Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 AC006380.1-201ENST00000603598 186 ntBASIC2.94□□□□□ -1.94
NEK4P51957 snoZ196.1-201ENST00000625269 89 ntBASIC2.94□□□□□ -1.94
NEK4P51957 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NEK4P51957 Y_RNA.243-201ENST00000364481 109 ntBASIC2.93□□□□□ -1.94
NEK4P51957 Y_RNA.383-201ENST00000383855 97 ntBASIC2.93□□□□□ -1.94
NEK4P51957 MIR27B-201ENST00000385129 97 ntBASIC2.93□□□□□ -1.94
NEK4P51957 AC123900.1-201ENST00000420390 96 ntBASIC2.93□□□□□ -1.94
NEK4P51957 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.93□□□□□ -1.94
NEK4P51957 MTCO1P44-201ENST00000441935 243 ntBASIC2.93□□□□□ -1.94
NEK4P51957 AC016717.1-201ENST00000448918 286 ntBASIC2.93□□□□□ -1.94
NEK4P51957 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.93□□□□□ -1.94
NEK4P51957 RNU6-221P-201ENST00000459541 99 ntBASIC2.93□□□□□ -1.94
NEK4P51957 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.93□□□□□ -1.94
NEK4P51957 MTND1P19-201ENST00000511780 315 ntBASIC2.93□□□□□ -1.94
NEK4P51957 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.93□□□□□ -1.94
NEK4P51957 AC025754.2-201ENST00000606491 432 ntBASIC2.93□□□□□ -1.94
NEK4P51957 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.93□□□□□ -1.94
NEK4P51957 AL365361.1-201ENST00000566942 3481 ntBASIC2.93□□□□□ -1.94
NEK4P51957 AC135776.4-201ENST00000624300 1904 ntBASIC2.93□□□□□ -1.94
NEK4P51957 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.93□□□□□ -1.94
NEK4P51957 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.93□□□□□ -1.94
NEK4P51957 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NEK4P51957 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.92□□□□□ -1.94
NEK4P51957 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
NEK4P51957 MIR21-201ENST00000362134 72 ntBASIC2.92□□□□□ -1.94
NEK4P51957 Y_RNA.136-201ENST00000363444 102 ntBASIC2.92□□□□□ -1.94
NEK4P51957 RNU6-418P-201ENST00000384035 107 ntBASIC2.92□□□□□ -1.94
NEK4P51957 RNU6-1235P-201ENST00000384559 107 ntBASIC2.92□□□□□ -1.94
NEK4P51957 RNU6-1072P-201ENST00000384703 107 ntBASIC2.92□□□□□ -1.94
NEK4P51957 RNU6-443P-201ENST00000384780 107 ntBASIC2.92□□□□□ -1.94
NEK4P51957 SNORA53-201ENST00000391141 249 ntBASIC2.92□□□□□ -1.94
NEK4P51957 POLR2KP2-201ENST00000438155 177 ntBASIC2.92□□□□□ -1.94
NEK4P51957 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.92□□□□□ -1.94
NEK4P51957 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.92□□□□□ -1.94
NEK4P51957 PRELID3BP1-201ENST00000457142 540 ntBASIC2.92□□□□□ -1.94
NEK4P51957 RNU6-498P-201ENST00000459468 107 ntBASIC2.92□□□□□ -1.94
NEK4P51957 SERF1AP1-201ENST00000514575 187 ntBASIC2.92□□□□□ -1.94
NEK4P51957 RNU2-34P-201ENST00000516534 121 ntBASIC2.92□□□□□ -1.94
NEK4P51957 RNU2-31P-201ENST00000516954 155 ntBASIC2.92□□□□□ -1.94
NEK4P51957 AL137847.3-201ENST00000611521 109 ntBASIC2.92□□□□□ -1.94
NEK4P51957 U6.115-201ENST00000636045 103 ntBASIC2.92□□□□□ -1.94
NEK4P51957 SNORD115-30-201ENST00000364117 82 ntBASIC2.91□□□□□ -1.94
NEK4P51957 MIR23A-201ENST00000385245 73 ntBASIC2.91□□□□□ -1.94
NEK4P51957 U3.40-201ENST00000408706 208 ntBASIC2.91□□□□□ -1.94
NEK4P51957 SRIP3-201ENST00000413200 219 ntBASIC2.91□□□□□ -1.94
NEK4P51957 AC010531.2-201ENST00000465012 153 ntBASIC2.91□□□□□ -1.94
NEK4P51957 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.91□□□□□ -1.94
NEK4P51957 RNU6-436P-201ENST00000516171 114 ntBASIC2.91□□□□□ -1.94
NEK4P51957 RNA5SP320-201ENST00000516263 124 ntBASIC2.91□□□□□ -1.94
NEK4P51957 Y_RNA.680-201ENST00000516441 93 ntBASIC2.91□□□□□ -1.94
NEK4P51957 SCARNA24.2-201ENST00000516968 130 ntBASIC2.91□□□□□ -1.94
NEK4P51957 MIR3684-201ENST00000579779 74 ntBASIC2.91□□□□□ -1.94
NEK4P51957 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.91□□□□□ -1.94
NEK4P51957 AC005828.6-201ENST00000606610 232 ntBASIC2.91□□□□□ -1.94
NEK4P51957 MIR340-201ENST00000362125 95 ntBASIC2.9□□□□□ -1.95
NEK4P51957 RNU1-51P-201ENST00000365345 176 ntBASIC2.9□□□□□ -1.95
NEK4P51957 Y_RNA.418-201ENST00000384029 102 ntBASIC2.9□□□□□ -1.95
NEK4P51957 SNORD14D-201ENST00000384390 87 ntBASIC2.9□□□□□ -1.95
NEK4P51957 RNA5SP492-201ENST00000411330 114 ntBASIC2.9□□□□□ -1.95
NEK4P51957 RNU6-57P-201ENST00000411348 103 ntBASIC2.9□□□□□ -1.95
NEK4P51957 Z92545.1-201ENST00000411782 234 ntBASIC2.9□□□□□ -1.95
NEK4P51957 AC025750.2-201ENST00000442609 450 ntBASIC2.9□□□□□ -1.95
NEK4P51957 RNU7-26P-201ENST00000458980 63 ntBASIC2.9□□□□□ -1.95
NEK4P51957 MIR3200-201ENST00000580767 85 ntBASIC2.9□□□□□ -1.95
NEK4P51957 MIR3128-201ENST00000581957 66 ntBASIC2.9□□□□□ -1.95
NEK4P51957 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.9□□□□□ -1.95
NEK4P51957 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.9□□□□□ -1.95
NEK4P51957 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
NEK4P51957 Y_RNA.361-201ENST00000365515 120 ntBASIC2.89□□□□□ -1.95
NEK4P51957 Y_RNA.476-201ENST00000384347 108 ntBASIC2.89□□□□□ -1.95
NEK4P51957 Y_RNA.489-201ENST00000384410 101 ntBASIC2.89□□□□□ -1.95
NEK4P51957 MIR548H3-201ENST00000408771 118 ntBASIC2.89□□□□□ -1.95
NEK4P51957 AL357134.1-201ENST00000445848 426 ntBASIC2.89□□□□□ -1.95
NEK4P51957 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.89□□□□□ -1.95
NEK4P51957 MRPS10P1-201ENST00000448483 130 ntBASIC2.89□□□□□ -1.95
NEK4P51957 MTND4LP30-201ENST00000454092 297 ntBASIC2.89□□□□□ -1.95
NEK4P51957 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.89□□□□□ -1.95
NEK4P51957 RPPH1-2P-201ENST00000516688 293 ntBASIC2.89□□□□□ -1.95
NEK4P51957 AC087441.2-201ENST00000529141 262 ntBASIC2.89□□□□□ -1.95
NEK4P51957 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NEK4P51957 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NEK4P51957 RNU6-379P-201ENST00000363813 104 ntBASIC2.88□□□□□ -1.95
NEK4P51957 Y_RNA.352-201ENST00000365439 102 ntBASIC2.88□□□□□ -1.95
NEK4P51957 Y_RNA.416-201ENST00000384014 113 ntBASIC2.88□□□□□ -1.95
NEK4P51957 Y_RNA.478-201ENST00000384358 107 ntBASIC2.88□□□□□ -1.95
NEK4P51957 AC063976.3-201ENST00000426849 329 ntBASIC2.88□□□□□ -1.95
NEK4P51957 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.88□□□□□ -1.95
NEK4P51957 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
NEK4P51957 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.88□□□□□ -1.95
NEK4P51957 RNU6-1023P-201ENST00000516137 106 ntBASIC2.88□□□□□ -1.95
NEK4P51957 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.88□□□□□ -1.95
NEK4P51957 CYCSP26-201ENST00000534107 320 ntBASIC2.88□□□□□ -1.95
NEK4P51957 AC005000.2-201ENST00000605468 310 ntBASIC2.88□□□□□ -1.95
NEK4P51957 AC037487.3-201ENST00000606668 112 ntBASIC2.88□□□□□ -1.95
NEK4P51957 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
NEK4P51957 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
NEK4P51957 Y_RNA.329-201ENST00000365209 107 ntBASIC2.87□□□□□ -1.95
NEK4P51957 Y_RNA.477-201ENST00000384352 108 ntBASIC2.87□□□□□ -1.95
NEK4P51957 MIR518C-201ENST00000384822 101 ntBASIC2.87□□□□□ -1.95
NEK4P51957 AL031003.1-201ENST00000404229 172 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms