Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 SNORA27.4-201ENST00000516650 95 ntBASIC3.15□□□□□ -1.91
MRE11P49959 Y_RNA.777-201ENST00000516982 102 ntBASIC3.15□□□□□ -1.91
MRE11P49959 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.15□□□□□ -1.91
MRE11P49959 MIR3923-201ENST00000579521 83 ntBASIC3.15□□□□□ -1.91
MRE11P49959 Y_RNA.771-201ENST00000598668 102 ntBASIC3.15□□□□□ -1.91
MRE11P49959 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.15□□□□□ -1.91
MRE11P49959 AL034555.1-201ENST00000604816 211 ntBASIC3.15□□□□□ -1.91
MRE11P49959 Y_RNA.789-201ENST00000622480 102 ntBASIC3.15□□□□□ -1.91
MRE11P49959 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.15□□□□□ -1.91
MRE11P49959 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
MRE11P49959 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.14□□□□□ -1.91
MRE11P49959 SNORA46.1-201ENST00000391069 153 ntBASIC3.14□□□□□ -1.91
MRE11P49959 ELOCP21-201ENST00000412558 336 ntBASIC3.14□□□□□ -1.91
MRE11P49959 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.14□□□□□ -1.91
MRE11P49959 AC005042.3-201ENST00000453230 174 ntBASIC3.14□□□□□ -1.91
MRE11P49959 snoU13.14-201ENST00000459372 104 ntBASIC3.14□□□□□ -1.91
MRE11P49959 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.14□□□□□ -1.91
MRE11P49959 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.14□□□□□ -1.91
MRE11P49959 ZNF861P-201ENST00000588126 639 ntBASIC3.14□□□□□ -1.91
MRE11P49959 Z83818.1-201ENST00000603584 150 ntBASIC3.14□□□□□ -1.91
MRE11P49959 AL137847.3-201ENST00000611521 109 ntBASIC3.14□□□□□ -1.91
MRE11P49959 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.14□□□□□ -1.91
MRE11P49959 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.13□□□□□ -1.91
MRE11P49959 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
MRE11P49959 RNU1-62P-201ENST00000362599 164 ntBASIC3.13□□□□□ -1.91
MRE11P49959 RNU6-545P-201ENST00000362681 104 ntBASIC3.13□□□□□ -1.91
MRE11P49959 SNORA72.2-201ENST00000365028 127 ntBASIC3.13□□□□□ -1.91
MRE11P49959 Y_RNA.464-201ENST00000384282 110 ntBASIC3.13□□□□□ -1.91
MRE11P49959 RNU6-378P-201ENST00000384324 107 ntBASIC3.13□□□□□ -1.91
MRE11P49959 Y_RNA.498-201ENST00000384460 102 ntBASIC3.13□□□□□ -1.91
MRE11P49959 MIR7-2-201ENST00000384970 110 ntBASIC3.13□□□□□ -1.91
MRE11P49959 MIR147B-201ENST00000390185 80 ntBASIC3.13□□□□□ -1.91
MRE11P49959 RNU6-750P-201ENST00000390946 107 ntBASIC3.13□□□□□ -1.91
MRE11P49959 FO393413.1-201ENST00000402892 195 ntBASIC3.13□□□□□ -1.91
MRE11P49959 RN7SKP192-201ENST00000411291 327 ntBASIC3.13□□□□□ -1.91
MRE11P49959 AC096649.2-201ENST00000416186 393 ntBASIC3.13□□□□□ -1.91
MRE11P49959 AIMP1P2-201ENST00000425294 312 ntBASIC3.13□□□□□ -1.91
MRE11P49959 RAB28P5-201ENST00000427490 651 ntBASIC3.13□□□□□ -1.91
MRE11P49959 AL441985.1-201ENST00000457727 251 ntBASIC3.13□□□□□ -1.91
MRE11P49959 RPL23AP70-201ENST00000483361 460 ntBASIC3.13□□□□□ -1.91
MRE11P49959 RPS27P26-201ENST00000494583 239 ntBASIC3.13□□□□□ -1.91
MRE11P49959 Y_RNA.679-201ENST00000516416 91 ntBASIC3.13□□□□□ -1.91
MRE11P49959 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.13□□□□□ -1.91
MRE11P49959 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.13□□□□□ -1.91
MRE11P49959 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
MRE11P49959 MAPK10-266ENST00000641066 6555 ntBASIC3.13□□□□□ -1.91
MRE11P49959 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MRE11P49959 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
MRE11P49959 Z82195.2-201ENST00000612348 18351 ntBASIC3.13□□□□□ -1.91
MRE11P49959 Y_RNA.101-201ENST00000363154 102 ntBASIC3.12□□□□□ -1.91
MRE11P49959 RNU6-682P-201ENST00000363843 106 ntBASIC3.12□□□□□ -1.91
MRE11P49959 RNU6-1289P-201ENST00000384431 106 ntBASIC3.12□□□□□ -1.91
MRE11P49959 MIR489-201ENST00000384923 84 ntBASIC3.12□□□□□ -1.91
MRE11P49959 RNA5SP201-201ENST00000410316 124 ntBASIC3.12□□□□□ -1.91
MRE11P49959 RNU2-52P-201ENST00000410680 190 ntBASIC3.12□□□□□ -1.91
MRE11P49959 COX6CP10-201ENST00000416832 224 ntBASIC3.12□□□□□ -1.91
MRE11P49959 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.12□□□□□ -1.91
MRE11P49959 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.12□□□□□ -1.91
MRE11P49959 UBBP3-201ENST00000445497 241 ntBASIC3.12□□□□□ -1.91
MRE11P49959 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.12□□□□□ -1.91
MRE11P49959 AL391813.1-201ENST00000603098 260 ntBASIC3.12□□□□□ -1.91
MRE11P49959 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.12□□□□□ -1.91
MRE11P49959 AC004467.1-201ENST00000615678 330 ntBASIC3.12□□□□□ -1.91
MRE11P49959 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.12□□□□□ -1.91
MRE11P49959 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
MRE11P49959 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.11□□□□□ -1.91
MRE11P49959 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.11□□□□□ -1.91
MRE11P49959 SNORD114-19-201ENST00000363072 75 ntBASIC3.11□□□□□ -1.91
MRE11P49959 RNU6-727P-201ENST00000363592 107 ntBASIC3.11□□□□□ -1.91
MRE11P49959 Y_RNA.796-201ENST00000364268 102 ntBASIC3.11□□□□□ -1.91
MRE11P49959 RNU6-1180P-201ENST00000364935 107 ntBASIC3.11□□□□□ -1.91
MRE11P49959 Y_RNA.799-201ENST00000364992 102 ntBASIC3.11□□□□□ -1.91
MRE11P49959 RNU6-47P-201ENST00000383866 107 ntBASIC3.11□□□□□ -1.91
MRE11P49959 MIR627-201ENST00000384979 97 ntBASIC3.11□□□□□ -1.91
MRE11P49959 MIR320B2-201ENST00000408479 138 ntBASIC3.11□□□□□ -1.91
MRE11P49959 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.11□□□□□ -1.91
MRE11P49959 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.11□□□□□ -1.91
MRE11P49959 AC009237.7-201ENST00000447357 229 ntBASIC3.11□□□□□ -1.91
MRE11P49959 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.11□□□□□ -1.91
MRE11P49959 SNORD2.1-201ENST00000458762 69 ntBASIC3.11□□□□□ -1.91
MRE11P49959 SNORD109B-201ENST00000458961 67 ntBASIC3.11□□□□□ -1.91
MRE11P49959 SNORD109A-201ENST00000459128 67 ntBASIC3.11□□□□□ -1.91
MRE11P49959 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.11□□□□□ -1.91
MRE11P49959 RNU6-406P-201ENST00000516470 107 ntBASIC3.11□□□□□ -1.91
MRE11P49959 AC087441.2-201ENST00000529141 262 ntBASIC3.11□□□□□ -1.91
MRE11P49959 SNRPGP20-201ENST00000604477 205 ntBASIC3.11□□□□□ -1.91
MRE11P49959 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.11□□□□□ -1.91
MRE11P49959 PCGEM1.1-201ENST00000613431 131 ntBASIC3.11□□□□□ -1.91
MRE11P49959 UCA1.1-201ENST00000620952 75 ntBASIC3.11□□□□□ -1.91
MRE11P49959 AC091932.3-201ENST00000624223 323 ntBASIC3.11□□□□□ -1.91
MRE11P49959 RNU6-1020P-201ENST00000363684 107 ntBASIC3.1□□□□□ -1.91
MRE11P49959 RNU1-109P-201ENST00000383960 147 ntBASIC3.1□□□□□ -1.91
MRE11P49959 SNORA18.3-201ENST00000384122 132 ntBASIC3.1□□□□□ -1.91
MRE11P49959 RNU6-1199P-201ENST00000411249 104 ntBASIC3.1□□□□□ -1.91
MRE11P49959 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.1□□□□□ -1.91
MRE11P49959 AL121594.1-201ENST00000475906 575 ntBASIC3.1□□□□□ -1.91
MRE11P49959 AC083906.5-201ENST00000503722 328 ntBASIC3.1□□□□□ -1.91
MRE11P49959 SNORA31.11-201ENST00000516528 139 ntBASIC3.1□□□□□ -1.91
MRE11P49959 RNU6-861P-201ENST00000516745 106 ntBASIC3.1□□□□□ -1.91
MRE11P49959 RNU6-1212P-201ENST00000517023 104 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms