Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC016909.1-201ENST00000415916 166 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.42□□□□□ -2.02
SUMO3P55854 AC096920.1-201ENST00000423991 241 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.42□□□□□ -2.02
SUMO3P55854 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.42□□□□□ -2.02
SUMO3P55854 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.42□□□□□ -2.02
SUMO3P55854 AL109933.2-201ENST00000452651 260 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 SNORD65B-201ENST00000459126 73 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 RN7SL636P-201ENST00000497504 294 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 AC107222.1-201ENST00000510899 637 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 AC096725.1-201ENST00000514266 313 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 RNU6-1146P-201ENST00000516282 102 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 SUMO2P18-201ENST00000518873 252 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.42□□□□□ -2.02
SUMO3P55854 AL161670.1-201ENST00000554348 137 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 GTF3AP2-201ENST00000557014 266 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 MIR3169-201ENST00000578032 83 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 U2.15-201ENST00000611544 191 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 U2.16-201ENST00000613119 191 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 U2.12-201ENST00000613778 191 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 U2.20-201ENST00000613956 192 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 U2.9-201ENST00000615427 191 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 U2.11-201ENST00000616345 191 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 U2.2-201ENST00000616535 191 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 U2.3-201ENST00000617785 191 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 U2.19-201ENST00000618602 191 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 RNU2-1-201ENST00000618664 191 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 U2.6-201ENST00000619225 191 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 U2.5-201ENST00000619465 191 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 U2.10-201ENST00000620268 191 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 AC006435.5-201ENST00000624486 112 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 AC006386.2-201ENST00000624491 75 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 AC012005.1-201ENST00000624575 75 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
SUMO3P55854 Z82195.2-201ENST00000612348 18351 ntBASIC2.41□□□□□ -2.02
SUMO3P55854 SNORA3A-201ENST00000364113 130 ntBASIC2.41□□□□□ -2.02
SUMO3P55854 SNORD115-30-201ENST00000364117 82 ntBASIC2.41□□□□□ -2.02
SUMO3P55854 Y_RNA.556-201ENST00000384677 113 ntBASIC2.41□□□□□ -2.02
SUMO3P55854 U3.40-201ENST00000408706 208 ntBASIC2.41□□□□□ -2.02
SUMO3P55854 AC063976.3-201ENST00000426849 329 ntBASIC2.41□□□□□ -2.02
SUMO3P55854 HSPE1P25-201ENST00000455484 251 ntBASIC2.41□□□□□ -2.02
SUMO3P55854 HMGB3P17-201ENST00000504195 649 ntBASIC2.41□□□□□ -2.02
SUMO3P55854 AC011406.1-201ENST00000512440 370 ntBASIC2.41□□□□□ -2.02
SUMO3P55854 RNU6-966P-201ENST00000516479 104 ntBASIC2.41□□□□□ -2.02
SUMO3P55854 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.41□□□□□ -2.02
SUMO3P55854 MIR5194-201ENST00000582634 120 ntBASIC2.41□□□□□ -2.02
SUMO3P55854 SDR42E1P4-201ENST00000620894 481 ntBASIC2.41□□□□□ -2.02
SUMO3P55854 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SUMO3P55854 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
SUMO3P55854 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.41□□□□□ -2.02
SUMO3P55854 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
SUMO3P55854 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
SUMO3P55854 Y_RNA.84-201ENST00000363011 104 ntBASIC2.4□□□□□ -2.03
SUMO3P55854 SNORD81.1-201ENST00000363064 77 ntBASIC2.4□□□□□ -2.03
SUMO3P55854 RNU6-23P-201ENST00000363283 107 ntBASIC2.4□□□□□ -2.03
SUMO3P55854 RNA5SP393-201ENST00000363423 117 ntBASIC2.4□□□□□ -2.03
SUMO3P55854 Y_RNA.144-201ENST00000363521 113 ntBASIC2.4□□□□□ -2.03
SUMO3P55854 SNORA80A-201ENST00000363922 136 ntBASIC2.4□□□□□ -2.03
SUMO3P55854 Y_RNA.286-201ENST00000364813 102 ntBASIC2.4□□□□□ -2.03
SUMO3P55854 Y_RNA.376-201ENST00000365638 108 ntBASIC2.4□□□□□ -2.03
SUMO3P55854 RNU6-196P-201ENST00000384315 107 ntBASIC2.4□□□□□ -2.03
SUMO3P55854 MIR215-201ENST00000384858 110 ntBASIC2.4□□□□□ -2.03
SUMO3P55854 MIR518A2-201ENST00000384966 87 ntBASIC2.4□□□□□ -2.03
SUMO3P55854 NDUFB4P4-201ENST00000404822 243 ntBASIC2.4□□□□□ -2.03
SUMO3P55854 MIR1253-201ENST00000408273 105 ntBASIC2.4□□□□□ -2.03
SUMO3P55854 MIR1302-6-201ENST00000408466 90 ntBASIC2.4□□□□□ -2.03
SUMO3P55854 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.4□□□□□ -2.03
SUMO3P55854 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.4□□□□□ -2.03
SUMO3P55854 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.4□□□□□ -2.03
SUMO3P55854 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.4□□□□□ -2.03
SUMO3P55854 MIR5092-201ENST00000583139 88 ntBASIC2.4□□□□□ -2.03
SUMO3P55854 AC245884.12-201ENST00000615364 59 ntBASIC2.4□□□□□ -2.03
SUMO3P55854 7SK.10-201ENST00000621414 298 ntBASIC2.4□□□□□ -2.03
SUMO3P55854 AC127459.3-201ENST00000624328 466 ntBASIC2.4□□□□□ -2.03
SUMO3P55854 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.4□□□□□ -2.03
SUMO3P55854 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
SUMO3P55854 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
SUMO3P55854 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SUMO3P55854 Y_RNA.361-201ENST00000365515 120 ntBASIC2.39□□□□□ -2.03
SUMO3P55854 SNORA20B-201ENST00000384220 132 ntBASIC2.39□□□□□ -2.03
SUMO3P55854 RNU6-102P-201ENST00000384485 104 ntBASIC2.39□□□□□ -2.03
SUMO3P55854 AL355796.1-201ENST00000406706 323 ntBASIC2.39□□□□□ -2.03
SUMO3P55854 RNU6-1203P-201ENST00000410703 110 ntBASIC2.39□□□□□ -2.03
SUMO3P55854 BX510359.4-201ENST00000423750 193 ntBASIC2.39□□□□□ -2.03
SUMO3P55854 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.39□□□□□ -2.03
SUMO3P55854 ATP5J2P3-201ENST00000451550 258 ntBASIC2.39□□□□□ -2.03
SUMO3P55854 SNORD109B-201ENST00000458961 67 ntBASIC2.39□□□□□ -2.03
SUMO3P55854 SNORD109A-201ENST00000459128 67 ntBASIC2.39□□□□□ -2.03
SUMO3P55854 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.39□□□□□ -2.03
SUMO3P55854 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SUMO3P55854 RNU6-436P-201ENST00000516171 114 ntBASIC2.39□□□□□ -2.03
SUMO3P55854 AL033523.1-201ENST00000605153 153 ntBASIC2.39□□□□□ -2.03
SUMO3P55854 AL353149.1-201ENST00000610667 244 ntBASIC2.39□□□□□ -2.03
SUMO3P55854 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.39□□□□□ -2.03
SUMO3P55854 FO624990.1-201ENST00000636373 85 ntBASIC2.39□□□□□ -2.03
SUMO3P55854 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SUMO3P55854 RNU6-271P-201ENST00000363858 105 ntBASIC2.38□□□□□ -2.03
SUMO3P55854 SNORA67.1-201ENST00000364749 141 ntBASIC2.38□□□□□ -2.03
SUMO3P55854 RNU6-290P-201ENST00000365212 101 ntBASIC2.38□□□□□ -2.03
SUMO3P55854 RNA5SP465-201ENST00000391195 109 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms