Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RN7SKP179-201ENST00000516126 217 ntBASIC3.6□□□□□ -1.83
USP11P51784 RNA5SP380-201ENST00000517190 98 ntBASIC3.6□□□□□ -1.83
USP11P51784 AC025281.1-201ENST00000567026 265 ntBASIC3.6□□□□□ -1.83
USP11P51784 MIR4474-201ENST00000579189 78 ntBASIC3.6□□□□□ -1.83
USP11P51784 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.6□□□□□ -1.83
USP11P51784 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.6□□□□□ -1.83
USP11P51784 RNU6-91P-201ENST00000607774 107 ntBASIC3.6□□□□□ -1.83
USP11P51784 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.6□□□□□ -1.83
USP11P51784 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
USP11P51784 CENPCP1-201ENST00000533085 2578 ntBASIC3.59□□□□□ -1.83
USP11P51784 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
USP11P51784 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
USP11P51784 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
USP11P51784 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.59□□□□□ -1.83
USP11P51784 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
USP11P51784 RNU6-235P-201ENST00000362644 107 ntBASIC3.59□□□□□ -1.83
USP11P51784 Y_RNA.124-201ENST00000363339 93 ntBASIC3.59□□□□□ -1.83
USP11P51784 MIR634-201ENST00000385208 97 ntBASIC3.59□□□□□ -1.83
USP11P51784 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.59□□□□□ -1.83
USP11P51784 AC245291.1-201ENST00000419501 328 ntBASIC3.59□□□□□ -1.83
USP11P51784 SNRPGP8-201ENST00000454064 226 ntBASIC3.59□□□□□ -1.83
USP11P51784 RPS29P2-201ENST00000479278 136 ntBASIC3.59□□□□□ -1.83
USP11P51784 SNORA64.4-201ENST00000516632 81 ntBASIC3.59□□□□□ -1.83
USP11P51784 SNORD19.2-201ENST00000516978 73 ntBASIC3.59□□□□□ -1.83
USP11P51784 SCARNA20.6-201ENST00000517251 106 ntBASIC3.59□□□□□ -1.83
USP11P51784 AC090049.2-201ENST00000550377 109 ntBASIC3.59□□□□□ -1.83
USP11P51784 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.59□□□□□ -1.83
USP11P51784 AL670379.2-201ENST00000604983 252 ntBASIC3.59□□□□□ -1.83
USP11P51784 MIR8057-201ENST00000620957 69 ntBASIC3.59□□□□□ -1.83
USP11P51784 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.59□□□□□ -1.83
USP11P51784 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
USP11P51784 MTND5P32-201ENST00000560711 1802 ntBASIC3.58□□□□□ -1.84
USP11P51784 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.58□□□□□ -1.84
USP11P51784 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.58□□□□□ -1.84
USP11P51784 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.58□□□□□ -1.84
USP11P51784 FAM35CP-201ENST00000554755 2470 ntBASIC3.58□□□□□ -1.84
USP11P51784 MIR367-201ENST00000362299 68 ntBASIC3.58□□□□□ -1.84
USP11P51784 RNA5SP383-201ENST00000362934 120 ntBASIC3.58□□□□□ -1.84
USP11P51784 SNORD56.3-201ENST00000363507 71 ntBASIC3.58□□□□□ -1.84
USP11P51784 RNU6-1336P-201ENST00000383886 109 ntBASIC3.58□□□□□ -1.84
USP11P51784 SNORA75.5-201ENST00000391291 81 ntBASIC3.58□□□□□ -1.84
USP11P51784 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.58□□□□□ -1.84
USP11P51784 RNU2-49P-201ENST00000410666 184 ntBASIC3.58□□□□□ -1.84
USP11P51784 AC010099.1-201ENST00000455434 375 ntBASIC3.58□□□□□ -1.84
USP11P51784 RPS3P1-201ENST00000456781 192 ntBASIC3.58□□□□□ -1.84
USP11P51784 RPS27P29-201ENST00000463110 252 ntBASIC3.58□□□□□ -1.84
USP11P51784 RNU7-115P-201ENST00000516433 55 ntBASIC3.58□□□□□ -1.84
USP11P51784 RNU6-589P-201ENST00000516485 107 ntBASIC3.58□□□□□ -1.84
USP11P51784 RNA5SP170-201ENST00000517150 101 ntBASIC3.58□□□□□ -1.84
USP11P51784 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.58□□□□□ -1.84
USP11P51784 MIR3613-201ENST00000579844 87 ntBASIC3.58□□□□□ -1.84
USP11P51784 AL031274.2-201ENST00000599419 203 ntBASIC3.58□□□□□ -1.84
USP11P51784 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.58□□□□□ -1.84
USP11P51784 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.58□□□□□ -1.84
USP11P51784 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.58□□□□□ -1.84
USP11P51784 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.58□□□□□ -1.84
USP11P51784 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USP11P51784 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
USP11P51784 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.58□□□□□ -1.84
USP11P51784 SNORD114-19-201ENST00000363072 75 ntBASIC3.57□□□□□ -1.84
USP11P51784 RNU6-755P-201ENST00000364400 103 ntBASIC3.57□□□□□ -1.84
USP11P51784 SNORD15B-201ENST00000384714 146 ntBASIC3.57□□□□□ -1.84
USP11P51784 SNORA12-201ENST00000391162 147 ntBASIC3.57□□□□□ -1.84
USP11P51784 SNORA36B-201ENST00000410438 131 ntBASIC3.57□□□□□ -1.84
USP11P51784 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.57□□□□□ -1.84
USP11P51784 AL365496.1-201ENST00000426885 215 ntBASIC3.57□□□□□ -1.84
USP11P51784 HSPE1P21-201ENST00000438283 308 ntBASIC3.57□□□□□ -1.84
USP11P51784 AC012493.2-201ENST00000595083 291 ntBASIC3.57□□□□□ -1.84
USP11P51784 MIR548AY-201ENST00000617669 107 ntBASIC3.57□□□□□ -1.84
USP11P51784 MIR4679-1-201ENST00000637619 75 ntBASIC3.57□□□□□ -1.84
USP11P51784 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
USP11P51784 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.56□□□□□ -1.84
USP11P51784 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USP11P51784 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USP11P51784 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.56□□□□□ -1.84
USP11P51784 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USP11P51784 RNU6-1255P-201ENST00000363434 112 ntBASIC3.56□□□□□ -1.84
USP11P51784 SNORA25.7-201ENST00000364375 127 ntBASIC3.56□□□□□ -1.84
USP11P51784 RNU6-198P-201ENST00000384258 104 ntBASIC3.56□□□□□ -1.84
USP11P51784 SNORA40.5-201ENST00000391061 128 ntBASIC3.56□□□□□ -1.84
USP11P51784 RNA5SP252-201ENST00000391131 119 ntBASIC3.56□□□□□ -1.84
USP11P51784 Y_RNA.622-201ENST00000411091 108 ntBASIC3.56□□□□□ -1.84
USP11P51784 AC016925.1-201ENST00000458303 298 ntBASIC3.56□□□□□ -1.84
USP11P51784 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.56□□□□□ -1.84
USP11P51784 RNA5SP217-201ENST00000515959 91 ntBASIC3.56□□□□□ -1.84
USP11P51784 SNORA70.12-201ENST00000516084 153 ntBASIC3.56□□□□□ -1.84
USP11P51784 RNU1-143P-201ENST00000516296 146 ntBASIC3.56□□□□□ -1.84
USP11P51784 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.56□□□□□ -1.84
USP11P51784 UBL5P2-201ENST00000583788 219 ntBASIC3.56□□□□□ -1.84
USP11P51784 AC120024.3-201ENST00000603167 156 ntBASIC3.56□□□□□ -1.84
USP11P51784 U1.23-201ENST00000610293 146 ntBASIC3.56□□□□□ -1.84
USP11P51784 RNU1-68P-201ENST00000615382 146 ntBASIC3.56□□□□□ -1.84
USP11P51784 U1.39-201ENST00000621562 146 ntBASIC3.56□□□□□ -1.84
USP11P51784 MIR3914-2-201ENST00000637339 95 ntBASIC3.56□□□□□ -1.84
USP11P51784 AC068647.2-201ENST00000637380 353 ntBASIC3.56□□□□□ -1.84
USP11P51784 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.56□□□□□ -1.84
USP11P51784 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USP11P51784 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
USP11P51784 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
USP11P51784 snoU2_19.1-201ENST00000362361 80 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms