Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.76□□□□□ -2.29
CLDN6P56747 AC073349.3-201ENST00000617616 186 ntBASIC0.76□□□□□ -2.29
CLDN6P56747 MIR6835-201ENST00000621552 64 ntBASIC0.76□□□□□ -2.29
CLDN6P56747 Y_RNA.378-201ENST00000365652 113 ntBASIC0.75□□□□□ -2.29
CLDN6P56747 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.75□□□□□ -2.29
CLDN6P56747 RNU6-784P-201ENST00000384330 106 ntBASIC0.75□□□□□ -2.29
CLDN6P56747 MIR660-201ENST00000385235 97 ntBASIC0.75□□□□□ -2.29
CLDN6P56747 SNORA12.1-201ENST00000390873 148 ntBASIC0.75□□□□□ -2.29
CLDN6P56747 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.75□□□□□ -2.29
CLDN6P56747 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.75□□□□□ -2.29
CLDN6P56747 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.75□□□□□ -2.29
CLDN6P56747 AL353193.1-201ENST00000421444 268 ntBASIC0.75□□□□□ -2.29
CLDN6P56747 AC004941.2-201ENST00000427009 228 ntBASIC0.75□□□□□ -2.29
CLDN6P56747 MTCO2P19-201ENST00000427513 598 ntBASIC0.75□□□□□ -2.29
CLDN6P56747 AL606489.2-201ENST00000433886 234 ntBASIC0.75□□□□□ -2.29
CLDN6P56747 RPL23AP75-201ENST00000491601 451 ntBASIC0.75□□□□□ -2.29
CLDN6P56747 MTCO1P29-201ENST00000496868 288 ntBASIC0.75□□□□□ -2.29
CLDN6P56747 RNA5SP401-201ENST00000515920 127 ntBASIC0.75□□□□□ -2.29
CLDN6P56747 RNU7-128P-201ENST00000517247 62 ntBASIC0.75□□□□□ -2.29
CLDN6P56747 MTND1P5-201ENST00000517906 940 ntBASIC0.75□□□□□ -2.29
CLDN6P56747 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.75□□□□□ -2.29
CLDN6P56747 AC004584.2-201ENST00000570407 410 ntBASIC0.75□□□□□ -2.29
CLDN6P56747 MIR4778-201ENST00000577635 80 ntBASIC0.75□□□□□ -2.29
CLDN6P56747 SNORD114-2-201ENST00000363953 78 ntBASIC0.74□□□□□ -2.29
CLDN6P56747 Y_RNA.258-201ENST00000364613 105 ntBASIC0.74□□□□□ -2.29
CLDN6P56747 SNORD114-24-201ENST00000365029 72 ntBASIC0.74□□□□□ -2.29
CLDN6P56747 RNU4-66P-201ENST00000365199 138 ntBASIC0.74□□□□□ -2.29
CLDN6P56747 RNU6-214P-201ENST00000384130 107 ntBASIC0.74□□□□□ -2.29
CLDN6P56747 RNU6-1103P-201ENST00000384150 107 ntBASIC0.74□□□□□ -2.29
CLDN6P56747 SNORD12-201ENST00000391002 90 ntBASIC0.74□□□□□ -2.29
CLDN6P56747 RNU6-1054P-201ENST00000411293 104 ntBASIC0.74□□□□□ -2.29
CLDN6P56747 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.74□□□□□ -2.29
CLDN6P56747 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.74□□□□□ -2.29
CLDN6P56747 AC002429.1-201ENST00000437672 148 ntBASIC0.74□□□□□ -2.29
CLDN6P56747 AC245047.7-201ENST00000440265 293 ntBASIC0.74□□□□□ -2.29
CLDN6P56747 BET1P1-201ENST00000482276 359 ntBASIC0.74□□□□□ -2.29
CLDN6P56747 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.74□□□□□ -2.29
CLDN6P56747 PDCD5P2-201ENST00000507570 312 ntBASIC0.74□□□□□ -2.29
CLDN6P56747 RNU6-947P-201ENST00000516264 106 ntBASIC0.74□□□□□ -2.29
CLDN6P56747 RNA5SP330-201ENST00000517096 96 ntBASIC0.74□□□□□ -2.29
CLDN6P56747 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.74□□□□□ -2.29
CLDN6P56747 AC004812.1-201ENST00000540773 146 ntBASIC0.74□□□□□ -2.29
CLDN6P56747 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.74□□□□□ -2.29
CLDN6P56747 CPDP1-201ENST00000579660 283 ntBASIC0.74□□□□□ -2.29
CLDN6P56747 AC022432.1-201ENST00000595739 310 ntBASIC0.74□□□□□ -2.29
CLDN6P56747 AC007684.1-201ENST00000609671 477 ntBASIC0.74□□□□□ -2.29
CLDN6P56747 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CLDN6P56747 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CLDN6P56747 AP000568.1-201ENST00000282964 442 ntBASIC0.73□□□□□ -2.29
CLDN6P56747 RNU6-1266P-201ENST00000362794 105 ntBASIC0.73□□□□□ -2.29
CLDN6P56747 Y_RNA.124-201ENST00000363339 93 ntBASIC0.73□□□□□ -2.29
CLDN6P56747 RNU6-245P-201ENST00000384020 107 ntBASIC0.73□□□□□ -2.29
CLDN6P56747 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
CLDN6P56747 RNA5SP193-201ENST00000410353 107 ntBASIC0.73□□□□□ -2.29
CLDN6P56747 AL358176.2-201ENST00000425769 204 ntBASIC0.73□□□□□ -2.29
CLDN6P56747 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.73□□□□□ -2.29
CLDN6P56747 AC098934.3-201ENST00000430450 190 ntBASIC0.73□□□□□ -2.29
CLDN6P56747 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.73□□□□□ -2.29
CLDN6P56747 AC117454.1-201ENST00000491120 168 ntBASIC0.73□□□□□ -2.29
CLDN6P56747 SNORD79.1-201ENST00000516069 84 ntBASIC0.73□□□□□ -2.29
CLDN6P56747 RNA5SP54-201ENST00000516951 92 ntBASIC0.73□□□□□ -2.29
CLDN6P56747 MTATP6P24-201ENST00000576835 677 ntBASIC0.73□□□□□ -2.29
CLDN6P56747 AL162424.1-201ENST00000602325 221 ntBASIC0.73□□□□□ -2.29
CLDN6P56747 AC073648.5-201ENST00000603502 305 ntBASIC0.73□□□□□ -2.29
CLDN6P56747 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.73□□□□□ -2.29
CLDN6P56747 U6.73-201ENST00000619194 103 ntBASIC0.73□□□□□ -2.29
CLDN6P56747 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.73□□□□□ -2.29
CLDN6P56747 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
CLDN6P56747 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CLDN6P56747 SNORD87-201ENST00000364849 89 ntBASIC0.72□□□□□ -2.29
CLDN6P56747 RNU2-64P-201ENST00000411315 191 ntBASIC0.72□□□□□ -2.29
CLDN6P56747 MTCO2P16-201ENST00000436962 677 ntBASIC0.72□□□□□ -2.29
CLDN6P56747 STAG3L5P-204ENST00000443759 179 ntBASIC0.72□□□□□ -2.29
CLDN6P56747 RNU7-94P-201ENST00000459576 63 ntBASIC0.72□□□□□ -2.29
CLDN6P56747 Y_RNA.654-201ENST00000497848 106 ntBASIC0.72□□□□□ -2.29
CLDN6P56747 PSMC1P5-201ENST00000512850 177 ntBASIC0.72□□□□□ -2.29
CLDN6P56747 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.72□□□□□ -2.29
CLDN6P56747 RNU6-351P-201ENST00000516097 100 ntBASIC0.72□□□□□ -2.29
CLDN6P56747 RNU7-99P-201ENST00000516271 62 ntBASIC0.72□□□□□ -2.29
CLDN6P56747 SNORA40.12-201ENST00000516329 111 ntBASIC0.72□□□□□ -2.29
CLDN6P56747 AL590705.4-201ENST00000532209 134 ntBASIC0.72□□□□□ -2.29
CLDN6P56747 AC068790.6-201ENST00000602558 258 ntBASIC0.72□□□□□ -2.29
CLDN6P56747 AC080078.2-201ENST00000603766 501 ntBASIC0.72□□□□□ -2.29
CLDN6P56747 AC007742.2-201ENST00000618226 398 ntBASIC0.72□□□□□ -2.29
CLDN6P56747 AL391262.2-201ENST00000622466 494 ntBASIC0.72□□□□□ -2.29
CLDN6P56747 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CLDN6P56747 Y_RNA.1-201ENST00000352915 104 ntBASIC0.71□□□□□ -2.3
CLDN6P56747 RNU6-199P-201ENST00000362954 107 ntBASIC0.71□□□□□ -2.3
CLDN6P56747 SNORD114-23-201ENST00000363536 72 ntBASIC0.71□□□□□ -2.3
CLDN6P56747 RNU6-38P-201ENST00000384085 107 ntBASIC0.71□□□□□ -2.3
CLDN6P56747 SNORD41-201ENST00000386967 70 ntBASIC0.71□□□□□ -2.3
CLDN6P56747 MIR1185-2-201ENST00000408687 86 ntBASIC0.71□□□□□ -2.3
CLDN6P56747 AC114482.1-201ENST00000418010 247 ntBASIC0.71□□□□□ -2.3
CLDN6P56747 USP9YP29-201ENST00000445112 563 ntBASIC0.71□□□□□ -2.3
CLDN6P56747 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.71□□□□□ -2.3
CLDN6P56747 RNU6-1332P-201ENST00000516666 104 ntBASIC0.71□□□□□ -2.3
CLDN6P56747 RNU6-197P-201ENST00000516680 100 ntBASIC0.71□□□□□ -2.3
CLDN6P56747 AC090142.3-201ENST00000519012 385 ntBASIC0.71□□□□□ -2.3
CLDN6P56747 AL121579.1-201ENST00000555129 305 ntBASIC0.71□□□□□ -2.3
CLDN6P56747 AC092807.2-201ENST00000609367 243 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 184 ms