-1120P-201ENST00000362988 108 ntBASIC0.22□□□□□ -2.37
CLDN12P56749 RNU6-181P-201ENST00000363225 107 ntBASIC0.22□□□□□ -2.37
CLDN12P56749 RNU6-833P-201ENST00000363486 107 ntBASIC0.22□□□□□ -2.37
CLDN12P56749 Y_RNA.269-201ENST00000364685 89 ntBASIC0.22□□□□□ -2.37
CLDN12P56749 RNU6-1327P-201ENST00000365302 105 ntBASIC0.22□□□□□ -2.37
CLDN12P56749 RNU6-1329P-201ENST00000365664 107 ntBASIC0.22□□□□□ -2.37
CLDN12P56749 RNU5A-2P-201ENST00000384337 116 ntBASIC0.22□□□□□ -2.37
CLDN12P56749 AC104332.1-201ENST00000440471 797 ntBASIC0.22□□□□□ -2.37
CLDN12P56749 USP9YP29-201ENST00000445112 563 ntBASIC0.22□□□□□ -2.37
CLDN12P56749 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.22□□□□□ -2.37
CLDN12P56749 AP000870.1-201ENST00000472927 406 ntBASIC0.22□□□□□ -2.37
CLDN12P56749 RPL23AP75-201ENST00000491601 451 ntBASIC0.22□□□□□ -2.37
CLDN12P56749 RNU6-445P-201ENST00000516949 107 ntBASIC0.22□□□□□ -2.37
CLDN12P56749 RNU6-58P-201ENST00000517143 103 ntBASIC0.22□□□□□ -2.37
CLDN12P56749 MRPS36P3-201ENST00000519284 130 ntBASIC0.22□□□□□ -2.37
CLDN12P56749 AP001372.4-201ENST00000524889 472 ntBASIC0.22□□□□□ -2.37
CLDN12P56749 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.22□□□□□ -2.37
CLDN12P56749 RPL21P9-201ENST00000556149 474 ntBASIC0.22□□□□□ -2.37
CLDN12P56749 AL117336.2-201ENST00000602435 335 ntBASIC0.22□□□□□ -2.37
CLDN12P56749 AC064836.2-201ENST00000609491 462 ntBASIC0.22□□□□□ -2.37
CLDN12P56749 AC016597.2-201ENST00000613256 341 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 241.6 ms