Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 Y_RNA.629-201ENST00000411368 105 ntBASIC2.41□□□□□ -2.02
FOXG1P55316 CR769767.1-201ENST00000436337 346 ntBASIC2.41□□□□□ -2.02
FOXG1P55316 AL135790.2-201ENST00000437701 267 ntBASIC2.41□□□□□ -2.02
FOXG1P55316 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.41□□□□□ -2.02
FOXG1P55316 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.41□□□□□ -2.02
FOXG1P55316 AC103975.1-201ENST00000482506 483 ntBASIC2.41□□□□□ -2.02
FOXG1P55316 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.41□□□□□ -2.02
FOXG1P55316 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
FOXG1P55316 Y_RNA.797-201ENST00000515977 94 ntBASIC2.41□□□□□ -2.02
FOXG1P55316 RNU6-107P-201ENST00000516643 102 ntBASIC2.41□□□□□ -2.02
FOXG1P55316 RNU6-971P-201ENST00000516920 106 ntBASIC2.41□□□□□ -2.02
FOXG1P55316 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.41□□□□□ -2.02
FOXG1P55316 AC021269.2-201ENST00000532318 330 ntBASIC2.41□□□□□ -2.02
FOXG1P55316 MIR4319-201ENST00000577285 85 ntBASIC2.41□□□□□ -2.02
FOXG1P55316 MIR3684-201ENST00000579779 74 ntBASIC2.41□□□□□ -2.02
FOXG1P55316 HMGN2P15-201ENST00000585707 270 ntBASIC2.41□□□□□ -2.02
FOXG1P55316 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.41□□□□□ -2.02
FOXG1P55316 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.41□□□□□ -2.02
FOXG1P55316 SNORD98-201ENST00000636377 67 ntBASIC2.41□□□□□ -2.02
FOXG1P55316 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
FOXG1P55316 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.41□□□□□ -2.02
FOXG1P55316 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
FOXG1P55316 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
FOXG1P55316 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
FOXG1P55316 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
FOXG1P55316 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.4□□□□□ -2.03
FOXG1P55316 RNU4-11P-201ENST00000365287 132 ntBASIC2.4□□□□□ -2.03
FOXG1P55316 Y_RNA.415-201ENST00000384012 112 ntBASIC2.4□□□□□ -2.03
FOXG1P55316 Y_RNA.572-201ENST00000384757 98 ntBASIC2.4□□□□□ -2.03
FOXG1P55316 RNU6-239P-201ENST00000390990 99 ntBASIC2.4□□□□□ -2.03
FOXG1P55316 RNU6-1248P-201ENST00000391096 64 ntBASIC2.4□□□□□ -2.03
FOXG1P55316 RNU6-381P-201ENST00000391259 108 ntBASIC2.4□□□□□ -2.03
FOXG1P55316 RNA5SP390-201ENST00000410191 113 ntBASIC2.4□□□□□ -2.03
FOXG1P55316 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.4□□□□□ -2.03
FOXG1P55316 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.4□□□□□ -2.03
FOXG1P55316 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.4□□□□□ -2.03
FOXG1P55316 AC005840.1-201ENST00000498412 377 ntBASIC2.4□□□□□ -2.03
FOXG1P55316 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.4□□□□□ -2.03
FOXG1P55316 SEM1P1-201ENST00000506694 209 ntBASIC2.4□□□□□ -2.03
FOXG1P55316 RNU2-12P-201ENST00000517216 168 ntBASIC2.4□□□□□ -2.03
FOXG1P55316 AC100767.1-201ENST00000528178 123 ntBASIC2.4□□□□□ -2.03
FOXG1P55316 AC006199.1-201ENST00000548728 219 ntBASIC2.4□□□□□ -2.03
FOXG1P55316 AC025281.1-201ENST00000567026 265 ntBASIC2.4□□□□□ -2.03
FOXG1P55316 AC009127.3-201ENST00000570531 403 ntBASIC2.4□□□□□ -2.03
FOXG1P55316 AC006380.1-201ENST00000603598 186 ntBASIC2.4□□□□□ -2.03
FOXG1P55316 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.4□□□□□ -2.03
FOXG1P55316 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
FOXG1P55316 AC010332.2-201ENST00000613083 1904 ntBASIC2.4□□□□□ -2.03
FOXG1P55316 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
FOXG1P55316 RNU1-62P-201ENST00000362599 164 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 RNU6-1048P-201ENST00000364054 107 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 snoU2_19.4-201ENST00000364329 80 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 SNORD87-201ENST00000364849 89 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 RNU6-275P-201ENST00000364910 107 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 RNU6-245P-201ENST00000384020 107 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 RNU6-44P-201ENST00000384045 107 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 SNORA26.5-201ENST00000391215 123 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 CBX3P9-201ENST00000402326 552 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.39□□□□□ -2.03
FOXG1P55316 SNORD109B-201ENST00000458961 67 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 SNORD109A-201ENST00000459128 67 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 AC114982.1-201ENST00000469402 321 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 AIG1P1-201ENST00000503376 148 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 SNORA25.12-201ENST00000516202 82 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 RNU6-1234P-201ENST00000516877 103 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 SNORD19.2-201ENST00000516978 73 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 AC022616.8-201ENST00000533569 253 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.39□□□□□ -2.03
FOXG1P55316 CYP4A27P-201ENST00000567218 190 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 MIR548X2-201ENST00000579776 100 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 AC069294.1-201ENST00000608397 350 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 MIR3658-201ENST00000636291 56 ntBASIC2.39□□□□□ -2.03
FOXG1P55316 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
FOXG1P55316 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.39□□□□□ -2.03
FOXG1P55316 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.39□□□□□ -2.03
FOXG1P55316 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
FOXG1P55316 AL391516.1-201ENST00000554380 2449 ntBASIC2.38□□□□□ -2.03
FOXG1P55316 AC062016.1-201ENST00000355719 319 ntBASIC2.38□□□□□ -2.03
FOXG1P55316 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
FOXG1P55316 Y_RNA.71-201ENST00000362892 104 ntBASIC2.38□□□□□ -2.03
FOXG1P55316 RNA5SP205-201ENST00000364653 136 ntBASIC2.38□□□□□ -2.03
FOXG1P55316 Y_RNA.353-201ENST00000365440 108 ntBASIC2.38□□□□□ -2.03
FOXG1P55316 Y_RNA.510-201ENST00000384511 114 ntBASIC2.38□□□□□ -2.03
FOXG1P55316 SNORA40-201ENST00000388090 126 ntBASIC2.38□□□□□ -2.03
FOXG1P55316 RNU6-578P-201ENST00000390980 103 ntBASIC2.38□□□□□ -2.03
FOXG1P55316 RNA5SP354-201ENST00000391247 136 ntBASIC2.38□□□□□ -2.03
FOXG1P55316 RNA5SP21-201ENST00000410917 96 ntBASIC2.38□□□□□ -2.03
FOXG1P55316 AC004866.1-201ENST00000411748 78 ntBASIC2.38□□□□□ -2.03
FOXG1P55316 MTND4LP9-201ENST00000427694 174 ntBASIC2.38□□□□□ -2.03
FOXG1P55316 AC008267.6-201ENST00000441664 139 ntBASIC2.38□□□□□ -2.03
FOXG1P55316 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.38□□□□□ -2.03
FOXG1P55316 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.38□□□□□ -2.03
FOXG1P55316 RNU5F-2P-201ENST00000516066 82 ntBASIC2.38□□□□□ -2.03
FOXG1P55316 RNU7-121P-201ENST00000516604 62 ntBASIC2.38□□□□□ -2.03
FOXG1P55316 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.38□□□□□ -2.03
FOXG1P55316 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.38□□□□□ -2.03
FOXG1P55316 MIR4744-201ENST00000581563 82 ntBASIC2.38□□□□□ -2.03
FOXG1P55316 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
FOXG1P55316 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms